RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 IGLC6P0CF74 106 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 HMGA1P17096 107 aaKnown RBP2.38□□□□□ -2.03
CRNDE-208ENST00000560029 CD52P31358 61 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 ZNF137PP52743 207 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 RPS28P62857 69 aaKnown RBP2.38□□□□□ -2.03
CRNDE-208ENST00000560029 HERVK_113P63121 156 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 GNG5P63218 68 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 UBE2L3P68036 154 aaKnown RBP2.38□□□□□ -2.03
CRNDE-208ENST00000560029 TMEM155Q4W5P6 130 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 ANKRD29Q8N6D5 301 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 IFI27L1Q96BM0 104 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 LINC01587Q99440 93 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 V9GYY9 64 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 THADAQ6YHU6 1953 aa2.38□□□□□ -2.03
CRNDE-208ENST00000560029 SHANK1Q9Y566 2161 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 SCN3AQ9NY46 2000 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 MDC1Q14676 2089 aaKnown RBP2.37□□□□□ -2.03
CRNDE-208ENST00000560029 TRBV25-1A0A075B6N4 114 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 LOC107984640A0A0U1RRK4 108 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 MYMXA0A1B0GTQ4 84 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 A0A1W2PQD3 144 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 H3BMM0 161 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 UQCRQO14949 82 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 DPM2O94777 84 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 NPYP01303 97 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 IGKCP01834 107 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 TRACP01848 142 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 CECR9P0C854 216 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 COL8A2P25067 703 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 DSCR4P56555 118 aaPredicted RBP2.37□□□□□ -2.03
CRNDE-208ENST00000560029 TMEM258P61165 79 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 SPRNQ5BIV9 151 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 GDF5OSQ5U4N7 250 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 VN1R4Q7Z5H5 301 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 LINC00596Q86U02 117 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 PDPNQ86YL7 162 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 ZCCHC24Q8N2G6 241 aaKnown RBP2.37□□□□□ -2.03
CRNDE-208ENST00000560029 C3orf56Q8N813 242 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 OR11H6Q8NGC7 330 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 ZNRF2Q8NHG8 242 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 FAM57AQ8TBR7 257 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 SLC37A2Q8TED4 501 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 UBE2WQ96B02 151 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 CARD19Q96LW7 228 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 MGST2Q99735 147 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 ZNF492Q9P255 531 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 PRO0628Q9UI54 55 aa2.37□□□□□ -2.03
CRNDE-208ENST00000560029 AMMECR1Q9Y4X0 333 aaPredicted RBP2.37□□□□□ -2.03
CRNDE-208ENST00000560029 CHCHD2Q9Y6H1 151 aaPredicted RBP2.37□□□□□ -2.03
CRNDE-208ENST00000560029 TRPM6Q9BX84 2022 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 HIVEP2P31629 2446 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 LOC389332A0A1B0GUA5 103 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 FAM236AA0A1B0GUQ0 79 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 A0A1B0GUT8 65 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 FAM236BA0A1B0GV22 79 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 TINCRA0A1B0GVN0 87 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 LINC01549A6NIU2 74 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 H0YGG7 62 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 J3QLI3 93 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 SLC25A20O43772 301 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 COX7A2P2O60397 106 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 IGLV3-1P01715 115 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 LGALS1P09382 135 aaKnown RBP2.36□□□□□ -2.03
CRNDE-208ENST00000560029 C8orf88P0DMB2 117 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 PLGLB1Q02325 96 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 ZNF56Q15929 161 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 SPINK9Q5DT21 86 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 TMEM170BQ5T4T1 132 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 HES3Q5TGS1 186 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 SCGB1D4Q6XE38 83 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 MIR17HGQ75NE6 70 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 AMN1Q8IY45 258 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 GATD1Q8NB37 220 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 LINC00526Q96FQ7 95 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 FMC1Q96HJ9 113 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 COX14Q96I36 57 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 NABP2Q9BQ15 211 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 SND1-IT1Q9HBX3 110 aa2.36□□□□□ -2.03
CRNDE-208ENST00000560029 DOCK3Q8IZD9 2030 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 SEC16AO15027 2179 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 IGKV1D-43A0A0B4J1Z2 117 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 TRBV7-7A0A0K0K1E9 115 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 A0A1W2PNN7 141 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 OOSP1A8MZH6 123 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 M0R2P5 195 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 TCL1BO95988 128 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 LTAP01374 205 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 CRYGDP07320 174 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 CD7P09564 240 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 CYBAP13498 195 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 CD24P25063 80 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 PLNP26678 52 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 CNTFRP26992 372 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 IFI27P40305 119 aaPredicted RBP2.35□□□□□ -2.03
CRNDE-208ENST00000560029 FGF12P61328 243 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 ATXN8Q156A1 80 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 HRCT1Q6UXD1 115 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 SBSPONQ8IVN8 264 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 MYOZ3Q8TDC0 251 aa2.35□□□□□ -2.03
CRNDE-208ENST00000560029 RTL8AQ9BWD3 113 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms