RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 TPT1P13693 172 aaKnown RBP13.71□□□□□ -0.21
CHRNA3-207ENST00000559941 SFRP2Q96HF1 295 aa13.71□□□□□ -0.21
CHRNA3-207ENST00000559941 PSCAO43653 123 aa13.7□□□□□ -0.22
CHRNA3-207ENST00000559941 EIF5AP63241 154 aaKnown RBP13.7□□□□□ -0.22
CHRNA3-207ENST00000559941 Q9HAA7 133 aa13.7□□□□□ -0.22
CHRNA3-207ENST00000559941 A0A1B0GV50 99 aa13.69□□□□□ -0.22
CHRNA3-207ENST00000559941 LRCOL1A6NCL2 159 aa13.69□□□□□ -0.22
CHRNA3-207ENST00000559941 H2AFB1P0C5Y9 115 aa13.69□□□□□ -0.22
CHRNA3-207ENST00000559941 FAT1Q14517 4588 aa13.68□□□□□ -0.22
CHRNA3-207ENST00000559941 SCO2A0A1W2PP80 73 aa13.68□□□□□ -0.22
CHRNA3-207ENST00000559941 M0R381 172 aa13.68□□□□□ -0.22
CHRNA3-207ENST00000559941 PFDN1O60925 122 aa13.68□□□□□ -0.22
CHRNA3-207ENST00000559941 KRTAP10-1P60331 282 aa13.68□□□□□ -0.22
CHRNA3-207ENST00000559941 LAGE3Q14657 143 aa13.68□□□□□ -0.22
CHRNA3-207ENST00000559941 FAM74A4Q5TZK3 123 aa13.68□□□□□ -0.22
CHRNA3-207ENST00000559941 ZFP82Q8N141 532 aa13.68□□□□□ -0.22
CHRNA3-207ENST00000559941 A0A087WWC5 75 aa13.67□□□□□ -0.22
CHRNA3-207ENST00000559941 A0A087WWL8 130 aa13.67□□□□□ -0.22
CHRNA3-207ENST00000559941 XGP55808 180 aa13.67□□□□□ -0.22
CHRNA3-207ENST00000559941 TMUB2Q71RG4 321 aa13.67□□□□□ -0.22
CHRNA3-207ENST00000559941 MLST8Q9BVC4 326 aa13.67□□□□□ -0.22
CHRNA3-207ENST00000559941 GCSHP23434 173 aa13.66□□□□□ -0.22
CHRNA3-207ENST00000559941 BAGE2Q86Y30 109 aa13.66□□□□□ -0.22
CHRNA3-207ENST00000559941 Q8N3U1 123 aa13.66□□□□□ -0.22
CHRNA3-207ENST00000559941 CXCL1P09341 107 aa13.65□□□□□ -0.22
CHRNA3-207ENST00000559941 NTN5Q8WTR8 489 aaPredicted RBP13.65□□□□□ -0.22
CHRNA3-207ENST00000559941 RPL19P84098 196 aaKnown RBP13.64□□□□□ -0.23
CHRNA3-207ENST00000559941 TM2D2Q9BX73 214 aa13.64□□□□□ -0.23
CHRNA3-207ENST00000559941 TRBV10-1A0A0K0K1A3 114 aa13.63□□□□□ -0.23
CHRNA3-207ENST00000559941 Q8N814 137 aa13.63□□□□□ -0.23
CHRNA3-207ENST00000559941 DNAH8Q96JB1 4490 aa13.62□□□□□ -0.23
CHRNA3-207ENST00000559941 IGLV5-52A0A0A0MRZ9 124 aa13.62□□□□□ -0.23
CHRNA3-207ENST00000559941 CCL20P78556 96 aa13.62□□□□□ -0.23
CHRNA3-207ENST00000559941 DAZ4Q86SG3 579 aaKnown RBP13.62□□□□□ -0.23
CHRNA3-207ENST00000559941 DAZ3Q9NR90 486 aaKnown RBP13.62□□□□□ -0.23
CHRNA3-207ENST00000559941 TRAV8-3A0A0A6YYJ7 113 aa13.61□□□□□ -0.23
CHRNA3-207ENST00000559941 SNAI2O43623 268 aa13.61□□□□□ -0.23
CHRNA3-207ENST00000559941 RAB5CP51148 216 aa13.61□□□□□ -0.23
CHRNA3-207ENST00000559941 TOR2AQ5JU69 321 aa13.61□□□□□ -0.23
CHRNA3-207ENST00000559941 OR10AG1Q8NH19 301 aa13.61□□□□□ -0.23
CHRNA3-207ENST00000559941 SSBP4Q9BWG4 385 aaPredicted RBP13.61□□□□□ -0.23
CHRNA3-207ENST00000559941 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
CHRNA3-207ENST00000559941 TRAV1-1A0A0B4J248 108 aa13.6□□□□□ -0.23
CHRNA3-207ENST00000559941 EPM2AB3EWF7 344 aa13.6□□□□□ -0.23
CHRNA3-207ENST00000559941 RPL35P42766 123 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-207ENST00000559941 RPL36AP83881 106 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-207ENST00000559941 PRR27Q6MZM9 219 aa13.6□□□□□ -0.23
CHRNA3-207ENST00000559941 NIT1Q86X76 327 aa13.6□□□□□ -0.23
CHRNA3-207ENST00000559941 RPL36ALQ969Q0 106 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-207ENST00000559941 C11orf52Q96A22 123 aa13.6□□□□□ -0.23
CHRNA3-207ENST00000559941 TRBV7-3A0A075B6L6 115 aa13.59□□□□□ -0.23
CHRNA3-207ENST00000559941 OR5AL1P0C617 328 aa13.59□□□□□ -0.23
CHRNA3-207ENST00000559941 RAB4BP61018 213 aa13.59□□□□□ -0.23
CHRNA3-207ENST00000559941 UBE2D3P61077 147 aa13.59□□□□□ -0.23
CHRNA3-207ENST00000559941 UBE2D2P62837 147 aa13.59□□□□□ -0.23
CHRNA3-207ENST00000559941 GNG13Q9P2W3 67 aa13.59□□□□□ -0.23
CHRNA3-207ENST00000559941 EIF5AL1Q6IS14 154 aaKnown RBP13.58□□□□□ -0.24
CHRNA3-207ENST00000559941 OR10G8Q8NGN5 311 aa13.58□□□□□ -0.24
CHRNA3-207ENST00000559941 URGCP-MRPS24S4R325 110 aa13.58□□□□□ -0.24
CHRNA3-207ENST00000559941 DERL1Q9BUN8 251 aa13.57□□□□□ -0.24
CHRNA3-207ENST00000559941 TEX46H3BTG2 121 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 SULT1A2P50226 295 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 WFDC2Q14508 124 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 ZNF56Q15929 161 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 SPANXN1Q5VSR9 72 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 TCTE3Q8IZS6 198 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 TMEM70Q9BUB7 260 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 CHCHD7Q9BUK0 85 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 COX11Q9Y6N1 276 aa13.56□□□□□ -0.24
CHRNA3-207ENST00000559941 NEXN-AS1Q8NBZ9 246 aa13.55□□□□□ -0.24
CHRNA3-207ENST00000559941 MUC21A0A0G2JKD1 596 aa13.54□□□□□ -0.24
CHRNA3-207ENST00000559941 MUC21A0A140T8X8 626 aa13.54□□□□□ -0.24
CHRNA3-207ENST00000559941 CENPWQ5EE01 88 aa13.54□□□□□ -0.24
CHRNA3-207ENST00000559941 RMI2Q96E14 147 aa13.54□□□□□ -0.24
CHRNA3-207ENST00000559941 KLK12Q9UKR0 248 aa13.54□□□□□ -0.24
CHRNA3-207ENST00000559941 A0A087WX48 190 aa13.53□□□□□ -0.24
CHRNA3-207ENST00000559941 IGLV2-8P01709 118 aa13.53□□□□□ -0.24
CHRNA3-207ENST00000559941 ELOBQ15370 118 aa13.53□□□□□ -0.24
CHRNA3-207ENST00000559941 FRZBQ92765 325 aa13.53□□□□□ -0.24
CHRNA3-207ENST00000559941 TRBV6-8A0A0A6YYG3 113 aa13.52□□□□□ -0.25
CHRNA3-207ENST00000559941 Q5VSD8 79 aa13.52□□□□□ -0.25
CHRNA3-207ENST00000559941 KCNIP4Q6PIL6 250 aa13.52□□□□□ -0.25
CHRNA3-207ENST00000559941 KIF25-AS1Q9Y6Z4 181 aa13.52□□□□□ -0.25
CHRNA3-207ENST00000559941 LECT2O14960 151 aa13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 SMR3BP02814 79 aaPredicted RBP13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 SSTP61278 116 aa13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 MEF2BQ02080 365 aaPredicted RBP13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 SLC51BQ86UW2 128 aa13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 UBE2WQ96B02 151 aa13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 DAZAP1Q96EP5 407 aaKnown RBP13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 SMIM12Q96EX1 92 aa13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 DNAJC30Q96LL9 226 aa13.51□□□□□ -0.25
CHRNA3-207ENST00000559941 VPS13BQ7Z7G8 4022 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 RAB19A4D1S5 217 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 C19orf71A6NCJ1 209 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 F5H697 171 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 PDE6DO43924 150 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 IFNA1P01562 189 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 C1QBP02746 253 aa13.5□□□□□ -0.25
CHRNA3-207ENST00000559941 RPS20P60866 119 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms