RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 SPANXN1Q5VSR9 72 aa14.04□□□□□ -0.16
TSPAN3-207ENST00000559494 TPPP3Q9BW30 176 aa14.04□□□□□ -0.16
TSPAN3-207ENST00000559494 LINC00588Q9Y4M8 146 aa14.04□□□□□ -0.16
TSPAN3-207ENST00000559494 TRBV6-4A0A1B0GX49 114 aa14.03□□□□□ -0.16
TSPAN3-207ENST00000559494 K7EQD1 137 aa14.03□□□□□ -0.16
TSPAN3-207ENST00000559494 CCL18P55774 89 aa14.03□□□□□ -0.16
TSPAN3-207ENST00000559494 ERVFC1-1P60608 527 aa14.03□□□□□ -0.16
TSPAN3-207ENST00000559494 RPL23P62829 140 aaKnown RBP14.03□□□□□ -0.16
TSPAN3-207ENST00000559494 LYZL1Q6UWQ5 148 aa14.03□□□□□ -0.16
TSPAN3-207ENST00000559494 FAM74A4Q5TZK3 123 aa14.02□□□□□ -0.17
TSPAN3-207ENST00000559494 MSRB1Q9NZV6 116 aa14.02□□□□□ -0.17
TSPAN3-207ENST00000559494 NAT8Q9UHE5 227 aa14.02□□□□□ -0.17
TSPAN3-207ENST00000559494 A0A1W2PPQ1 181 aa14.01□□□□□ -0.17
TSPAN3-207ENST00000559494 F2Z2F3 143 aa14.01□□□□□ -0.17
TSPAN3-207ENST00000559494 RHODO00212 210 aa14.01□□□□□ -0.17
TSPAN3-207ENST00000559494 UQCC3Q6UW78 93 aa14.01□□□□□ -0.17
TSPAN3-207ENST00000559494 GTSF1Q8WW33 167 aa14.01□□□□□ -0.17
TSPAN3-207ENST00000559494 OSTCQ9NRP0 149 aa14.01□□□□□ -0.17
TSPAN3-207ENST00000559494 RHOHQ15669 191 aa14□□□□□ -0.17
TSPAN3-207ENST00000559494 NEGR1Q7Z3B1 354 aa14□□□□□ -0.17
TSPAN3-207ENST00000559494 C14orf178Q8N769 122 aaPredicted RBP14□□□□□ -0.17
TSPAN3-207ENST00000559494 ISOC2Q96AB3 205 aa14□□□□□ -0.17
TSPAN3-207ENST00000559494 PRADC1Q9BSG0 188 aa14□□□□□ -0.17
TSPAN3-207ENST00000559494 Q9UF83 564 aa14□□□□□ -0.17
TSPAN3-207ENST00000559494 A8MWL6 223 aa13.99□□□□□ -0.17
TSPAN3-207ENST00000559494 SRIP30626 198 aa13.99□□□□□ -0.17
TSPAN3-207ENST00000559494 FAM3BP58499 235 aaPredicted RBP13.99□□□□□ -0.17
TSPAN3-207ENST00000559494 CACNG7P62955 275 aa13.99□□□□□ -0.17
TSPAN3-207ENST00000559494 ADIRFQ15847 76 aa13.99□□□□□ -0.17
TSPAN3-207ENST00000559494 LYPD5Q6UWN5 251 aa13.99□□□□□ -0.17
TSPAN3-207ENST00000559494 CTRLP40313 264 aa13.98□□□□□ -0.17
TSPAN3-207ENST00000559494 CT83Q5H943 113 aa13.98□□□□□ -0.17
TSPAN3-207ENST00000559494 WDR73Q6P4I2 378 aa13.98□□□□□ -0.17
TSPAN3-207ENST00000559494 ZNRF2Q8NHG8 242 aa13.98□□□□□ -0.17
TSPAN3-207ENST00000559494 KIF25-AS1Q9Y6Z4 181 aa13.98□□□□□ -0.17
TSPAN3-207ENST00000559494 NTF3P20783 257 aa13.97□□□□□ -0.17
TSPAN3-207ENST00000559494 DNAH10Q8IVF4 4471 aa13.97□□□□□ -0.17
TSPAN3-207ENST00000559494 TMEM218A2RU14 115 aa13.96□□□□□ -0.17
TSPAN3-207ENST00000559494 ADCYAP1P18509 176 aa13.96□□□□□ -0.17
TSPAN3-207ENST00000559494 FOXA3P55318 350 aaPredicted RBP13.96□□□□□ -0.17
TSPAN3-207ENST00000559494 LINC00315P59091 139 aa13.96□□□□□ -0.17
TSPAN3-207ENST00000559494 CNFNQ9BYD5 112 aa13.96□□□□□ -0.17
TSPAN3-207ENST00000559494 MRPS16Q9Y3D3 137 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-207ENST00000559494 V9GYV3 84 aa13.96□□□□□ -0.17
TSPAN3-207ENST00000559494 IGLV2-18A0A075B6J9 118 aa13.95□□□□□ -0.18
TSPAN3-207ENST00000559494 C15orf54Q8N8G6 183 aa13.95□□□□□ -0.18
TSPAN3-207ENST00000559494 OR10G8Q8NGN5 311 aa13.95□□□□□ -0.18
TSPAN3-207ENST00000559494 AP1S3Q96PC3 154 aa13.95□□□□□ -0.18
TSPAN3-207ENST00000559494 RAB4BP61018 213 aa13.94□□□□□ -0.18
TSPAN3-207ENST00000559494 SH2D6Q7Z4S9 175 aa13.94□□□□□ -0.18
TSPAN3-207ENST00000559494 TSKUQ8WUA8 353 aa13.94□□□□□ -0.18
TSPAN3-207ENST00000559494 PGLYRP4Q96LB8 373 aa13.94□□□□□ -0.18
TSPAN3-207ENST00000559494 UPK3BQ9BT76 320 aa13.94□□□□□ -0.18
TSPAN3-207ENST00000559494 GAGE12JA6NER3 117 aa13.93□□□□□ -0.18
TSPAN3-207ENST00000559494 M0R2N4 97 aa13.93□□□□□ -0.18
TSPAN3-207ENST00000559494 EVI2AP22794 236 aa13.93□□□□□ -0.18
TSPAN3-207ENST00000559494 GAGE1Q13065 139 aa13.93□□□□□ -0.18
TSPAN3-207ENST00000559494 GAGE4Q13068 117 aa13.93□□□□□ -0.18
TSPAN3-207ENST00000559494 GAGE5Q13069 117 aa13.93□□□□□ -0.18
TSPAN3-207ENST00000559494 GAGE13Q4V321 117 aa13.93□□□□□ -0.18
TSPAN3-207ENST00000559494 Q9H8V8 135 aa13.93□□□□□ -0.18
TSPAN3-207ENST00000559494 SMIM17P0DL12 118 aa13.92□□□□□ -0.18
TSPAN3-207ENST00000559494 LINC00694P0DN24 101 aa13.92□□□□□ -0.18
TSPAN3-207ENST00000559494 TWIST1Q15672 202 aa13.92□□□□□ -0.18
TSPAN3-207ENST00000559494 ZNF56Q15929 161 aa13.92□□□□□ -0.18
TSPAN3-207ENST00000559494 GFRA4Q9GZZ7 299 aa13.92□□□□□ -0.18
TSPAN3-207ENST00000559494 FAM231BA6NCW3 169 aa13.91□□□□□ -0.18
TSPAN3-207ENST00000559494 F5H697 171 aa13.91□□□□□ -0.18
TSPAN3-207ENST00000559494 F8W036 122 aa13.91□□□□□ -0.18
TSPAN3-207ENST00000559494 DNAH2Q9P225 4427 aa13.91□□□□□ -0.18
TSPAN3-207ENST00000559494 HIGD1CA8MV81 97 aa13.9□□□□□ -0.18
TSPAN3-207ENST00000559494 TRGC1P0CF51 173 aa13.9□□□□□ -0.18
TSPAN3-207ENST00000559494 Q6ZR54 194 aa13.9□□□□□ -0.18
TSPAN3-207ENST00000559494 ATP6V0E2Q8NHE4 81 aa13.9□□□□□ -0.18
TSPAN3-207ENST00000559494 TRBV10-1A0A0K0K1A3 114 aa13.9□□□□□ -0.19
TSPAN3-207ENST00000559494 TIRAPP58753 221 aa13.9□□□□□ -0.19
TSPAN3-207ENST00000559494 MGPP08493 103 aa13.89□□□□□ -0.19
TSPAN3-207ENST00000559494 PNRC1Q12796 327 aaPredicted RBP13.89□□□□□ -0.19
TSPAN3-207ENST00000559494 NUP35Q8NFH5 326 aa13.89□□□□□ -0.19
TSPAN3-207ENST00000559494 SEC11CQ9BY50 192 aa13.89□□□□□ -0.19
TSPAN3-207ENST00000559494 GTSF1LQ9H1H1 148 aa13.89□□□□□ -0.19
TSPAN3-207ENST00000559494 DPH3P1Q9H4G8 78 aa13.89□□□□□ -0.19
TSPAN3-207ENST00000559494 NBDYA0A0U1RRE5 68 aa13.88□□□□□ -0.19
TSPAN3-207ENST00000559494 NEXN-AS1Q8NBZ9 246 aa13.88□□□□□ -0.19
TSPAN3-207ENST00000559494 A0A1B0GUT8 65 aa13.87□□□□□ -0.19
TSPAN3-207ENST00000559494 SMIM27A0A1W2PRY6 76 aa13.87□□□□□ -0.19
TSPAN3-207ENST00000559494 SIVA1O15304 175 aa13.87□□□□□ -0.19
TSPAN3-207ENST00000559494 RPL36AP83881 106 aaKnown RBP13.87□□□□□ -0.19
TSPAN3-207ENST00000559494 SUMO4Q6EEV6 95 aa13.87□□□□□ -0.19
TSPAN3-207ENST00000559494 RPL36ALQ969Q0 106 aaKnown RBP13.87□□□□□ -0.19
TSPAN3-207ENST00000559494 DNAH17Q9UFH2 4485 aa13.86□□□□□ -0.19
TSPAN3-207ENST00000559494 FRAS1Q86XX4 4008 aa13.86□□□□□ -0.19
TSPAN3-207ENST00000559494 TRBV7-3A0A075B6L6 115 aa13.86□□□□□ -0.19
TSPAN3-207ENST00000559494 M0QY20 66 aa13.86□□□□□ -0.19
TSPAN3-207ENST00000559494 C10orf91Q5T1B1 145 aa13.86□□□□□ -0.19
TSPAN3-207ENST00000559494 SLC7A5P1Q8MH63 180 aa13.86□□□□□ -0.19
TSPAN3-207ENST00000559494 UBE2D3P61077 147 aa13.85□□□□□ -0.19
TSPAN3-207ENST00000559494 UBE2D2P62837 147 aa13.85□□□□□ -0.19
TSPAN3-207ENST00000559494 WFDC10BQ8IUB3 73 aa13.85□□□□□ -0.19
TSPAN3-207ENST00000559494 BORCS7Q96B45 105 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms