RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 HIST1H2BAQ96A08 127 aa13.57□□□□□ -0.24
TSPAN3-206ENST00000559373 TMEM70Q9BUB7 260 aa13.57□□□□□ -0.24
TSPAN3-206ENST00000559373 TM2D2Q9BX73 214 aa13.57□□□□□ -0.24
TSPAN3-206ENST00000559373 UBE2G1P62253 170 aa13.56□□□□□ -0.24
TSPAN3-206ENST00000559373 LAGE3Q14657 143 aa13.56□□□□□ -0.24
TSPAN3-206ENST00000559373 FAM162BQ5T6X4 162 aa13.56□□□□□ -0.24
TSPAN3-206ENST00000559373 SYT8Q8NBV8 401 aa13.56□□□□□ -0.24
TSPAN3-206ENST00000559373 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
TSPAN3-206ENST00000559373 A0A1B0GV50 99 aa13.55□□□□□ -0.24
TSPAN3-206ENST00000559373 PIK3CD-AS1Q5SR53 167 aa13.55□□□□□ -0.24
TSPAN3-206ENST00000559373 BOLA1Q9Y3E2 137 aa13.55□□□□□ -0.24
TSPAN3-206ENST00000559373 MYCBP2O75592 4640 aa13.54□□□□□ -0.24
TSPAN3-206ENST00000559373 DNLZQ5SXM8 178 aa13.54□□□□□ -0.24
TSPAN3-206ENST00000559373 FMC1Q96HJ9 113 aa13.54□□□□□ -0.24
TSPAN3-206ENST00000559373 NKX6-2Q9C056 277 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-206ENST00000559373 KLK12Q9UKR0 248 aa13.54□□□□□ -0.24
TSPAN3-206ENST00000559373 ZFP30Q9Y2G7 519 aa13.54□□□□□ -0.24
TSPAN3-206ENST00000559373 TRAV8-3A0A0A6YYJ7 113 aa13.53□□□□□ -0.24
TSPAN3-206ENST00000559373 PAGE4O60829 102 aa13.53□□□□□ -0.24
TSPAN3-206ENST00000559373 TPT1P13693 172 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-206ENST00000559373 ZNF674Q2M3X9 581 aa13.53□□□□□ -0.24
TSPAN3-206ENST00000559373 SFRP2Q96HF1 295 aa13.53□□□□□ -0.24
TSPAN3-206ENST00000559373 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
TSPAN3-206ENST00000559373 NIT1Q86X76 327 aa13.52□□□□□ -0.25
TSPAN3-206ENST00000559373 URGCP-MRPS24S4R325 110 aa13.52□□□□□ -0.25
TSPAN3-206ENST00000559373 IGKV2D-24A0A075B6R9 120 aa13.51□□□□□ -0.25
TSPAN3-206ENST00000559373 A0A087WWC5 75 aa13.51□□□□□ -0.25
TSPAN3-206ENST00000559373 RHODO00212 210 aa13.51□□□□□ -0.25
TSPAN3-206ENST00000559373 LTAP01374 205 aa13.51□□□□□ -0.25
TSPAN3-206ENST00000559373 AKR1C3P42330 323 aa13.51□□□□□ -0.25
TSPAN3-206ENST00000559373 SSTP61278 116 aa13.51□□□□□ -0.25
TSPAN3-206ENST00000559373 DNAH8Q96JB1 4490 aa13.51□□□□□ -0.25
TSPAN3-206ENST00000559373 MUC21A0A0G2JKD1 596 aa13.5□□□□□ -0.25
TSPAN3-206ENST00000559373 MUC21A0A140T8X8 626 aa13.5□□□□□ -0.25
TSPAN3-206ENST00000559373 LINC01559Q495D7 138 aa13.5□□□□□ -0.25
TSPAN3-206ENST00000559373 COX8CQ7Z4L0 72 aa13.5□□□□□ -0.25
TSPAN3-206ENST00000559373 STOML3Q8TAV4 291 aa13.49□□□□□ -0.25
TSPAN3-206ENST00000559373 UBE2WQ96B02 151 aa13.49□□□□□ -0.25
TSPAN3-206ENST00000559373 SCO2A0A1W2PP80 73 aa13.48□□□□□ -0.25
TSPAN3-206ENST00000559373 TOR2AQ5JU69 321 aa13.48□□□□□ -0.25
TSPAN3-206ENST00000559373 ZFP82Q8N141 532 aa13.48□□□□□ -0.25
TSPAN3-206ENST00000559373 FAM213BQ8TBF2 198 aa13.48□□□□□ -0.25
TSPAN3-206ENST00000559373 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
TSPAN3-206ENST00000559373 SFT2D1Q8WV19 159 aa13.47□□□□□ -0.25
TSPAN3-206ENST00000559373 A0A087WX48 190 aa13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 TRBV6-1A0A0K0K1D8 114 aa13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 RBFOX3A6NFN3 312 aa13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 UBE2D3P61077 147 aa13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 UBE2D2P62837 147 aa13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 RPL36AP83881 106 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 RGS21Q2M5E4 152 aa13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 LINC00528Q8N1L1 170 aa13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 RPL36ALQ969Q0 106 aaKnown RBP13.46□□□□□ -0.25
TSPAN3-206ENST00000559373 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
TSPAN3-206ENST00000559373 TMEM262E9PQX1 116 aa13.45□□□□□ -0.26
TSPAN3-206ENST00000559373 ZNF56Q15929 161 aa13.45□□□□□ -0.26
TSPAN3-206ENST00000559373 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
TSPAN3-206ENST00000559373 Q6ZSA8 131 aa13.45□□□□□ -0.26
TSPAN3-206ENST00000559373 KCNRGQ8N5I3 272 aa13.44□□□□□ -0.26
TSPAN3-206ENST00000559373 C1QBP02746 253 aa13.43□□□□□ -0.26
TSPAN3-206ENST00000559373 NEXN-AS1Q8NBZ9 246 aa13.43□□□□□ -0.26
TSPAN3-206ENST00000559373 RMI2Q96E14 147 aa13.43□□□□□ -0.26
TSPAN3-206ENST00000559373 TRBV10-1A0A0K0K1A3 114 aa13.42□□□□□ -0.26
TSPAN3-206ENST00000559373 SCXQ7RTU7 201 aa13.42□□□□□ -0.26
TSPAN3-206ENST00000559373 BAGE2Q86Y30 109 aa13.42□□□□□ -0.26
TSPAN3-206ENST00000559373 C15orf54Q8N8G6 183 aa13.42□□□□□ -0.26
TSPAN3-206ENST00000559373 MBD3L1Q8WWY6 194 aa13.42□□□□□ -0.26
TSPAN3-206ENST00000559373 COX11Q9Y6N1 276 aa13.42□□□□□ -0.26
TSPAN3-206ENST00000559373 RAB4BP61018 213 aa13.41□□□□□ -0.26
TSPAN3-206ENST00000559373 MPV17L2Q567V2 206 aa13.41□□□□□ -0.26
TSPAN3-206ENST00000559373 KCNIP4Q6PIL6 250 aa13.41□□□□□ -0.26
TSPAN3-206ENST00000559373 Q8N976 141 aa13.41□□□□□ -0.26
TSPAN3-206ENST00000559373 TCEAL7Q9BRU2 100 aa13.41□□□□□ -0.26
TSPAN3-206ENST00000559373 ZNF471Q9BX82 626 aaPredicted RBP13.41□□□□□ -0.26
TSPAN3-206ENST00000559373 F5H697 171 aa13.4□□□□□ -0.26
TSPAN3-206ENST00000559373 J3QL48 77 aa13.4□□□□□ -0.26
TSPAN3-206ENST00000559373 SEC11BP0C7V7 166 aa13.4□□□□□ -0.26
TSPAN3-206ENST00000559373 ENHOQ6UWT2 76 aa13.4□□□□□ -0.26
TSPAN3-206ENST00000559373 MLST8Q9BVC4 326 aa13.4□□□□□ -0.26
TSPAN3-206ENST00000559373 TRBV6-8A0A0A6YYG3 113 aa13.39□□□□□ -0.27
TSPAN3-206ENST00000559373 PFDN1O60925 122 aa13.39□□□□□ -0.27
TSPAN3-206ENST00000559373 PLA2G1BP04054 148 aaKnown RBP13.39□□□□□ -0.27
TSPAN3-206ENST00000559373 SPANXN1Q5VSR9 72 aa13.39□□□□□ -0.27
TSPAN3-206ENST00000559373 TMUB2Q71RG4 321 aa13.39□□□□□ -0.27
TSPAN3-206ENST00000559373 ANGP03950 147 aaKnown RBP13.38□□□□□ -0.27
TSPAN3-206ENST00000559373 GZMBP10144 247 aa13.38□□□□□ -0.27
TSPAN3-206ENST00000559373 ZNF345Q14585 488 aa13.38□□□□□ -0.27
TSPAN3-206ENST00000559373 ELOBQ15370 118 aa13.38□□□□□ -0.27
TSPAN3-206ENST00000559373 OR10G8Q8NGN5 311 aa13.38□□□□□ -0.27
TSPAN3-206ENST00000559373 CHCHD5Q9BSY4 110 aa13.38□□□□□ -0.27
TSPAN3-206ENST00000559373 DERL1Q9BUN8 251 aa13.38□□□□□ -0.27
TSPAN3-206ENST00000559373 S100A9P06702 114 aaKnown RBP13.37□□□□□ -0.27
TSPAN3-206ENST00000559373 H2AFB1P0C5Y9 115 aa13.37□□□□□ -0.27
TSPAN3-206ENST00000559373 CCL20P78556 96 aa13.37□□□□□ -0.27
TSPAN3-206ENST00000559373 CLPSL2Q6UWE3 100 aa13.37□□□□□ -0.27
TSPAN3-206ENST00000559373 KANTRA0A1W2PQU2 76 aa13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 UMAD1C9J7I0 102 aa13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 BCL2L11O43521 198 aa13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 SNAI2O43623 268 aa13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 HLA-DQA1P01909 254 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms