RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
CASC4-209ENST00000559222 ZFP2Q6ZN57 461 aa12.83□□□□□ -0.36
CASC4-209ENST00000559222 NEGR1Q7Z3B1 354 aa12.83□□□□□ -0.36
CASC4-209ENST00000559222 UPK3BQ9BT76 320 aa12.83□□□□□ -0.36
CASC4-209ENST00000559222 TPPP3Q9BW30 176 aa12.83□□□□□ -0.36
CASC4-209ENST00000559222 NBDYA0A0U1RRE5 68 aa12.82□□□□□ -0.36
CASC4-209ENST00000559222 RTL8CO15255 209 aa12.82□□□□□ -0.36
CASC4-209ENST00000559222 RHOHQ15669 191 aa12.82□□□□□ -0.36
CASC4-209ENST00000559222 SMIM7Q9BQ49 75 aa12.82□□□□□ -0.36
CASC4-209ENST00000559222 Q9H8V8 135 aa12.82□□□□□ -0.36
CASC4-209ENST00000559222 CIDEAO60543 219 aa12.81□□□□□ -0.36
CASC4-209ENST00000559222 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
CASC4-209ENST00000559222 MSRB1Q9NZV6 116 aa12.81□□□□□ -0.36
CASC4-209ENST00000559222 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
CASC4-209ENST00000559222 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
CASC4-209ENST00000559222 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
CASC4-209ENST00000559222 GAGE1Q13065 139 aa12.8□□□□□ -0.36
CASC4-209ENST00000559222 GAGE4Q13068 117 aa12.8□□□□□ -0.36
CASC4-209ENST00000559222 GAGE5Q13069 117 aa12.8□□□□□ -0.36
CASC4-209ENST00000559222 GAGE13Q4V321 117 aa12.8□□□□□ -0.36
CASC4-209ENST00000559222 SPANXN1Q5VSR9 72 aa12.8□□□□□ -0.36
CASC4-209ENST00000559222 PRADC1Q9BSG0 188 aa12.8□□□□□ -0.36
CASC4-209ENST00000559222 RPP21Q9H633 154 aaKnown RBP12.8□□□□□ -0.36
CASC4-209ENST00000559222 ZNF727A8MUV8 499 aa12.79□□□□□ -0.36
CASC4-209ENST00000559222 RHODO00212 210 aa12.79□□□□□ -0.36
CASC4-209ENST00000559222 NDUFS6O75380 124 aaKnown RBP12.79□□□□□ -0.36
CASC4-209ENST00000559222 IFITM2Q01629 132 aa12.79□□□□□ -0.36
CASC4-209ENST00000559222 LYZL1Q6UWQ5 148 aa12.79□□□□□ -0.36
CASC4-209ENST00000559222 LINC01551Q86U37 167 aa12.79□□□□□ -0.36
CASC4-209ENST00000559222 WFDC10BQ8IUB3 73 aa12.79□□□□□ -0.36
CASC4-209ENST00000559222 BIN3Q9NQY0 253 aa12.79□□□□□ -0.36
CASC4-209ENST00000559222 KIF25-AS1Q9Y6Z4 181 aa12.78□□□□□ -0.36
CASC4-209ENST00000559222 GTSF1Q8WW33 167 aa12.77□□□□□ -0.37
CASC4-209ENST00000559222 CTRLP40313 264 aa12.76□□□□□ -0.37
CASC4-209ENST00000559222 LINC00315P59091 139 aa12.76□□□□□ -0.37
CASC4-209ENST00000559222 LY96Q9Y6Y9 160 aa12.76□□□□□ -0.37
CASC4-209ENST00000559222 SIVA1O15304 175 aa12.75□□□□□ -0.37
CASC4-209ENST00000559222 GATCO43716 136 aaKnown RBP12.75□□□□□ -0.37
CASC4-209ENST00000559222 ZNF56Q15929 161 aa12.75□□□□□ -0.37
CASC4-209ENST00000559222 FAM231DQ6ZW35 169 aa12.75□□□□□ -0.37
CASC4-209ENST00000559222 XKRY2A2RUG3 117 aa12.74□□□□□ -0.37
CASC4-209ENST00000559222 ERVFC1-1P60608 527 aa12.74□□□□□ -0.37
CASC4-209ENST00000559222 PEA15Q15121 130 aa12.74□□□□□ -0.37
CASC4-209ENST00000559222 ATP6V0E2Q8NHE4 81 aa12.74□□□□□ -0.37
CASC4-209ENST00000559222 AP1S3Q96PC3 154 aa12.74□□□□□ -0.37
CASC4-209ENST00000559222 RPL23P62829 140 aaKnown RBP12.73□□□□□ -0.37
CASC4-209ENST00000559222 C1orf134Q5TEV5 83 aa12.73□□□□□ -0.37
CASC4-209ENST00000559222 HECTD4Q9Y4D8 3996 aa12.72□□□□□ -0.37
CASC4-209ENST00000559222 NTF3P20783 257 aa12.72□□□□□ -0.37
CASC4-209ENST00000559222 EVI2AP22794 236 aa12.72□□□□□ -0.37
CASC4-209ENST00000559222 TIRAPP58753 221 aa12.72□□□□□ -0.37
CASC4-209ENST00000559222 RAB4BP61018 213 aa12.72□□□□□ -0.37
CASC4-209ENST00000559222 CACNG7P62955 275 aa12.72□□□□□ -0.37
CASC4-209ENST00000559222 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
CASC4-209ENST00000559222 ISOC2Q96AB3 205 aa12.72□□□□□ -0.37
CASC4-209ENST00000559222 A0A1W2PPQ1 181 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 F2Z2F3 143 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 MGPP08493 103 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 TMEM241Q24JQ0 296 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 C6orf223Q8N319 242 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 Q8N3U1 123 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 NEXN-AS1Q8NBZ9 246 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 GTSF1LQ9H1H1 148 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 TNFRSF18Q9Y5U5 241 aa12.71□□□□□ -0.37
CASC4-209ENST00000559222 PKD1P98161 4303 aa12.71□□□□□ -0.38
CASC4-209ENST00000559222 PRSS29PA6NIE9 313 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 F5H697 171 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 ADIRFQ15847 76 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 TTC32Q5I0X7 151 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 PGLYRP4Q96LB8 373 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 OSTCQ9NRP0 149 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 V9GYV3 84 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 HERC2O95714 4834 aa12.7□□□□□ -0.38
CASC4-209ENST00000559222 A0A1B0GVY2 172 aa12.69□□□□□ -0.38
CASC4-209ENST00000559222 FOXA3P55318 350 aaPredicted RBP12.69□□□□□ -0.38
CASC4-209ENST00000559222 FAM74A3Q4VXF1 159 aa12.69□□□□□ -0.38
CASC4-209ENST00000559222 CLLU1Q5K131 121 aa12.69□□□□□ -0.38
CASC4-209ENST00000559222 LELP1Q5T871 98 aa12.69□□□□□ -0.38
CASC4-209ENST00000559222 NAT8Q9UHE5 227 aa12.69□□□□□ -0.38
CASC4-209ENST00000559222 DNAH11Q96DT5 4516 aa12.69□□□□□ -0.38
CASC4-209ENST00000559222 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 UBE2D3P61077 147 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 RAB14P61106 215 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 UBE2D2P62837 147 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 TNP2Q05952 138 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 CT83Q5H943 113 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
CASC4-209ENST00000559222 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
CASC4-209ENST00000559222 TRBV10-1A0A0K0K1A3 114 aa12.67□□□□□ -0.38
CASC4-209ENST00000559222 A8MWL6 223 aa12.67□□□□□ -0.38
CASC4-209ENST00000559222 TWIST1Q15672 202 aa12.67□□□□□ -0.38
CASC4-209ENST00000559222 SOHLH1Q5JUK2 328 aa12.67□□□□□ -0.38
CASC4-209ENST00000559222 LINC00336Q6ZUF6 198 aa12.67□□□□□ -0.38
CASC4-209ENST00000559222 OR10G8Q8NGN5 311 aa12.67□□□□□ -0.38
CASC4-209ENST00000559222 SMDT1Q9H4I9 107 aa12.67□□□□□ -0.38
CASC4-209ENST00000559222 TRBV7-3A0A075B6L6 115 aa12.66□□□□□ -0.38
CASC4-209ENST00000559222 RPL36AP83881 106 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms