RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 A0A1B0GW15 77 aa4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 CIDEAO60543 219 aa4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 NTF3P20783 257 aa4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 ZNF56Q15929 161 aa4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 MRPL54Q6P161 138 aaKnown RBP4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 PHLDA1Q8WV24 401 aaPredicted RBP4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 ZNF479Q96JC4 524 aa4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 IMMP2LQ96T52 175 aa4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 JPT2Q9H910 190 aa4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 TMEM242Q9NWH2 141 aa4.67□□□□□ -1.66
CHRNA3-204ENST00000559002 NUPR2A6NF83 97 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 F5H697 171 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 ATP6V1G1O75348 118 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 S100A8P05109 93 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 MGPP08493 103 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 CAMPP49913 170 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 HBBP68871 147 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 SLAQ13239 276 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 ATRAIDQ6UW56 229 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 ZFP2Q6ZN57 461 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 ATP5L2Q7Z4Y8 100 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 C14orf178Q8N769 122 aaPredicted RBP4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 POM121L12Q8N7R1 296 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 MUC7Q8TAX7 377 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 BTF3L4Q96K17 158 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 DPH3P1Q9H4G8 78 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 MSRB1Q9NZV6 116 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 KLK5Q9Y337 293 aaPredicted RBP4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 URGCP-MRPS24S4R325 110 aa4.66□□□□□ -1.66
CHRNA3-204ENST00000559002 TRAV9-1A0A075B6T8 112 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 A0A0J9YY99 117 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 CRYGDP07320 174 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 GATA1P15976 413 aaPredicted RBP4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 HOXA5P20719 270 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 EVI2AP22794 236 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 S100A1P23297 94 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 FHL2Q14192 279 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 RHOHQ15669 191 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 ZFAND6Q6FIF0 208 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 CEMP1Q6PRD7 247 aaPredicted RBP4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 SAMD10Q9BYL1 202 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 TMEM191AQ9H0A3 160 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 PRO0255Q9UI72 69 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 HHLA3Q9XRX5 114 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 TENM2Q9NT68 2774 aa4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 PLECQ15149 4684 aaKnown RBP4.65□□□□□ -1.67
CHRNA3-204ENST00000559002 CSMD3Q7Z407 3707 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 TRAV26-1A0A087WT03 109 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 TRBV6-4A0A1B0GX49 114 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 A0A1B0GXF2 115 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 IGLL5B9A064 214 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 H7C1H1 209 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 K7EQD1 137 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 PAX4O43316 350 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 CRYBA4P53673 196 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 RAB4BP61018 213 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 UFSP1Q6NVU6 142 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 TMEM88Q6PEY1 159 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 FAM210BQ96KR6 192 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 PRADC1Q9BSG0 188 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 SMCO4Q9NRQ5 59 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 MUC4Q99102 2169 aa4.64□□□□□ -1.67
CHRNA3-204ENST00000559002 STARD9Q9P2P6 4700 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 C3orf84H3BNL1 204 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 NUDT3O95989 172 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 RASL11AQ6T310 242 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 CBLN2Q8IUK8 224 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 AMN1Q8IY45 258 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 SLC25A29Q8N8R3 303 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 C15orf53Q8NAA6 179 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 ICOSQ9Y6W8 199 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 KIF25-AS1Q9Y6Z4 181 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 ALMS1Q8TCU4 4167 aa4.63□□□□□ -1.67
CHRNA3-204ENST00000559002 TGIF2-C20orf24A0A0A6YYL0 155 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 GAGE12JA6NER3 117 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 H3BNG1 76 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 SCO1O75880 301 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 GYPEP15421 78 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 SRIP30626 198 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 TCTAP57738 103 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 LINC00315P59091 139 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 RPL36AP83881 106 aaKnown RBP4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 GAGE1Q13065 139 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 GAGE4Q13068 117 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 GAGE5Q13069 117 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 ELOBQ15370 118 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 MRPL23Q16540 153 aaKnown RBP4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 COX19Q49B96 90 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 GAGE13Q4V321 117 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 FAM104BQ5XKR9 115 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 SUMO4Q6EEV6 95 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 Q6ZSN1 163 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 GATD1Q8NB37 220 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 RPL36ALQ969Q0 106 aaKnown RBP4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 VSIG2Q96IQ7 327 aa4.62□□□□□ -1.67
CHRNA3-204ENST00000559002 DNAH1Q9P2D7 4330 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 TRBV24-1A0A075B6N3 115 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 TRAV26-2A0A0B4J265 109 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 TRBV10-1A0A0K0K1A3 114 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms