RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 GAGE1Q13065 139 aa7.5□□□□□ -1.21
PBX1-213ENST00000558796 GAGE4Q13068 117 aa7.5□□□□□ -1.21
PBX1-213ENST00000558796 GAGE5Q13069 117 aa7.5□□□□□ -1.21
PBX1-213ENST00000558796 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
PBX1-213ENST00000558796 SFRP2Q96HF1 295 aa7.5□□□□□ -1.21
PBX1-213ENST00000558796 Q9UF83 564 aa7.5□□□□□ -1.21
PBX1-213ENST00000558796 LY96Q9Y6Y9 160 aa7.5□□□□□ -1.21
PBX1-213ENST00000558796 DNAH5Q8TE73 4624 aa7.49□□□□□ -1.21
PBX1-213ENST00000558796 GZMBP10144 247 aa7.49□□□□□ -1.21
PBX1-213ENST00000558796 TAGLN2P37802 199 aaKnown RBP7.49□□□□□ -1.21
PBX1-213ENST00000558796 SSTP61278 116 aa7.49□□□□□ -1.21
PBX1-213ENST00000558796 ATP6V0E2Q8NHE4 81 aa7.49□□□□□ -1.21
PBX1-213ENST00000558796 RYR1P21817 5038 aa7.49□□□□□ -1.21
PBX1-213ENST00000558796 C19orf71A6NCJ1 209 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 SNAI2O43623 268 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 CRYGDP07320 174 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 DNAH10OSP0CZ25 163 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 LINC00694P0DN24 101 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 TIRAPP58753 221 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 OR10J3Q5JRS4 329 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 SPANXN1Q5VSR9 72 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 OR2D3Q8NGH3 330 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 DAZAP1Q96EP5 407 aaKnown RBP7.48□□□□□ -1.21
PBX1-213ENST00000558796 TPPP3Q9BW30 176 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 TNFRSF18Q9Y5U5 241 aa7.48□□□□□ -1.21
PBX1-213ENST00000558796 RBFOX3A6NFN3 312 aa7.47□□□□□ -1.21
PBX1-213ENST00000558796 OR5AL1P0C617 328 aa7.47□□□□□ -1.21
PBX1-213ENST00000558796 EVI2AP22794 236 aa7.47□□□□□ -1.21
PBX1-213ENST00000558796 ZNF56Q15929 161 aa7.47□□□□□ -1.21
PBX1-213ENST00000558796 TOR2AQ5JU69 321 aa7.47□□□□□ -1.21
PBX1-213ENST00000558796 LYPD6BQ8NI32 183 aa7.47□□□□□ -1.21
PBX1-213ENST00000558796 SMIM12Q96EX1 92 aa7.47□□□□□ -1.21
PBX1-213ENST00000558796 SSBP4Q9BWG4 385 aaPredicted RBP7.47□□□□□ -1.21
PBX1-213ENST00000558796 GTSF1LQ9H1H1 148 aa7.47□□□□□ -1.21
PBX1-213ENST00000558796 LRP1BQ9NZR2 4599 aa7.46□□□□□ -1.21
PBX1-213ENST00000558796 TRAV9-2A0A087WT02 112 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 TRAV8-6A0A0B4J262 113 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 IGHV3-38A0A0C4DH36 116 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 K7EN84 100 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 P01737 135 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 CEBPGP53567 150 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 LELP1Q5T871 98 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.22
PBX1-213ENST00000558796 FER1L6-AS1Q8NA97 138 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 MSRB1Q9NZV6 116 aa7.46□□□□□ -1.22
PBX1-213ENST00000558796 IGHV3-30P01768 117 aa7.45□□□□□ -1.22
PBX1-213ENST00000558796 IGHV3-33P01772 117 aa7.45□□□□□ -1.22
PBX1-213ENST00000558796 IGLC6P0CF74 106 aa7.45□□□□□ -1.22
PBX1-213ENST00000558796 IGHV3-30-3P0DP02 117 aa7.45□□□□□ -1.22
PBX1-213ENST00000558796 IGHV3-30-5P0DP03 117 aa7.45□□□□□ -1.22
PBX1-213ENST00000558796 BTF3P20290 206 aaKnown RBP7.45□□□□□ -1.22
PBX1-213ENST00000558796 RPS20P60866 119 aaKnown RBP7.45□□□□□ -1.22
PBX1-213ENST00000558796 Q8N3U1 123 aa7.45□□□□□ -1.22
PBX1-213ENST00000558796 AP1S3Q96PC3 154 aa7.45□□□□□ -1.22
PBX1-213ENST00000558796 BIN3Q9NQY0 253 aa7.45□□□□□ -1.22
PBX1-213ENST00000558796 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
PBX1-213ENST00000558796 LINC01556Q5JQF7 62 aa7.44□□□□□ -1.22
PBX1-213ENST00000558796 C10orf126Q8N4M7 172 aa7.44□□□□□ -1.22
PBX1-213ENST00000558796 NUDT10Q8NFP7 164 aa7.44□□□□□ -1.22
PBX1-213ENST00000558796 OCC1Q8TAD7 63 aa7.44□□□□□ -1.22
PBX1-213ENST00000558796 NUDT11Q96G61 164 aa7.44□□□□□ -1.22
PBX1-213ENST00000558796 EIF5A2Q9GZV4 153 aaKnown RBP7.44□□□□□ -1.22
PBX1-213ENST00000558796 RNASE7Q9H1E1 156 aaKnown RBP7.44□□□□□ -1.22
PBX1-213ENST00000558796 PCLOQ9Y6V0 5065 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 TRBV10-1A0A0K0K1A3 114 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 XKRY2A2RUG3 117 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 C16orf90A8MZG2 172 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 F5H697 171 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 MGPP08493 103 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 SMIM17P0DL12 118 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 RAB4BP61018 213 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
PBX1-213ENST00000558796 SPATA12Q7Z6I5 190 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 NFE4Q86UQ8 179 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
PBX1-213ENST00000558796 FAM210AQ96ND0 272 aa7.43□□□□□ -1.22
PBX1-213ENST00000558796 RPP21Q9H633 154 aaKnown RBP7.43□□□□□ -1.22
PBX1-213ENST00000558796 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
PBX1-213ENST00000558796 K7EP13 123 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 KRTAP10-2P60368 255 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 UBE2D3P61077 147 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 UBE2D2P62837 147 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 CACNG7P62955 275 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 LYZL1Q6UWQ5 148 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 Q9HAA7 133 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
PBX1-213ENST00000558796 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
PBX1-213ENST00000558796 A0A087WWC5 75 aa7.41□□□□□ -1.22
PBX1-213ENST00000558796 CTRLP40313 264 aa7.41□□□□□ -1.22
PBX1-213ENST00000558796 ERVFC1-1P60608 527 aa7.41□□□□□ -1.22
PBX1-213ENST00000558796 SMIM7Q9BQ49 75 aa7.41□□□□□ -1.22
PBX1-213ENST00000558796 HSPG2P98160 4391 aa7.41□□□□□ -1.22
PBX1-213ENST00000558796 IBA57-AS1B1ANH7 110 aa7.4□□□□□ -1.22
PBX1-213ENST00000558796 F2Z2F3 143 aa7.4□□□□□ -1.22
PBX1-213ENST00000558796 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.22
PBX1-213ENST00000558796 FUSP35637 526 aaKnown RBP eCLIP7.4□□□□□ -1.22
PBX1-213ENST00000558796 TEX261Q6UWH6 196 aa7.4□□□□□ -1.22
PBX1-213ENST00000558796 OR10G8Q8NGN5 311 aa7.4□□□□□ -1.22
PBX1-213ENST00000558796 GATCO43716 136 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms