RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SRP19P09132 144 aaKnown RBP9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 PIK3CD-AS1Q5SR53 167 aa9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 ZFP2Q6ZN57 461 aa9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 ZFP82Q8N141 532 aa9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 PRADC1Q9BSG0 188 aa9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 TPPP3Q9BW30 176 aa9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 GAGE12JA6NER3 117 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 TMEM250H0YL14 139 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 P01737 135 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 CXCL1P09341 107 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 MED14OSP0DP75 135 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 SRSF3P84103 164 aaKnown RBP9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 GAGE1Q13065 139 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 GAGE4Q13068 117 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 GAGE5Q13069 117 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 RHOHQ15669 191 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 GAGE13Q4V321 117 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 MSRB1Q9NZV6 116 aa9.46□□□□□ -0.9
TSPAN3-205ENST00000558745 C9JQL5 133 aa9.45□□□□□ -0.9
TSPAN3-205ENST00000558745 IGLC6P0CF74 106 aa9.45□□□□□ -0.9
TSPAN3-205ENST00000558745 C1orf134Q5TEV5 83 aa9.45□□□□□ -0.9
TSPAN3-205ENST00000558745 SPANXN1Q5VSR9 72 aa9.45□□□□□ -0.9
TSPAN3-205ENST00000558745 WFDC10BQ8IUB3 73 aa9.45□□□□□ -0.9
TSPAN3-205ENST00000558745 SMIM12Q96EX1 92 aa9.45□□□□□ -0.9
TSPAN3-205ENST00000558745 SIVA1O15304 175 aa9.44□□□□□ -0.9
TSPAN3-205ENST00000558745 OR5AL1P0C617 328 aa9.44□□□□□ -0.9
TSPAN3-205ENST00000558745 FER1L6-AS1Q8NA97 138 aa9.44□□□□□ -0.9
TSPAN3-205ENST00000558745 TNFRSF18Q9Y5U5 241 aa9.44□□□□□ -0.9
TSPAN3-205ENST00000558745 PRSS29PA6NIE9 313 aa9.43□□□□□ -0.9
TSPAN3-205ENST00000558745 RPS20P60866 119 aaKnown RBP9.43□□□□□ -0.9
TSPAN3-205ENST00000558745 LYZL1Q6UWQ5 148 aa9.43□□□□□ -0.9
TSPAN3-205ENST00000558745 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
TSPAN3-205ENST00000558745 ABCA13Q86UQ4 5058 aa9.42□□□□□ -0.9
TSPAN3-205ENST00000558745 ZNF727A8MUV8 499 aa9.42□□□□□ -0.9
TSPAN3-205ENST00000558745 RHODO00212 210 aa9.42□□□□□ -0.9
TSPAN3-205ENST00000558745 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
TSPAN3-205ENST00000558745 SMIM7Q9BQ49 75 aa9.42□□□□□ -0.9
TSPAN3-205ENST00000558745 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
TSPAN3-205ENST00000558745 RPP21Q9H633 154 aaKnown RBP9.41□□□□□ -0.9
TSPAN3-205ENST00000558745 KIF25-AS1Q9Y6Z4 181 aa9.41□□□□□ -0.9
TSPAN3-205ENST00000558745 PKD1P98161 4303 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 A0A1B0GVY2 172 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 F5H697 171 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 GATCO43716 136 aaKnown RBP9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 LINC00694P0DN24 101 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 LINC00315P59091 139 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 TNP2Q05952 138 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 ZNF56Q15929 161 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 SH2D6Q7Z4S9 175 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 DNAH11Q96DT5 4516 aa9.4□□□□□ -0.9
TSPAN3-205ENST00000558745 XKRY2A2RUG3 117 aa9.39□□□□□ -0.91
TSPAN3-205ENST00000558745 NTF3P20783 257 aa9.39□□□□□ -0.91
TSPAN3-205ENST00000558745 ERVFC1-1P60608 527 aa9.39□□□□□ -0.91
TSPAN3-205ENST00000558745 OR10J3Q5JRS4 329 aa9.39□□□□□ -0.91
TSPAN3-205ENST00000558745 LINC01551Q86U37 167 aa9.39□□□□□ -0.91
TSPAN3-205ENST00000558745 GTSF1Q8WW33 167 aa9.39□□□□□ -0.91
TSPAN3-205ENST00000558745 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
TSPAN3-205ENST00000558745 EVI2AP22794 236 aa9.38□□□□□ -0.91
TSPAN3-205ENST00000558745 RAB4BP61018 213 aa9.38□□□□□ -0.91
TSPAN3-205ENST00000558745 TTC32Q5I0X7 151 aa9.38□□□□□ -0.91
TSPAN3-205ENST00000558745 SOHLH1Q5JUK2 328 aa9.38□□□□□ -0.91
TSPAN3-205ENST00000558745 Q8N3U1 123 aa9.38□□□□□ -0.91
TSPAN3-205ENST00000558745 LY96Q9Y6Y9 160 aa9.38□□□□□ -0.91
TSPAN3-205ENST00000558745 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 A0A1W2PPQ1 181 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 F2Z2F3 143 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 NDUFS6O75380 124 aaKnown RBP9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 IGHV3-30P01768 117 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 MGPP08493 103 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 SMIM17P0DL12 118 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 IGHV3-30-5P0DP03 117 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 TIRAPP58753 221 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 CACNG7P62955 275 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 PEA15Q15121 130 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 LELP1Q5T871 98 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 FAM231DQ6ZW35 169 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 NEXN-AS1Q8NBZ9 246 aa9.37□□□□□ -0.91
TSPAN3-205ENST00000558745 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 DNAH10OSP0CZ25 163 aa9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 FOXA3P55318 350 aaPredicted RBP9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 RPL23P62829 140 aaKnown RBP9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 IFITM2Q01629 132 aa9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 TWIST1Q15672 202 aa9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 TMEM241Q24JQ0 296 aa9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 AP1S3Q96PC3 154 aa9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 DYNC1H1Q14204 4646 aaKnown RBP9.36□□□□□ -0.91
TSPAN3-205ENST00000558745 CTRLP40313 264 aa9.35□□□□□ -0.91
TSPAN3-205ENST00000558745 UBE2D3P61077 147 aa9.35□□□□□ -0.91
TSPAN3-205ENST00000558745 UBE2D2P62837 147 aa9.35□□□□□ -0.91
TSPAN3-205ENST00000558745 RPL36AP83881 106 aaKnown RBP9.35□□□□□ -0.91
TSPAN3-205ENST00000558745 RPL36ALQ969Q0 106 aaKnown RBP9.35□□□□□ -0.91
TSPAN3-205ENST00000558745 TRBV7-3A0A075B6L6 115 aa9.34□□□□□ -0.91
TSPAN3-205ENST00000558745 TRBV10-1A0A0K0K1A3 114 aa9.34□□□□□ -0.91
TSPAN3-205ENST00000558745 ADIRFQ15847 76 aa9.34□□□□□ -0.91
TSPAN3-205ENST00000558745 SUMO4Q6EEV6 95 aa9.34□□□□□ -0.91
TSPAN3-205ENST00000558745 OR10G8Q8NGN5 311 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms