RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 ITLN2Q8WWU7 325 aaPredicted RBP12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 DYNLRB1Q9NP97 96 aa12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 FAM215AQ9Y5M1 114 aa12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 CDX4O14627 284 aaPredicted RBP12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 LINC00315P59091 139 aa12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 ATP1A1-AS1Q5TC04 95 aa12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 C5orf38Q86SI9 138 aa12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 PEMTQ9UBM1 199 aa12.18□□□□□ -0.46
HMBOX1-212ENST00000558662 CLPSL1A2RUU4 121 aa12.17□□□□□ -0.46
HMBOX1-212ENST00000558662 M0R1W7 72 aa12.17□□□□□ -0.46
HMBOX1-212ENST00000558662 ATOX1O00244 68 aa12.17□□□□□ -0.46
HMBOX1-212ENST00000558662 MIAQ16674 131 aa12.17□□□□□ -0.46
HMBOX1-212ENST00000558662 PLA2G2CQ5R387 149 aa12.17□□□□□ -0.46
HMBOX1-212ENST00000558662 Q8N6K4 173 aa12.17□□□□□ -0.46
HMBOX1-212ENST00000558662 NCOR1O75376 2440 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 BDP1A6H8Y1 2624 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 TRBV7-1A0A0A6YYK4 115 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 UBE2E1P51965 193 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 C16orf92Q96LL3 132 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 FAM19A4Q96LR4 140 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 DUX3Q96PT4 197 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 LITAFQ99732 161 aa12.16□□□□□ -0.46
HMBOX1-212ENST00000558662 ODF3BA8MYP8 253 aa12.15□□□□□ -0.46
HMBOX1-212ENST00000558662 RNASE4P34096 147 aaKnown RBP12.15□□□□□ -0.46
HMBOX1-212ENST00000558662 FAM27E3Q08E93 113 aa12.15□□□□□ -0.46
HMBOX1-212ENST00000558662 DAND5Q8N907 189 aa12.15□□□□□ -0.46
HMBOX1-212ENST00000558662 BEX4Q9NWD9 120 aaPredicted RBP12.15□□□□□ -0.46
HMBOX1-212ENST00000558662 PRR9Q5T870 116 aa12.15□□□□□ -0.46
HMBOX1-212ENST00000558662 DCANP1Q8TF63 244 aa12.15□□□□□ -0.46
HMBOX1-212ENST00000558662 EEF1AKMT3Q96AZ1 226 aa12.15□□□□□ -0.46
HMBOX1-212ENST00000558662 IGHV3-23P01764 117 aa12.14□□□□□ -0.47
HMBOX1-212ENST00000558662 NDPQ00604 133 aa12.14□□□□□ -0.47
HMBOX1-212ENST00000558662 GAGE2AQ6NT46 116 aa12.14□□□□□ -0.47
HMBOX1-212ENST00000558662 FAM19A5Q7Z5A7 132 aaPredicted RBP12.14□□□□□ -0.47
HMBOX1-212ENST00000558662 COPS9Q8WXC6 57 aa12.14□□□□□ -0.47
HMBOX1-212ENST00000558662 ICE1Q9Y2F5 2266 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 RNASE3P12724 160 aaKnown RBP12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 RPL39P62891 51 aaKnown RBP12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 BSPH1Q075Z2 132 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 C15orf32Q32M92 178 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 TMEM61Q8N0U2 210 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 ATP5J2P56134 94 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 TMEM258P61165 79 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 HIST1H4AP62805 103 aaKnown RBP12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 MINOS1Q5TGZ0 78 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 TIMM21Q9BVV7 248 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 ARRDC1-AS1Q9H2J1 176 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 MINOS1-NBL1R4GNA1 71 aa12.13□□□□□ -0.47
HMBOX1-212ENST00000558662 INAFM2P0DMQ5 153 aa12.12□□□□□ -0.47
HMBOX1-212ENST00000558662 LPAL2Q16609 132 aa12.12□□□□□ -0.47
HMBOX1-212ENST00000558662 FAM222AQ5U5X8 452 aa12.12□□□□□ -0.47
HMBOX1-212ENST00000558662 MUC3AQ02505 3323 aa12.11□□□□□ -0.47
HMBOX1-212ENST00000558662 B9A039 149 aa12.11□□□□□ -0.47
HMBOX1-212ENST00000558662 I3L3M4 83 aa12.11□□□□□ -0.47
HMBOX1-212ENST00000558662 IGHV3-30-3P0DP02 117 aa12.11□□□□□ -0.47
HMBOX1-212ENST00000558662 C22orf34Q6ZV56 151 aa12.11□□□□□ -0.47
HMBOX1-212ENST00000558662 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
HMBOX1-212ENST00000558662 IGHV7-81A0A0B4J1V7 117 aa12.1□□□□□ -0.47
HMBOX1-212ENST00000558662 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
HMBOX1-212ENST00000558662 IGHV1-58A0A0C4DH39 117 aa12.1□□□□□ -0.47
HMBOX1-212ENST00000558662 TRACP01848 142 aa12.1□□□□□ -0.47
HMBOX1-212ENST00000558662 MRPS36P82909 103 aaKnown RBP12.1□□□□□ -0.47
HMBOX1-212ENST00000558662 UBTD1Q9HAC8 227 aa12.09□□□□□ -0.47
HMBOX1-212ENST00000558662 PRSS2P07478 247 aa12.08□□□□□ -0.48
HMBOX1-212ENST00000558662 IGFL3Q6UXB1 125 aa12.08□□□□□ -0.48
HMBOX1-212ENST00000558662 C2orf48Q96LS8 159 aa12.08□□□□□ -0.48
HMBOX1-212ENST00000558662 ZNF318Q5VUA4 2279 aa12.08□□□□□ -0.48
HMBOX1-212ENST00000558662 COX7A2LO14548 114 aa12.07□□□□□ -0.48
HMBOX1-212ENST00000558662 CLEC2BQ92478 149 aa12.07□□□□□ -0.48
HMBOX1-212ENST00000558662 SPEGQ15772 3267 aa12.07□□□□□ -0.48
HMBOX1-212ENST00000558662 CCDC140Q96MF4 163 aa12.07□□□□□ -0.48
HMBOX1-212ENST00000558662 NDUFA12Q9UI09 145 aa12.07□□□□□ -0.48
HMBOX1-212ENST00000558662 IGLV4-3A0A075B6K6 122 aa12.06□□□□□ -0.48
HMBOX1-212ENST00000558662 ZNF415Q09FC8 603 aa12.06□□□□□ -0.48
HMBOX1-212ENST00000558662 TRAV8-3A0A0A6YYJ7 113 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 SOCS3O14543 225 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 EDA2RQ9HAV5 297 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 TTC28Q96AY4 2481 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 FRYQ5TBA9 3013 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 F5H697 171 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 CLEC19AQ6UXS0 136 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 C3orf56Q8N813 242 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 Q8N9W7 124 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 C20orf173Q96LM9 149 aa12.05□□□□□ -0.48
HMBOX1-212ENST00000558662 IGHV3OR16-8A0A075B7F1 116 aa12.04□□□□□ -0.48
HMBOX1-212ENST00000558662 IGHV3-35A0A0C4DH35 117 aa12.04□□□□□ -0.48
HMBOX1-212ENST00000558662 TINCRA0A1B0GVN0 87 aa12.04□□□□□ -0.48
HMBOX1-212ENST00000558662 KLLNB2CW77 178 aa12.04□□□□□ -0.48
HMBOX1-212ENST00000558662 GNRH2O43555 120 aa12.04□□□□□ -0.48
HMBOX1-212ENST00000558662 CIRBPQ14011 172 aaKnown RBP12.04□□□□□ -0.48
HMBOX1-212ENST00000558662 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
HMBOX1-212ENST00000558662 E7EQL1 145 aa12.03□□□□□ -0.48
HMBOX1-212ENST00000558662 M0QY20 66 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms