RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 GNG13Q9P2W3 67 aa10.48□□□□□ -0.73
CSHL1-208ENST00000558609 TRAV8-6A0A0B4J262 113 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 GRIFINA4D1Z8 144 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 CCL20P78556 96 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 LINC01556Q5JQF7 62 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 SYT8Q8NBV8 401 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 ATP6V0E2Q8NHE4 81 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 LYPD6BQ8NI32 183 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 JPT2Q9H910 190 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 SCRT2Q9NQ03 307 aa10.47□□□□□ -0.73
CSHL1-208ENST00000558609 APOBP04114 4563 aaKnown RBP10.47□□□□□ -0.73
CSHL1-208ENST00000558609 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 RBFOX3A6NFN3 312 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 EREGO14944 169 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 ERVFC1-1P60608 527 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 TOR2AQ5JU69 321 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 LELP1Q5T871 98 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 UQCC3Q6UW78 93 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 FAM210AQ96ND0 272 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 SAMD10Q9BYL1 202 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 PGPEP1Q9NXJ5 209 aa10.46□□□□□ -0.73
CSHL1-208ENST00000558609 SCO2A0A1W2PP80 73 aa10.45□□□□□ -0.74
CSHL1-208ENST00000558609 RHODO00212 210 aa10.45□□□□□ -0.74
CSHL1-208ENST00000558609 LINC00694P0DN24 101 aa10.45□□□□□ -0.74
CSHL1-208ENST00000558609 S100A1P23297 94 aa10.45□□□□□ -0.74
CSHL1-208ENST00000558609 OR10J3Q5JRS4 329 aa10.45□□□□□ -0.74
CSHL1-208ENST00000558609 MLST8Q9BVC4 326 aa10.45□□□□□ -0.74
CSHL1-208ENST00000558609 PHLDA3Q9Y5J5 127 aa10.45□□□□□ -0.74
CSHL1-208ENST00000558609 A0A087WTM6 91 aa10.44□□□□□ -0.74
CSHL1-208ENST00000558609 TMSB15BA0A087X1C1 80 aa10.44□□□□□ -0.74
CSHL1-208ENST00000558609 TAGLN2P37802 199 aaKnown RBP10.44□□□□□ -0.74
CSHL1-208ENST00000558609 BAGE2Q86Y30 109 aa10.44□□□□□ -0.74
CSHL1-208ENST00000558609 SFRP2Q96HF1 295 aa10.44□□□□□ -0.74
CSHL1-208ENST00000558609 MANBALQ9NQG1 85 aa10.44□□□□□ -0.74
CSHL1-208ENST00000558609 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
CSHL1-208ENST00000558609 IBA57-AS1B1ANH7 110 aa10.43□□□□□ -0.74
CSHL1-208ENST00000558609 GAGE1Q13065 139 aa10.43□□□□□ -0.74
CSHL1-208ENST00000558609 GAGE4Q13068 117 aa10.43□□□□□ -0.74
CSHL1-208ENST00000558609 GAGE5Q13069 117 aa10.43□□□□□ -0.74
CSHL1-208ENST00000558609 GAGE13Q4V321 117 aa10.43□□□□□ -0.74
CSHL1-208ENST00000558609 C14orf178Q8N769 122 aaPredicted RBP10.43□□□□□ -0.74
CSHL1-208ENST00000558609 Q9UF83 564 aa10.43□□□□□ -0.74
CSHL1-208ENST00000558609 VAX2Q9UIW0 290 aa10.43□□□□□ -0.74
CSHL1-208ENST00000558609 CXCL1P09341 107 aa10.42□□□□□ -0.74
CSHL1-208ENST00000558609 CDPF1Q6NVV7 123 aa10.42□□□□□ -0.74
CSHL1-208ENST00000558609 ZFP82Q8N141 532 aa10.42□□□□□ -0.74
CSHL1-208ENST00000558609 SMDT1Q9H4I9 107 aa10.42□□□□□ -0.74
CSHL1-208ENST00000558609 M0R381 172 aa10.41□□□□□ -0.74
CSHL1-208ENST00000558609 BCL2P10415 239 aa10.41□□□□□ -0.74
CSHL1-208ENST00000558609 CEBPGP53567 150 aa10.41□□□□□ -0.74
CSHL1-208ENST00000558609 FAM74A4Q5TZK3 123 aa10.41□□□□□ -0.74
CSHL1-208ENST00000558609 C11orf52Q96A22 123 aa10.41□□□□□ -0.74
CSHL1-208ENST00000558609 A0A087WWC5 75 aa10.4□□□□□ -0.74
CSHL1-208ENST00000558609 A0A087WWL8 130 aa10.4□□□□□ -0.74
CSHL1-208ENST00000558609 SRSF3P84103 164 aaKnown RBP10.4□□□□□ -0.74
CSHL1-208ENST00000558609 F8W036 122 aa10.39□□□□□ -0.75
CSHL1-208ENST00000558609 IGHV3-30P01768 117 aa10.39□□□□□ -0.75
CSHL1-208ENST00000558609 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
CSHL1-208ENST00000558609 IGHV3-30-3P0DP02 117 aa10.39□□□□□ -0.75
CSHL1-208ENST00000558609 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
CSHL1-208ENST00000558609 RPL35P42766 123 aaKnown RBP10.39□□□□□ -0.75
CSHL1-208ENST00000558609 RPL19P84098 196 aaKnown RBP10.39□□□□□ -0.75
CSHL1-208ENST00000558609 MAPKAPK5-AS1Q8N8E1 139 aa10.39□□□□□ -0.75
CSHL1-208ENST00000558609 SSBP4Q9BWG4 385 aaPredicted RBP10.39□□□□□ -0.75
CSHL1-208ENST00000558609 TMEM218A2RU14 115 aa10.38□□□□□ -0.75
CSHL1-208ENST00000558609 SNAI2O43623 268 aa10.38□□□□□ -0.75
CSHL1-208ENST00000558609 FUSP35637 526 aaKnown RBP eCLIP10.38□□□□□ -0.75
CSHL1-208ENST00000558609 MEF2BQ02080 365 aaPredicted RBP10.38□□□□□ -0.75
CSHL1-208ENST00000558609 LAGE3Q14657 143 aa10.38□□□□□ -0.75
CSHL1-208ENST00000558609 OR10AG1Q8NH19 301 aa10.38□□□□□ -0.75
CSHL1-208ENST00000558609 DERL1Q9BUN8 251 aa10.38□□□□□ -0.75
CSHL1-208ENST00000558609 TRBV10-1A0A0K0K1A3 114 aa10.37□□□□□ -0.75
CSHL1-208ENST00000558609 LRCOL1A6NCL2 159 aa10.37□□□□□ -0.75
CSHL1-208ENST00000558609 PSCAO43653 123 aa10.37□□□□□ -0.75
CSHL1-208ENST00000558609 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
CSHL1-208ENST00000558609 PRR27Q6MZM9 219 aa10.37□□□□□ -0.75
CSHL1-208ENST00000558609 SRP19P09132 144 aaKnown RBP10.36□□□□□ -0.75
CSHL1-208ENST00000558609 Q8N1X5 172 aa10.36□□□□□ -0.75
CSHL1-208ENST00000558609 Q9HAA7 133 aa10.36□□□□□ -0.75
CSHL1-208ENST00000558609 TRBV7-3A0A075B6L6 115 aa10.35□□□□□ -0.75
CSHL1-208ENST00000558609 PDE6DO43924 150 aa10.35□□□□□ -0.75
CSHL1-208ENST00000558609 RAB4BP61018 213 aa10.35□□□□□ -0.75
CSHL1-208ENST00000558609 RPL36AP83881 106 aaKnown RBP10.35□□□□□ -0.75
CSHL1-208ENST00000558609 CENPWQ5EE01 88 aa10.35□□□□□ -0.75
CSHL1-208ENST00000558609 Q8N3U1 123 aa10.35□□□□□ -0.75
CSHL1-208ENST00000558609 RPL36ALQ969Q0 106 aaKnown RBP10.35□□□□□ -0.75
CSHL1-208ENST00000558609 SMIM12Q96EX1 92 aa10.35□□□□□ -0.75
CSHL1-208ENST00000558609 C9JQL5 133 aa10.34□□□□□ -0.75
CSHL1-208ENST00000558609 IGLV2-8P01709 118 aa10.34□□□□□ -0.75
CSHL1-208ENST00000558609 APOC3P02656 99 aa10.34□□□□□ -0.75
CSHL1-208ENST00000558609 UBE2D3P61077 147 aa10.34□□□□□ -0.75
CSHL1-208ENST00000558609 UBE2D2P62837 147 aa10.34□□□□□ -0.75
CSHL1-208ENST00000558609 SPANXN1Q5VSR9 72 aa10.34□□□□□ -0.75
CSHL1-208ENST00000558609 OR10G8Q8NGN5 311 aa10.34□□□□□ -0.75
CSHL1-208ENST00000558609 TM2D2Q9BX73 214 aa10.34□□□□□ -0.75
CSHL1-208ENST00000558609 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
CSHL1-208ENST00000558609 MUC21A0A0G2JKD1 596 aa10.33□□□□□ -0.76
CSHL1-208ENST00000558609 MUC21A0A140T8X8 626 aa10.33□□□□□ -0.76
CSHL1-208ENST00000558609 KRTAP10-1P60331 282 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms