RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
HERC1-202ENST00000558324 COX8CQ7Z4L0 72 aa8.01□□□□□ -1.13
HERC1-202ENST00000558324 Q8N1X5 172 aa8.01□□□□□ -1.13
HERC1-202ENST00000558324 MBD3L1Q8WWY6 194 aa8.01□□□□□ -1.13
HERC1-202ENST00000558324 IBA57-AS1B1ANH7 110 aa8□□□□□ -1.13
HERC1-202ENST00000558324 RHODO00212 210 aa8□□□□□ -1.13
HERC1-202ENST00000558324 H2AFB1P0C5Y9 115 aa8□□□□□ -1.13
HERC1-202ENST00000558324 LINC00694P0DN24 101 aa8□□□□□ -1.13
HERC1-202ENST00000558324 RPL19P84098 196 aaKnown RBP8□□□□□ -1.13
HERC1-202ENST00000558324 DNLZQ5SXM8 178 aa8□□□□□ -1.13
HERC1-202ENST00000558324 TMUB2Q71RG4 321 aa8□□□□□ -1.13
HERC1-202ENST00000558324 KRTAP10-1P60331 282 aa7.99□□□□□ -1.13
HERC1-202ENST00000558324 EIF5AP63241 154 aaKnown RBP7.99□□□□□ -1.13
HERC1-202ENST00000558324 PRR27Q6MZM9 219 aa7.99□□□□□ -1.13
HERC1-202ENST00000558324 ZFP82Q8N141 532 aa7.99□□□□□ -1.13
HERC1-202ENST00000558324 BAGE2Q86Y30 109 aa7.98□□□□□ -1.13
HERC1-202ENST00000558324 SFRP2Q96HF1 295 aa7.98□□□□□ -1.13
HERC1-202ENST00000558324 GNG13Q9P2W3 67 aa7.98□□□□□ -1.13
HERC1-202ENST00000558324 BOLA1Q9Y3E2 137 aa7.98□□□□□ -1.13
HERC1-202ENST00000558324 MUC21A0A0G2JKD1 596 aa7.97□□□□□ -1.13
HERC1-202ENST00000558324 MUC21A0A140T8X8 626 aa7.97□□□□□ -1.13
HERC1-202ENST00000558324 LRCOL1A6NCL2 159 aa7.97□□□□□ -1.13
HERC1-202ENST00000558324 S100A9P06702 114 aaKnown RBP7.97□□□□□ -1.13
HERC1-202ENST00000558324 SSTP61278 116 aa7.97□□□□□ -1.13
HERC1-202ENST00000558324 CCL20P78556 96 aa7.97□□□□□ -1.13
HERC1-202ENST00000558324 DAZ4Q86SG3 579 aaKnown RBP7.97□□□□□ -1.13
HERC1-202ENST00000558324 OR10AG1Q8NH19 301 aa7.97□□□□□ -1.13
HERC1-202ENST00000558324 DAZ3Q9NR90 486 aaKnown RBP7.97□□□□□ -1.13
HERC1-202ENST00000558324 A0A087WWC5 75 aa7.96□□□□□ -1.14
HERC1-202ENST00000558324 IGLV5-52A0A0A0MRZ9 124 aa7.96□□□□□ -1.14
HERC1-202ENST00000558324 GCSHP23434 173 aa7.96□□□□□ -1.14
HERC1-202ENST00000558324 RPL35P42766 123 aaKnown RBP7.96□□□□□ -1.14
HERC1-202ENST00000558324 HAMPP81172 84 aa7.96□□□□□ -1.14
HERC1-202ENST00000558324 LAGE3Q14657 143 aa7.96□□□□□ -1.14
HERC1-202ENST00000558324 DERL1Q9BUN8 251 aa7.96□□□□□ -1.14
HERC1-202ENST00000558324 MLST8Q9BVC4 326 aa7.96□□□□□ -1.14
HERC1-202ENST00000558324 XGP55808 180 aa7.95□□□□□ -1.14
HERC1-202ENST00000558324 ZNF56Q15929 161 aa7.95□□□□□ -1.14
HERC1-202ENST00000558324 Q8N814 137 aa7.95□□□□□ -1.14
HERC1-202ENST00000558324 MANBALQ9NQG1 85 aa7.95□□□□□ -1.14
HERC1-202ENST00000558324 URGCP-MRPS24S4R325 110 aa7.95□□□□□ -1.14
HERC1-202ENST00000558324 EPM2AB3EWF7 344 aa7.94□□□□□ -1.14
HERC1-202ENST00000558324 LECT2O14960 151 aa7.94□□□□□ -1.14
HERC1-202ENST00000558324 RPL36AP83881 106 aaKnown RBP7.94□□□□□ -1.14
HERC1-202ENST00000558324 WFDC2Q14508 124 aa7.94□□□□□ -1.14
HERC1-202ENST00000558324 CENPWQ5EE01 88 aa7.94□□□□□ -1.14
HERC1-202ENST00000558324 SPANXN1Q5VSR9 72 aa7.94□□□□□ -1.14
HERC1-202ENST00000558324 RPL36ALQ969Q0 106 aaKnown RBP7.94□□□□□ -1.14
HERC1-202ENST00000558324 TM2D2Q9BX73 214 aa7.94□□□□□ -1.14
HERC1-202ENST00000558324 TRAV8-3A0A0A6YYJ7 113 aa7.93□□□□□ -1.14
HERC1-202ENST00000558324 TRBV10-1A0A0K0K1A3 114 aa7.93□□□□□ -1.14
HERC1-202ENST00000558324 NIT1Q86X76 327 aa7.93□□□□□ -1.14
HERC1-202ENST00000558324 NTN5Q8WTR8 489 aaPredicted RBP7.93□□□□□ -1.14
HERC1-202ENST00000558324 C11orf52Q96A22 123 aa7.93□□□□□ -1.14
HERC1-202ENST00000558324 DNAJC30Q96LL9 226 aa7.93□□□□□ -1.14
HERC1-202ENST00000558324 TPPP3Q9BW30 176 aa7.93□□□□□ -1.14
HERC1-202ENST00000558324 TRBV7-3A0A075B6L6 115 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 F5H697 171 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 TEX46H3BTG2 121 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 SNAI2O43623 268 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 CXCL1P09341 107 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 GZMBP10144 247 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 RAB5CP51148 216 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 RAB4BP61018 213 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 UBE2D3P61077 147 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 UBE2D2P62837 147 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 TOR2AQ5JU69 321 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 EIF5AL1Q6IS14 154 aaKnown RBP7.92□□□□□ -1.14
HERC1-202ENST00000558324 KLK12Q9UKR0 248 aa7.92□□□□□ -1.14
HERC1-202ENST00000558324 A0A087WX48 190 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 TRAV1-1A0A0B4J248 108 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 RAB19A4D1S5 217 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 RBFOX3A6NFN3 312 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 SMR3BP02814 79 aaPredicted RBP7.91□□□□□ -1.14
HERC1-202ENST00000558324 OR5AL1P0C617 328 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 SULT1A2P50226 295 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 KCNIP4Q6PIL6 250 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 TCTE3Q8IZS6 198 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 UBE2WQ96B02 151 aa7.91□□□□□ -1.14
HERC1-202ENST00000558324 FAT1Q14517 4588 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.9□□□□□ -1.14
HERC1-202ENST00000558324 IGKV2D-24A0A075B6R9 120 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 TMEM262E9PQX1 116 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 SMIM17P0DL12 118 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 GNG4P50150 75 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 MEF2BQ02080 365 aaPredicted RBP7.9□□□□□ -1.14
HERC1-202ENST00000558324 Q5VSD8 79 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 OR2D3Q8NGH3 330 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 OR10G8Q8NGN5 311 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 BAALCQ8WXS3 180 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 DAZAP1Q96EP5 407 aaKnown RBP7.9□□□□□ -1.14
HERC1-202ENST00000558324 AP1S3Q96PC3 154 aa7.9□□□□□ -1.14
HERC1-202ENST00000558324 SSBP4Q9BWG4 385 aaPredicted RBP7.9□□□□□ -1.14
HERC1-202ENST00000558324 hCG_2014768A0A024R1R8 64 aa7.89□□□□□ -1.15
HERC1-202ENST00000558324 IFNA1P01562 189 aa7.89□□□□□ -1.15
HERC1-202ENST00000558324 IGLV2-8P01709 118 aa7.89□□□□□ -1.15
HERC1-202ENST00000558324 MGPP08493 103 aa7.89□□□□□ -1.15
HERC1-202ENST00000558324 SLC51BQ86UW2 128 aa7.89□□□□□ -1.15
HERC1-202ENST00000558324 FRZBQ92765 325 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms