RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 VCX2Q9H322 139 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 EDA2RQ9HAV5 297 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 CYSLTR1Q9Y271 337 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 TACC2O95359 2948 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 SMG1Q96Q15 3661 aaKnown RBP6.2□□□□□ -1.42
SPG11-209ENST00000558253 NCOR2Q9Y618 2525 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 IGKV3-7A0A075B6H7 116 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 TRAV8-6A0A0B4J262 113 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 TRAV12-3A0A0B4J271 114 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 TRBV27A0A0K0K1C4 114 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 J3KRW8 73 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 ZNF688P0C7X2 276 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 NMUP48645 174 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 POLR2KP53803 58 aaKnown RBP6.19□□□□□ -1.42
SPG11-209ENST00000558253 LINC00315P59091 139 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 RHOHQ15669 191 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 TMEM95Q3KNT9 176 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 CD300EQ496F6 205 aaPredicted RBP6.19□□□□□ -1.42
SPG11-209ENST00000558253 ZC2HC1BQ5TFG8 222 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 TRPT1Q86TN4 253 aaKnown RBP6.19□□□□□ -1.42
SPG11-209ENST00000558253 NEXN-AS1Q8NBZ9 246 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 TIMM17AQ99595 171 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 SPANXA1Q9NS26 97 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 TMEM160Q9NX00 188 aa6.19□□□□□ -1.42
SPG11-209ENST00000558253 ZNF256Q9Y2P7 627 aaPredicted RBP6.19□□□□□ -1.42
SPG11-209ENST00000558253 A0A1W2PPM0 123 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 F8W1H4 67 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 SRD5A1P18405 259 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 RIPPLY3P57055 190 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 FXYD7P58549 80 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 HERVK_113P61574 105 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 C2orf66Q6UXQ4 117 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 Q6ZQT7 251 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 Q6ZVH6 145 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 Q96MF0 132 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 MRPL35Q9NZE8 188 aaKnown RBP6.18□□□□□ -1.42
SPG11-209ENST00000558253 SPCS1Q9Y6A9 102 aa6.18□□□□□ -1.42
SPG11-209ENST00000558253 PKD1L2Q7Z442 2459 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 PIEZO1Q92508 2521 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 F5H697 171 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 SMIM13P0DJ93 91 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 SUMO4Q6EEV6 95 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 AMTNQ6UX39 209 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 Q8N1Y9 231 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 BBC3Q96PG8 261 aaPredicted RBP6.17□□□□□ -1.42
SPG11-209ENST00000558253 DUX5Q96PT3 197 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 SPAG8Q99932 426 aaPredicted RBP6.17□□□□□ -1.42
SPG11-209ENST00000558253 SPATA25Q9BR10 227 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 TM2D2Q9BX73 214 aa6.17□□□□□ -1.42
SPG11-209ENST00000558253 ABCA2Q9BZC7 2435 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 IGIPA6NJ69 53 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 A8MWV9 139 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 OR11H12B2RN74 326 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 E9PLD3 99 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 PRB1P04280 392 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 CRYBA4P53673 196 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 PMVKQ15126 192 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 NSUN5P1Q3KNT7 163 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 ZFP2Q6ZN57 461 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 PCP2Q8IVA1 136 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 OR11H1Q8NG94 326 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 OR11H2Q8NH07 326 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 BAALCQ8WXS3 180 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 RPL39LQ96EH5 51 aaKnown RBP6.16□□□□□ -1.42
SPG11-209ENST00000558253 SPXQ9BT56 116 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 CHAC1Q9BUX1 264 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 C19orf73Q9NVV2 129 aa6.16□□□□□ -1.42
SPG11-209ENST00000558253 TRBV25-1A0A075B6N4 114 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 MYMXA0A1B0GTQ4 84 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 PRSS29PA6NIE9 313 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 H3BMM0 161 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 H3BUT2 72 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 I3L3M4 83 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 M0QY20 66 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 RHODO00212 210 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 SAP30O75446 220 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 CRYGDP07320 174 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 AZU1P20160 251 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 DEFB1P60022 68 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 C10orf99Q6UWK7 81 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 GTSCR1Q86UQ5 136 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 CEND1Q8N111 149 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 DYNLRB2Q8TF09 96 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 RAX2Q96IS3 184 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 CHD8Q9HCK8 2581 aa6.15□□□□□ -1.42
SPG11-209ENST00000558253 MED13LQ71F56 2210 aa6.15□□□□□ -1.43
SPG11-209ENST00000558253 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 SDHAF1A6NFY7 115 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 M0R2P5 195 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 ZNF415Q09FC8 603 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 SPINK13Q1W4C9 94 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 DEFB114Q30KQ6 69 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 ZNF876PQ49A33 203 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 MAPK1IP1LQ8NDC0 245 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 ATP6V0E2Q8NHE4 81 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 DNAJC30Q96LL9 226 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 MDFICQ9P1T7 246 aa6.14□□□□□ -1.43
SPG11-209ENST00000558253 PRRC2AP48634 2157 aaKnown RBP6.13□□□□□ -1.43
SPG11-209ENST00000558253 IGKV2D-26A0A0A0MRZ7 120 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms