RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 RHODO00212 210 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 BCL2L11O43521 198 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 CRYGDP07320 174 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 LELP1Q5T871 98 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 EIF5AL1Q6IS14 154 aaKnown RBP6.84□□□□□ -1.31
USP3-207ENST00000558218 OR11H4Q8NGC9 324 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 ATP6V0E2Q8NHE4 81 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 ZC2HC1AQ96GY0 325 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 ZNF471Q9BX82 626 aaPredicted RBP6.84□□□□□ -1.31
USP3-207ENST00000558218 PARLQ9H300 379 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 SCRT2Q9NQ03 307 aa6.84□□□□□ -1.31
USP3-207ENST00000558218 A0A087WWC5 75 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 TRAV1-1A0A0B4J248 108 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 IBA57-AS1B1ANH7 110 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 PAGE4O60829 102 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 SH2D1AO60880 128 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 TPT1P13693 172 aaKnown RBP6.83□□□□□ -1.32
USP3-207ENST00000558218 AKR1C3P42330 323 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 RAB5CP51148 216 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 KRTAP10-2P60368 255 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 UFSP1Q6NVU6 142 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 FAM213BQ8TBF2 198 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 PHLDA3Q9Y5J5 127 aa6.83□□□□□ -1.32
USP3-207ENST00000558218 A0A087WTM6 91 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 IGHV3-73A0A0B4J1V6 119 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 PFDN1O60925 122 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 CXCL1P09341 107 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 OR10J3Q5JRS4 329 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 TMUB2Q71RG4 321 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 SFRP2Q96HF1 295 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 TNFRSF18Q9Y5U5 241 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 DNAH11Q96DT5 4516 aa6.82□□□□□ -1.32
USP3-207ENST00000558218 TRBV10-1A0A0K0K1A3 114 aa6.81□□□□□ -1.32
USP3-207ENST00000558218 TEX46H3BTG2 121 aa6.81□□□□□ -1.32
USP3-207ENST00000558218 H3BVH4 76 aa6.81□□□□□ -1.32
USP3-207ENST00000558218 LINC00694P0DN24 101 aa6.81□□□□□ -1.32
USP3-207ENST00000558218 LAGE3Q14657 143 aa6.81□□□□□ -1.32
USP3-207ENST00000558218 Q6ZSN1 163 aa6.81□□□□□ -1.32
USP3-207ENST00000558218 ZFP82Q8N141 532 aa6.81□□□□□ -1.32
USP3-207ENST00000558218 MLST8Q9BVC4 326 aa6.81□□□□□ -1.32
USP3-207ENST00000558218 M0R036 132 aa6.8□□□□□ -1.32
USP3-207ENST00000558218 TOR2AQ5JU69 321 aa6.8□□□□□ -1.32
USP3-207ENST00000558218 BAGE2Q86Y30 109 aa6.8□□□□□ -1.32
USP3-207ENST00000558218 TM2D2Q9BX73 214 aa6.8□□□□□ -1.32
USP3-207ENST00000558218 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
USP3-207ENST00000558218 MANBALQ9NQG1 85 aa6.8□□□□□ -1.32
USP3-207ENST00000558218 GRIFINA4D1Z8 144 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 GAGE12JA6NER3 117 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 GAGE1Q13065 139 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 GAGE4Q13068 117 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 GAGE5Q13069 117 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 GAGE13Q4V321 117 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 TCTE3Q8IZS6 198 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 Q8N1X5 172 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 MAPKAPK5-AS1Q8N8E1 139 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 SAMD10Q9BYL1 202 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 JPT2Q9H910 190 aa6.79□□□□□ -1.32
USP3-207ENST00000558218 DYNC1H1Q14204 4646 aaKnown RBP6.79□□□□□ -1.32
USP3-207ENST00000558218 TRAV8-3A0A0A6YYJ7 113 aa6.78□□□□□ -1.32
USP3-207ENST00000558218 PSCAO43653 123 aa6.78□□□□□ -1.32
USP3-207ENST00000558218 OR5AL1P0C617 328 aa6.78□□□□□ -1.32
USP3-207ENST00000558218 RAB4BP61018 213 aa6.78□□□□□ -1.32
USP3-207ENST00000558218 NTN5Q8WTR8 489 aaPredicted RBP6.78□□□□□ -1.32
USP3-207ENST00000558218 C11orf52Q96A22 123 aa6.78□□□□□ -1.32
USP3-207ENST00000558218 SMIM12Q96EX1 92 aa6.78□□□□□ -1.32
USP3-207ENST00000558218 COX11Q9Y6N1 276 aa6.78□□□□□ -1.32
USP3-207ENST00000558218 TRBV7-3A0A075B6L6 115 aa6.77□□□□□ -1.33
USP3-207ENST00000558218 LRCOL1A6NCL2 159 aa6.77□□□□□ -1.33
USP3-207ENST00000558218 M0R381 172 aa6.77□□□□□ -1.33
USP3-207ENST00000558218 SNAI2O43623 268 aa6.77□□□□□ -1.33
USP3-207ENST00000558218 TAGLN2P37802 199 aaKnown RBP6.77□□□□□ -1.33
USP3-207ENST00000558218 SULT1A2P50226 295 aa6.77□□□□□ -1.33
USP3-207ENST00000558218 RPL36AP83881 106 aaKnown RBP6.77□□□□□ -1.33
USP3-207ENST00000558218 FAM74A4Q5TZK3 123 aa6.77□□□□□ -1.33
USP3-207ENST00000558218 C14orf178Q8N769 122 aaPredicted RBP6.77□□□□□ -1.33
USP3-207ENST00000558218 OR10G8Q8NGN5 311 aa6.77□□□□□ -1.33
USP3-207ENST00000558218 RPL36ALQ969Q0 106 aaKnown RBP6.77□□□□□ -1.33
USP3-207ENST00000558218 CHCHD7Q9BUK0 85 aa6.77□□□□□ -1.33
USP3-207ENST00000558218 A0A087WWL8 130 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 TMSB15BA0A087X1C1 80 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 PDE6DO43924 150 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 IGHV3-30P01768 117 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 IGHV3-33P01772 117 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 IGHV3-30-3P0DP02 117 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 IGHV3-30-5P0DP03 117 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 GCSHP23434 173 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 RPL35P42766 123 aaKnown RBP6.76□□□□□ -1.33
USP3-207ENST00000558218 RPS20P60866 119 aaKnown RBP6.76□□□□□ -1.33
USP3-207ENST00000558218 ELOBQ15370 118 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 SLC51BQ86UW2 128 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.76□□□□□ -1.33
USP3-207ENST00000558218 BIN3Q9NQY0 253 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 GNG13Q9P2W3 67 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 URGCP-MRPS24S4R325 110 aa6.76□□□□□ -1.33
USP3-207ENST00000558218 A0A1B0GV50 99 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 IFNA1P01562 189 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 C1QBP02746 253 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 UBE2D3P61077 147 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 UBE2D2P62837 147 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms