RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 DEFB131BA0A096LNP1 70 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 TRAV10A0A0B4J240 114 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 F5H768 121 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 ATP5G1P05496 136 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 CXCL1P09341 107 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 ADCYAP1P18509 176 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 LINC00612Q8N6U2 182 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 FER1L6-AS1Q8NA97 138 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 RASL10AQ92737 203 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 SFRP2Q96HF1 295 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 OSTCQ9NRP0 149 aa8.49□□□□□ -1.05
HMGB1P8-201ENST00000558211 SPANXN1Q5VSR9 72 aa8.48□□□□□ -1.05
HMGB1P8-201ENST00000558211 SLC7A5P1Q8MH63 180 aa8.48□□□□□ -1.05
HMGB1P8-201ENST00000558211 OR4C5Q8NGB2 326 aa8.48□□□□□ -1.05
HMGB1P8-201ENST00000558211 OR10AG1Q8NH19 301 aa8.48□□□□□ -1.05
HMGB1P8-201ENST00000558211 DNAH7Q8WXX0 4024 aa8.48□□□□□ -1.05
HMGB1P8-201ENST00000558211 IGHV3-73A0A0B4J1V6 119 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 A8MWL6 223 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 IGLC6P0CF74 106 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 CEMP1Q6PRD7 247 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 LYZL1Q6UWQ5 148 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 ZFP82Q8N141 532 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 SEC11CQ9BY50 192 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 JPT2Q9H910 190 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 V9GYV3 84 aa8.47□□□□□ -1.05
HMGB1P8-201ENST00000558211 IGLL5B9A064 214 aa8.46□□□□□ -1.06
HMGB1P8-201ENST00000558211 SNAI2O43623 268 aa8.46□□□□□ -1.06
HMGB1P8-201ENST00000558211 OR5AL1P0C617 328 aa8.46□□□□□ -1.06
HMGB1P8-201ENST00000558211 PNRC1Q12796 327 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P8-201ENST00000558211 POM121L12Q8N7R1 296 aa8.46□□□□□ -1.06
HMGB1P8-201ENST00000558211 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
HMGB1P8-201ENST00000558211 ZNF479Q96JC4 524 aa8.46□□□□□ -1.06
HMGB1P8-201ENST00000558211 PGLYRP4Q96LB8 373 aa8.46□□□□□ -1.06
HMGB1P8-201ENST00000558211 TRAV4A0A0B4J268 109 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 TRGV4A0A0C4DH28 118 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 A0A0J9YY99 117 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 A0A1W2PPQ1 181 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 NUPR2A6NF83 97 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 C3orf84H3BNL1 204 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 RS1O15537 224 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 RNF212Q495C1 297 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 CFAP126Q5VTH2 177 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 TSKUQ8WUA8 353 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 PTH2Q96A98 100 aa8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 KLK5Q9Y337 293 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P8-201ENST00000558211 A8MWV9 139 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 F2Z2F3 143 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 MT-ND4LP03901 98 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 FAM74A4Q5TZK3 123 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 C18orf15Q96N68 181 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 SAMD10Q9BYL1 202 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 KRTAP4-2Q9BYR5 136 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 MSRB1Q9NZV6 116 aa8.44□□□□□ -1.06
HMGB1P8-201ENST00000558211 HIGD1CA8MV81 97 aa8.43□□□□□ -1.06
HMGB1P8-201ENST00000558211 PPP1R2P9O14990 202 aa8.43□□□□□ -1.06
HMGB1P8-201ENST00000558211 NTF3P20783 257 aa8.43□□□□□ -1.06
HMGB1P8-201ENST00000558211 CACNG7P62955 275 aa8.43□□□□□ -1.06
HMGB1P8-201ENST00000558211 FHL2Q14192 279 aa8.43□□□□□ -1.06
HMGB1P8-201ENST00000558211 TWIST1Q15672 202 aa8.43□□□□□ -1.06
HMGB1P8-201ENST00000558211 TMEM88Q6PEY1 159 aa8.43□□□□□ -1.06
HMGB1P8-201ENST00000558211 BORCS7Q96B45 105 aa8.43□□□□□ -1.06
HMGB1P8-201ENST00000558211 IGHV4-4A0A075B6R2 117 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 TRAV26-1A0A087WT03 109 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 APOC3P02656 99 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 CTRLP40313 264 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 NDUFA5Q16718 116 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 PIK3CD-AS1Q5SR53 167 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 C10orf91Q5T1B1 145 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 C14orf178Q8N769 122 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 NDUFAF3Q9BU61 184 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 GFRA4Q9GZZ7 299 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 HHLA3Q9XRX5 114 aa8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 CARHSP1Q9Y2V2 147 aaKnown RBP8.42□□□□□ -1.06
HMGB1P8-201ENST00000558211 NXPH4O95158 308 aa8.41□□□□□ -1.06
HMGB1P8-201ENST00000558211 NUDT3O95989 172 aa8.41□□□□□ -1.06
HMGB1P8-201ENST00000558211 CRYGDP07320 174 aa8.41□□□□□ -1.06
HMGB1P8-201ENST00000558211 SMIM17P0DL12 118 aa8.41□□□□□ -1.06
HMGB1P8-201ENST00000558211 FOXA3P55318 350 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P8-201ENST00000558211 NUP35Q8NFH5 326 aa8.41□□□□□ -1.06
HMGB1P8-201ENST00000558211 NAT8BQ9UHF3 227 aa8.41□□□□□ -1.06
HMGB1P8-201ENST00000558211 SMIM27A0A1W2PRY6 76 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 FAM231BA6NCW3 169 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 SLPIP03973 132 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 MGPP08493 103 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 CRYBA4P53673 196 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 TIRAPP58753 221 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 WDR73Q6P4I2 378 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 PRO0255Q9UI72 69 aa8.4□□□□□ -1.06
HMGB1P8-201ENST00000558211 A0A1B0GUT8 65 aa8.39□□□□□ -1.07
HMGB1P8-201ENST00000558211 C7orf77A4D0Y5 90 aa8.39□□□□□ -1.07
HMGB1P8-201ENST00000558211 RHODO00212 210 aa8.39□□□□□ -1.07
HMGB1P8-201ENST00000558211 CIDEAO60543 219 aa8.39□□□□□ -1.07
HMGB1P8-201ENST00000558211 TRGC1P0CF51 173 aa8.39□□□□□ -1.07
HMGB1P8-201ENST00000558211 GATA1P15976 413 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P8-201ENST00000558211 EVI2AP22794 236 aa8.39□□□□□ -1.07
HMGB1P8-201ENST00000558211 FAM3BP58499 235 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P8-201ENST00000558211 SLAQ13239 276 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms