RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 LTAP01374 205 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 ARMS2P0C7Q2 107 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 LINC00694P0DN24 101 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 S100A4P26447 101 aaKnown RBP7.09□□□□□ -1.27
PSMC6-215ENST00000557517 Q86TA4 180 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 STOML3Q8TAV4 291 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 ZC2HC1AQ96GY0 325 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 FMC1Q96HJ9 113 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 SAMD10Q9BYL1 202 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 MAP1LC3BQ9GZQ8 125 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 JPT2Q9H910 190 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 Q9UF83 564 aa7.09□□□□□ -1.27
PSMC6-215ENST00000557517 EPM2AB3EWF7 344 aa7.08□□□□□ -1.28
PSMC6-215ENST00000557517 B4DEV8 164 aa7.08□□□□□ -1.28
PSMC6-215ENST00000557517 UMAD1C9J7I0 102 aa7.08□□□□□ -1.28
PSMC6-215ENST00000557517 SMLR1H3BR10 107 aa7.08□□□□□ -1.28
PSMC6-215ENST00000557517 FUSP35637 526 aaKnown RBP eCLIP7.08□□□□□ -1.28
PSMC6-215ENST00000557517 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
PSMC6-215ENST00000557517 LGALSLQ3ZCW2 172 aaPredicted RBP7.08□□□□□ -1.28
PSMC6-215ENST00000557517 OR10J3Q5JRS4 329 aa7.08□□□□□ -1.28
PSMC6-215ENST00000557517 FAM162BQ5T6X4 162 aa7.08□□□□□ -1.28
PSMC6-215ENST00000557517 OR11H4Q8NGC9 324 aa7.08□□□□□ -1.28
PSMC6-215ENST00000557517 MYCBP2O75592 4640 aa7.07□□□□□ -1.28
PSMC6-215ENST00000557517 A0A0D9SG52 128 aa7.07□□□□□ -1.28
PSMC6-215ENST00000557517 SH2D1AO60880 128 aa7.07□□□□□ -1.28
PSMC6-215ENST00000557517 CST9LP1Q5W188 147 aa7.07□□□□□ -1.28
PSMC6-215ENST00000557517 SFT2D1Q8WV19 159 aa7.07□□□□□ -1.28
PSMC6-215ENST00000557517 SFRP2Q96HF1 295 aa7.07□□□□□ -1.28
PSMC6-215ENST00000557517 MLST8Q9BVC4 326 aa7.07□□□□□ -1.28
PSMC6-215ENST00000557517 A0A087WWC5 75 aa7.06□□□□□ -1.28
PSMC6-215ENST00000557517 M0R036 132 aa7.06□□□□□ -1.28
PSMC6-215ENST00000557517 PAGE4O60829 102 aa7.06□□□□□ -1.28
PSMC6-215ENST00000557517 S100A9P06702 114 aaKnown RBP7.06□□□□□ -1.28
PSMC6-215ENST00000557517 GCSHP23434 173 aa7.06□□□□□ -1.28
PSMC6-215ENST00000557517 UBE2G1P62253 170 aa7.06□□□□□ -1.28
PSMC6-215ENST00000557517 LAGE3Q14657 143 aa7.06□□□□□ -1.28
PSMC6-215ENST00000557517 SYT8Q8NBV8 401 aa7.06□□□□□ -1.28
PSMC6-215ENST00000557517 GRIFINA4D1Z8 144 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 GAGE12JA6NER3 117 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 H3BVH4 76 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 RHODO00212 210 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 IGHV3-30P01768 117 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 IGHV3-33P01772 117 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 IGHV3-30-3P0DP02 117 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 IGHV3-30-5P0DP03 117 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 GAGE1Q13065 139 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 GAGE4Q13068 117 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 GAGE5Q13069 117 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 GAGE13Q4V321 117 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 C14orf178Q8N769 122 aaPredicted RBP7.05□□□□□ -1.28
PSMC6-215ENST00000557517 NTN5Q8WTR8 489 aaPredicted RBP7.05□□□□□ -1.28
PSMC6-215ENST00000557517 PHLDA3Q9Y5J5 127 aa7.05□□□□□ -1.28
PSMC6-215ENST00000557517 PSCAO43653 123 aa7.04□□□□□ -1.28
PSMC6-215ENST00000557517 INAFM2P0DMQ5 153 aa7.04□□□□□ -1.28
PSMC6-215ENST00000557517 TPT1P13693 172 aaKnown RBP7.04□□□□□ -1.28
PSMC6-215ENST00000557517 TMUB2Q71RG4 321 aa7.04□□□□□ -1.28
PSMC6-215ENST00000557517 Q8N814 137 aa7.04□□□□□ -1.28
PSMC6-215ENST00000557517 TM2D2Q9BX73 214 aa7.04□□□□□ -1.28
PSMC6-215ENST00000557517 FAT1Q14517 4588 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 TRAV8-3A0A0A6YYJ7 113 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 TRBV10-1A0A0K0K1A3 114 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 BCL2L11O43521 198 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 CXCL1P09341 107 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 AKR1C3P42330 323 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 EIF5AP63241 154 aaKnown RBP7.03□□□□□ -1.28
PSMC6-215ENST00000557517 BAGE2Q86Y30 109 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 FAM213BQ8TBF2 198 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 ZNF471Q9BX82 626 aaPredicted RBP7.03□□□□□ -1.28
PSMC6-215ENST00000557517 VPS13BQ7Z7G8 4022 aa7.03□□□□□ -1.28
PSMC6-215ENST00000557517 A0A087WWL8 130 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 TMSB15BA0A087X1C1 80 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 IGLV5-52A0A0A0MRZ9 124 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 TRAV1-1A0A0B4J248 108 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 KANTRA0A1W2PQU2 76 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 M0R381 172 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 DAZ4Q86SG3 579 aaKnown RBP7.02□□□□□ -1.29
PSMC6-215ENST00000557517 NIT1Q86X76 327 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 ZFP82Q8N141 532 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 OR10G8Q8NGN5 311 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 FRZBQ92765 325 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 Q9HAA7 133 aa7.02□□□□□ -1.29
PSMC6-215ENST00000557517 DAZ3Q9NR90 486 aaKnown RBP7.02□□□□□ -1.29
PSMC6-215ENST00000557517 TRBV7-3A0A075B6L6 115 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 SNAI2O43623 268 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 C1QBP02746 253 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 OR5AL1P0C617 328 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 RAB4BP61018 213 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 CCL20P78556 96 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 TOR2AQ5JU69 321 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 LCE5AQ5TCM9 118 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 FAM74A4Q5TZK3 123 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 Q5VSD8 79 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 PRR27Q6MZM9 219 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 TMEM70Q9BUB7 260 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 COX11Q9Y6N1 276 aa7.01□□□□□ -1.29
PSMC6-215ENST00000557517 UBR4Q5T4S7 5183 aa7□□□□□ -1.29
PSMC6-215ENST00000557517 PFDN1O60925 122 aa7□□□□□ -1.29
PSMC6-215ENST00000557517 RAB5CP51148 216 aa7□□□□□ -1.29
PSMC6-215ENST00000557517 UBE2D3P61077 147 aa7□□□□□ -1.29
PSMC6-215ENST00000557517 UBE2D2P62837 147 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms