RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RHODO00212 210 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 EREGO14944 169 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
VSX1-207ENST00000557285 PIK3CD-AS1Q5SR53 167 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 LELP1Q5T871 98 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 UFSP1Q6NVU6 142 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 ZFP82Q8N141 532 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 C10orf126Q8N4M7 172 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 Q9HAA7 133 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 HSPG2P98160 4391 aa11.18□□□□□ -0.62
VSX1-207ENST00000557285 RAB5CP51148 216 aa11.17□□□□□ -0.62
VSX1-207ENST00000557285 SFRP2Q96HF1 295 aa11.17□□□□□ -0.62
VSX1-207ENST00000557285 SCRT2Q9NQ03 307 aa11.17□□□□□ -0.62
VSX1-207ENST00000557285 DNAH5Q8TE73 4624 aa11.16□□□□□ -0.62
VSX1-207ENST00000557285 TEX46H3BTG2 121 aa11.16□□□□□ -0.62
VSX1-207ENST00000557285 C1QBP02746 253 aa11.16□□□□□ -0.62
VSX1-207ENST00000557285 SULT1A2P50226 295 aa11.16□□□□□ -0.62
VSX1-207ENST00000557285 LINC01556Q5JQF7 62 aa11.16□□□□□ -0.62
VSX1-207ENST00000557285 Q6ZNX1 250 aa11.16□□□□□ -0.62
VSX1-207ENST00000557285 Q8N3U1 123 aa11.16□□□□□ -0.62
VSX1-207ENST00000557285 MLST8Q9BVC4 326 aa11.16□□□□□ -0.62
VSX1-207ENST00000557285 K7EP13 123 aa11.15□□□□□ -0.62
VSX1-207ENST00000557285 PSCAO43653 123 aa11.15□□□□□ -0.62
VSX1-207ENST00000557285 CENPWQ5EE01 88 aa11.15□□□□□ -0.62
VSX1-207ENST00000557285 AKAP14Q86UN6 197 aa11.15□□□□□ -0.62
VSX1-207ENST00000557285 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
VSX1-207ENST00000557285 OR10AG1Q8NH19 301 aa11.15□□□□□ -0.62
VSX1-207ENST00000557285 A0A087WTM6 91 aa11.14□□□□□ -0.63
VSX1-207ENST00000557285 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
VSX1-207ENST00000557285 LINC00694P0DN24 101 aa11.14□□□□□ -0.63
VSX1-207ENST00000557285 C11orf52Q96A22 123 aa11.14□□□□□ -0.63
VSX1-207ENST00000557285 RAB19A4D1S5 217 aa11.13□□□□□ -0.63
VSX1-207ENST00000557285 IFNA1P01562 189 aa11.13□□□□□ -0.63
VSX1-207ENST00000557285 ZNF56Q15929 161 aa11.13□□□□□ -0.63
VSX1-207ENST00000557285 SPANXN1Q5VSR9 72 aa11.13□□□□□ -0.63
VSX1-207ENST00000557285 TPPP3Q9BW30 176 aa11.13□□□□□ -0.63
VSX1-207ENST00000557285 APOBP04114 4563 aaKnown RBP11.12□□□□□ -0.63
VSX1-207ENST00000557285 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
VSX1-207ENST00000557285 GZMBP10144 247 aa11.12□□□□□ -0.63
VSX1-207ENST00000557285 MEF2BQ02080 365 aaPredicted RBP11.12□□□□□ -0.63
VSX1-207ENST00000557285 MAPKAPK5-AS1Q8N8E1 139 aa11.12□□□□□ -0.63
VSX1-207ENST00000557285 IBA57-AS1B1ANH7 110 aa11.11□□□□□ -0.63
VSX1-207ENST00000557285 GNG4P50150 75 aa11.11□□□□□ -0.63
VSX1-207ENST00000557285 C9orf62Q8N4C0 152 aa11.11□□□□□ -0.63
VSX1-207ENST00000557285 DAZAP1Q96EP5 407 aaKnown RBP11.11□□□□□ -0.63
VSX1-207ENST00000557285 MED9Q9NWA0 146 aa11.11□□□□□ -0.63
VSX1-207ENST00000557285 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
VSX1-207ENST00000557285 BCL2P10415 239 aa11.1□□□□□ -0.63
VSX1-207ENST00000557285 KRTAP4-5Q9BYR2 181 aa11.1□□□□□ -0.63
VSX1-207ENST00000557285 ABCA13Q86UQ4 5058 aa11.1□□□□□ -0.63
VSX1-207ENST00000557285 A0A087WWC5 75 aa11.09□□□□□ -0.63
VSX1-207ENST00000557285 RBFOX3A6NFN3 312 aa11.09□□□□□ -0.63
VSX1-207ENST00000557285 F5H697 171 aa11.09□□□□□ -0.63
VSX1-207ENST00000557285 PDE6DO43924 150 aa11.09□□□□□ -0.63
VSX1-207ENST00000557285 CXCL1P09341 107 aa11.09□□□□□ -0.63
VSX1-207ENST00000557285 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
VSX1-207ENST00000557285 DAZ4Q86SG3 579 aaKnown RBP11.09□□□□□ -0.63
VSX1-207ENST00000557285 OR2D3Q8NGH3 330 aa11.09□□□□□ -0.63
VSX1-207ENST00000557285 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
VSX1-207ENST00000557285 DAZ3Q9NR90 486 aaKnown RBP11.09□□□□□ -0.63
VSX1-207ENST00000557285 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
VSX1-207ENST00000557285 SNAI2O43623 268 aa11.08□□□□□ -0.64
VSX1-207ENST00000557285 IGLV2-8P01709 118 aa11.08□□□□□ -0.64
VSX1-207ENST00000557285 OR5AL1P0C617 328 aa11.08□□□□□ -0.64
VSX1-207ENST00000557285 RAB4BP61018 213 aa11.08□□□□□ -0.64
VSX1-207ENST00000557285 ALKAL2Q6UX46 152 aa11.08□□□□□ -0.64
VSX1-207ENST00000557285 VAX2Q9UIW0 290 aa11.08□□□□□ -0.64
VSX1-207ENST00000557285 URGCP-MRPS24S4R325 110 aa11.08□□□□□ -0.64
VSX1-207ENST00000557285 TRBV7-3A0A075B6L6 115 aa11.07□□□□□ -0.64
VSX1-207ENST00000557285 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
VSX1-207ENST00000557285 SMIM17P0DL12 118 aa11.07□□□□□ -0.64
VSX1-207ENST00000557285 CDPF1Q6NVV7 123 aa11.07□□□□□ -0.64
VSX1-207ENST00000557285 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
VSX1-207ENST00000557285 P01737 135 aa11.06□□□□□ -0.64
VSX1-207ENST00000557285 MGPP08493 103 aa11.06□□□□□ -0.64
VSX1-207ENST00000557285 UBE2D3P61077 147 aa11.06□□□□□ -0.64
VSX1-207ENST00000557285 UBE2D2P62837 147 aa11.06□□□□□ -0.64
VSX1-207ENST00000557285 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
VSX1-207ENST00000557285 SSBP4Q9BWG4 385 aaPredicted RBP11.06□□□□□ -0.64
VSX1-207ENST00000557285 LRCOL1A6NCL2 159 aa11.05□□□□□ -0.64
VSX1-207ENST00000557285 NKX2-5P52952 324 aaPredicted RBP11.05□□□□□ -0.64
VSX1-207ENST00000557285 KRTAP10-1P60331 282 aa11.05□□□□□ -0.64
VSX1-207ENST00000557285 RPS20P60866 119 aaKnown RBP11.05□□□□□ -0.64
VSX1-207ENST00000557285 LAGE3Q14657 143 aa11.05□□□□□ -0.64
VSX1-207ENST00000557285 NEXN-AS1Q8NBZ9 246 aa11.05□□□□□ -0.64
VSX1-207ENST00000557285 AP1S3Q96PC3 154 aa11.05□□□□□ -0.64
VSX1-207ENST00000557285 A0A087WX48 190 aa11.04□□□□□ -0.64
VSX1-207ENST00000557285 C19orf71A6NCJ1 209 aa11.04□□□□□ -0.64
VSX1-207ENST00000557285 LECT2O14960 151 aa11.04□□□□□ -0.64
VSX1-207ENST00000557285 KCNIP4Q6PIL6 250 aa11.04□□□□□ -0.64
VSX1-207ENST00000557285 NIT1Q86X76 327 aa11.04□□□□□ -0.64
VSX1-207ENST00000557285 DNAJC30Q96LL9 226 aa11.04□□□□□ -0.64
VSX1-207ENST00000557285 KLK12Q9UKR0 248 aa11.04□□□□□ -0.64
VSX1-207ENST00000557285 IGLV5-52A0A0A0MRZ9 124 aa11.03□□□□□ -0.64
VSX1-207ENST00000557285 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
VSX1-207ENST00000557285 TMEM262E9PQX1 116 aa11.03□□□□□ -0.64
VSX1-207ENST00000557285 TM2D2Q9BX73 214 aa11.03□□□□□ -0.64
VSX1-207ENST00000557285 A0A1B0GVG6 124 aa11.02□□□□□ -0.65
VSX1-207ENST00000557285 XKRY2A2RUG3 117 aa11.02□□□□□ -0.65
VSX1-207ENST00000557285 IGLC6P0CF74 106 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms