RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 IGKV2D-40P01614 121 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-223ENST00000557076 TCRBP04435 133 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 AQP4P55087 323 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 GABARAPL2P60520 117 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 COX6A2Q02221 97 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 SLC38A11Q08AI6 406 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 MAJINQ3KP22 176 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 IZUMO2Q6UXV1 221 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 OR1L4Q8NGR5 311 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 DYNC2LI1Q8TCX1 351 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 SMIM8Q96KF7 97 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 KCNS1Q96KK3 526 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 PRR34Q9NV39 138 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 PSENENQ9NZ42 101 aa2.85□□□□□ -1.95
SCFD1-223ENST00000557076 TRAV21A0A0B4J279 112 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 C5orf51A6NDU8 294 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 H3BP45 60 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 HLA-DQA1P01909 254 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 NBEAP1P0C6P0 100 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 RRAS2P62070 204 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-223ENST00000557076 CACNG7P62955 275 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 TMEM14EPQ6UXP3 125 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 STPG4Q8N801 248 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 C15orf54Q8N8G6 183 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 OR10G7Q8NGN6 311 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 OR2T35Q8NGX2 323 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 LYPD6BQ8NI32 183 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 PFDN5Q99471 154 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 MGST2Q99735 147 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 SAMD10Q9BYL1 202 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 C20orf85Q9H1P6 137 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 GPN1Q9HCN4 374 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-223ENST00000557076 CCDC59Q9P031 241 aaKnown RBP2.84□□□□□ -1.95
SCFD1-223ENST00000557076 LINC00474Q9P2X8 69 aa2.84□□□□□ -1.95
SCFD1-223ENST00000557076 IGLV9-49A0A0B4J1Y8 123 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 MUC21A0A0G2JKD1 596 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 A8MWV9 139 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 HPGDSO60760 199 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 NDUFS6O75380 124 aaKnown RBP2.83□□□□□ -1.96
SCFD1-223ENST00000557076 TSHBP01222 138 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 CRPP02741 224 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 ANGP03950 147 aaKnown RBP2.83□□□□□ -1.96
SCFD1-223ENST00000557076 TYMSP04818 313 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 AKAIN1P0CW23 69 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 GZMBP10144 247 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 TGFBR1P36897 503 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 CSN1S1P47710 185 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 RPL29P47914 159 aaKnown RBP2.83□□□□□ -1.96
SCFD1-223ENST00000557076 CAMLGP49069 296 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 LINC01547P58512 204 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-223ENST00000557076 TAS2R30P59541 319 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 PKIAP61925 76 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 TMEM128Q5BJH2 165 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 ZNF506Q5JVG8 444 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 UFSP1Q6NVU6 142 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 FAAP20Q6NZ36 180 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 C14orf178Q8N769 122 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-223ENST00000557076 OR2G3Q8NGZ4 309 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 ASB13Q8WXK3 278 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 CNBD2Q96M20 576 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 C9orf85Q96MD7 179 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 PARLQ9H300 379 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 NAGKQ9UJ70 344 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 SCP2D1Q9UJQ7 156 aa2.83□□□□□ -1.96
SCFD1-223ENST00000557076 IGLV10-54A0A075B6I4 117 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 IGLV1-50A0A075B6I6 118 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 TRBV6-8A0A0A6YYG3 113 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 TRAV8-4A0A0B4J246 113 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 TRBV10-1A0A0K0K1A3 114 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 FAM25AB3EWG3 89 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 FAM25CB3EWG5 89 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 FAM25GB3EWG6 89 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 L7N2F9 121 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 P01737 135 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 S100A6P06703 90 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 METTL15P1P0C7V9 234 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 PYYP10082 97 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 RPS10P46783 165 aaKnown RBP2.82□□□□□ -1.96
SCFD1-223ENST00000557076 CAV2P51636 162 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 CTAG1AP78358 180 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 GAGE6Q13070 117 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 MIC13Q5XKP0 118 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 CLVS1Q8IUQ0 354 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-223ENST00000557076 LITAFQ99732 161 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 SOSTQ9BQB4 213 aa2.82□□□□□ -1.96
SCFD1-223ENST00000557076 CHTOPQ9Y3Y2 248 aaKnown RBP2.82□□□□□ -1.96
SCFD1-223ENST00000557076 TRBV7-3A0A075B6L6 115 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 TRAV6A0A075B6T7 132 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 IGKV2-24A0A0C4DH68 120 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 RNASE3P12724 160 aaKnown RBP2.81□□□□□ -1.96
SCFD1-223ENST00000557076 MRPS10P82664 201 aaKnown RBP2.81□□□□□ -1.96
SCFD1-223ENST00000557076 MPV17L2Q567V2 206 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 ZC2HC1BQ5TFG8 222 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 LINC00269Q8N2A0 174 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 FER1L6-AS1Q8NA97 138 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 INO80EQ8NBZ0 244 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-223ENST00000557076 DIRC1Q969H9 104 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 FAM167A-AS1Q96KT0 104 aa2.81□□□□□ -1.96
SCFD1-223ENST00000557076 TRAV1-1A0A0B4J248 108 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms