RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 CNFNQ9BYD5 112 aa6.92□□□□□ -1.3
TMEM260-213ENST00000556929 TRAV9-1A0A075B6T8 112 aa6.91□□□□□ -1.3
TMEM260-213ENST00000556929 A0A1B0GW15 77 aa6.91□□□□□ -1.3
TMEM260-213ENST00000556929 RS1O15537 224 aa6.91□□□□□ -1.3
TMEM260-213ENST00000556929 S100A8P05109 93 aa6.91□□□□□ -1.3
TMEM260-213ENST00000556929 NANOS2P60321 138 aaKnown RBP6.91□□□□□ -1.3
TMEM260-213ENST00000556929 BTF3L4Q96K17 158 aa6.91□□□□□ -1.3
TMEM260-213ENST00000556929 FBN3Q75N90 2809 aa6.91□□□□□ -1.3
TMEM260-213ENST00000556929 COL7A1Q02388 2944 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 NACAE9PAV3 2078 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 TRAV10A0A0B4J240 114 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 RHODO00212 210 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 CFAP126Q5VTH2 177 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 MRPL54Q6P161 138 aaKnown RBP6.9□□□□□ -1.3
TMEM260-213ENST00000556929 ATRAIDQ6UW56 229 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 ZFP2Q6ZN57 461 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 Q6ZTC4 211 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 ATP5L2Q7Z4Y8 100 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 MSRB1Q9NZV6 116 aa6.9□□□□□ -1.3
TMEM260-213ENST00000556929 TRGV4A0A0C4DH28 118 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 IGHV3-53P01767 116 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 CAMPP49913 170 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 HBBP68871 147 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 SLAQ13239 276 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 FAM74A4Q5TZK3 123 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 Q8N3U1 123 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 C14orf178Q8N769 122 aaPredicted RBP6.89□□□□□ -1.31
TMEM260-213ENST00000556929 ZNF479Q96JC4 524 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 JPT2Q9H910 190 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 SMCO4Q9NRQ5 59 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 URGCP-MRPS24S4R325 110 aa6.89□□□□□ -1.31
TMEM260-213ENST00000556929 A0A087WWL8 130 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 F5H768 121 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 HTN3P15516 51 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 ZNF56Q15929 161 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 RASL11AQ6T310 242 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 POM121L12Q8N7R1 296 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 WWC2-AS2Q96NR7 200 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 TMEM191AQ9H0A3 160 aa6.88□□□□□ -1.31
TMEM260-213ENST00000556929 TENM3Q9P273 2699 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 IGHV3-73A0A0B4J1V6 119 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 A0A1B0GXF2 115 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 F5H697 171 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 CRYGDP07320 174 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 MGPP08493 103 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 EVI2AP22794 236 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 RAB4BP61018 213 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 FHL2Q14192 279 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 ELOBQ15370 118 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 COX19Q49B96 90 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
TMEM260-213ENST00000556929 SAMD10Q9BYL1 202 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 HHLA3Q9XRX5 114 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 KIF25-AS1Q9Y6Z4 181 aa6.87□□□□□ -1.31
TMEM260-213ENST00000556929 TRBV24-1A0A075B6N3 115 aa6.86□□□□□ -1.31
TMEM260-213ENST00000556929 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
TMEM260-213ENST00000556929 HOXA5P20719 270 aa6.86□□□□□ -1.31
TMEM260-213ENST00000556929 TMEM88Q6PEY1 159 aa6.86□□□□□ -1.31
TMEM260-213ENST00000556929 GATD1Q8NB37 220 aa6.86□□□□□ -1.31
TMEM260-213ENST00000556929 FRZBQ92765 325 aa6.86□□□□□ -1.31
TMEM260-213ENST00000556929 PRO0255Q9UI72 69 aa6.86□□□□□ -1.31
TMEM260-213ENST00000556929 TGIF2-C20orf24A0A0A6YYL0 155 aa6.85□□□□□ -1.31
TMEM260-213ENST00000556929 NUPR2A6NF83 97 aa6.85□□□□□ -1.31
TMEM260-213ENST00000556929 H7C1H1 209 aa6.85□□□□□ -1.31
TMEM260-213ENST00000556929 GATA1P15976 413 aaPredicted RBP6.85□□□□□ -1.31
TMEM260-213ENST00000556929 CRYBA4P53673 196 aa6.85□□□□□ -1.31
TMEM260-213ENST00000556929 RHOHQ15669 191 aa6.85□□□□□ -1.31
TMEM260-213ENST00000556929 UFSP1Q6NVU6 142 aa6.85□□□□□ -1.31
TMEM260-213ENST00000556929 CBLN2Q8IUK8 224 aa6.85□□□□□ -1.31
TMEM260-213ENST00000556929 K7EQD1 137 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 PAX4O43316 350 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 MT-ND6P03923 174 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 RAB4AP20338 218 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 LINC00315P59091 139 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 FAM104BQ5XKR9 115 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 AMN1Q8IY45 258 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 SLC25A29Q8N8R3 303 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 FAM210BQ96KR6 192 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 PRADC1Q9BSG0 188 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 GNB1LQ9BYB4 327 aa6.84□□□□□ -1.31
TMEM260-213ENST00000556929 KLK5Q9Y337 293 aaPredicted RBP6.84□□□□□ -1.31
TMEM260-213ENST00000556929 TRAV26-1A0A087WT03 109 aa6.83□□□□□ -1.32
TMEM260-213ENST00000556929 A0A0J9YY99 117 aa6.83□□□□□ -1.32
TMEM260-213ENST00000556929 H3BNG1 76 aa6.83□□□□□ -1.32
TMEM260-213ENST00000556929 SCO1O75880 301 aa6.83□□□□□ -1.32
TMEM260-213ENST00000556929 HLA-DQA1P01909 254 aa6.83□□□□□ -1.32
TMEM260-213ENST00000556929 SUMO4Q6EEV6 95 aa6.83□□□□□ -1.32
TMEM260-213ENST00000556929 CEMP1Q6PRD7 247 aaPredicted RBP6.83□□□□□ -1.32
TMEM260-213ENST00000556929 MUC7Q8TAX7 377 aa6.83□□□□□ -1.32
TMEM260-213ENST00000556929 MRAP2Q96G30 205 aa6.83□□□□□ -1.32
TMEM260-213ENST00000556929 TRBV10-1A0A0K0K1A3 114 aa6.82□□□□□ -1.32
TMEM260-213ENST00000556929 IGLL5B9A064 214 aa6.82□□□□□ -1.32
TMEM260-213ENST00000556929 CKS2P33552 79 aa6.82□□□□□ -1.32
TMEM260-213ENST00000556929 MRPL51Q4U2R6 128 aaKnown RBP6.82□□□□□ -1.32
TMEM260-213ENST00000556929 TMEM136Q6ZRR5 245 aa6.82□□□□□ -1.32
TMEM260-213ENST00000556929 Q6ZSN1 163 aa6.82□□□□□ -1.32
TMEM260-213ENST00000556929 C15orf53Q8NAA6 179 aa6.82□□□□□ -1.32
TMEM260-213ENST00000556929 RNF185Q96GF1 192 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms