RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 CCKP06307 115 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 CCL4P13236 92 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 PEBP1P30086 187 aaKnown RBP1.92□□□□□ -2.1
GPHN-214ENST00000556633 MP68P56378 58 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 LINC00313P59037 77 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 CCL20P78556 96 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 MIC13Q5XKP0 118 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 FAM19A3Q7Z5A8 133 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 Q8N8P6 123 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 DIRC1Q969H9 104 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 CHCHD1Q96BP2 118 aaKnown RBP1.92□□□□□ -2.1
GPHN-214ENST00000556633 CYSTM1Q9H1C7 97 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 PDCD11Q14690 1871 aaKnown RBP1.92□□□□□ -2.1
GPHN-214ENST00000556633 PLXNA4Q9HCM2 1894 aa1.92□□□□□ -2.1
GPHN-214ENST00000556633 LRRC37A3O60309 1634 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 PAPPAQ13219 1627 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 COL5A3P25940 1745 aaPredicted RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 DOCK2Q92608 1830 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 NUP210Q8TEM1 1887 aaPredicted RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 COL1A1P02452 1464 aaPredicted RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 IGHV3OR15-7A0A075B7D8 119 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 IGKV1D-43A0A0B4J1Z2 117 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 LOC389332A0A1B0GUA5 103 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 TCRBV4S1A1TA0A5B7 111 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 C19orf71A6NCJ1 209 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 J3QRE1 110 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 TMEM256-PLSCR3K7ERE1 68 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 NDUFC1O43677 76 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 NPYP01303 97 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 PRH1P02810 166 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 RPL30P62888 115 aaKnown RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 ZNF791Q3KP31 576 aaPredicted RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 ASB16-AS1Q495Z4 193 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 LINC00596Q86U02 117 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 ZNF563Q8TA94 476 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 ITLN2Q8WWU7 325 aaPredicted RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 RNASE6Q93091 150 aaKnown RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 FXYD5Q96DB9 178 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 NXT2Q9NPJ8 142 aaKnown RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 IL36BQ9NZH7 164 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 TP73-AS1Q9UF72 201 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 CCDC88CQ9P219 2028 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 PLXNB3Q9ULL4 1909 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 WDR90Q96KV7 1748 aa1.91□□□□□ -2.1
GPHN-214ENST00000556633 PARP4Q9UKK3 1724 aaKnown RBP1.91□□□□□ -2.1
GPHN-214ENST00000556633 NLRC5Q86WI3 1866 aa1.9□□□□□ -2.1
GPHN-214ENST00000556633 ARFGEF2Q9Y6D5 1785 aa1.9□□□□□ -2.1
GPHN-214ENST00000556633 BTAF1O14981 1849 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 IGKV2-24A0A0C4DH68 120 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 MYMXA0A1B0GTQ4 84 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 H7BZZ5 65 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 COX7A2LO14548 114 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 TIMM17BO60830 172 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 IGKV1-5P01602 117 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 SLC25A16P16260 332 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 GCHFRP30047 84 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 FXYD2P54710 66 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 KLKP1Q107X0 134 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 Q1T7F1 81 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 LYPD5Q6UWN5 251 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 C7orf65Q6ZTY9 151 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 C6orf201Q7Z4U5 140 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 NDUFA11Q86Y39 141 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 IFI27L1Q96BM0 104 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 ABHD14BQ96IU4 210 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 SMIM7Q9BQ49 75 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 TXNDC17Q9BRA2 123 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 FAM103A1Q9BTL3 118 aaKnown RBP1.9□□□□□ -2.11
GPHN-214ENST00000556633 HILPDAQ9Y5L2 63 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 ARL2-SNX15V9GYD0 113 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 LY75O60449 1722 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 DOT1LQ8TEK3 1739 aa1.9□□□□□ -2.11
GPHN-214ENST00000556633 GOLGB1Q14789 3259 aaKnown RBP1.89□□□□□ -2.11
GPHN-214ENST00000556633 TRPM7Q96QT4 1865 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 IGKV1-9A0A0C4DH69 117 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 A0A1B0GW54 56 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 A0A1W2PQD3 144 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 A6NN06 94 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 BUB1B-PAK6H3BSN5 160 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 RNASE4P34096 147 aaKnown RBP1.89□□□□□ -2.11
GPHN-214ENST00000556633 UBE2D1P51668 147 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 DYNLT3P51808 116 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 PCBD1P61457 104 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 UBE2BP63146 152 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 SERF2P84101 59 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 ZNF117Q03924 483 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 RPL18Q07020 188 aaKnown RBP1.89□□□□□ -2.11
GPHN-214ENST00000556633 INSL4Q14641 139 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 SS18Q15532 418 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 LINC01554Q52M75 96 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 ATP11AUNQ6ZP68 121 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 GPHB5Q86YW7 130 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 C11orf1Q9H5F2 150 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 MRPL35Q9NZE8 188 aaKnown RBP1.89□□□□□ -2.11
GPHN-214ENST00000556633 TAC3Q9UHF0 121 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 RGPD3A6NKT7 1758 aaPredicted RBP1.89□□□□□ -2.11
GPHN-214ENST00000556633 COL14A1Q05707 1796 aaKnown RBP1.89□□□□□ -2.11
GPHN-214ENST00000556633 RGPD4Q7Z3J3 1758 aa1.89□□□□□ -2.11
GPHN-214ENST00000556633 NCKAP5O14513 1909 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms