RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 KIF25-AS1Q9Y6Z4 181 aa7.97□□□□□ -1.13
FOXN3-212ENST00000556541 TRBV24-1A0A075B6N3 115 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 TRAV10A0A0B4J240 114 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 CRYGDP07320 174 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 DEFB130BP0DP73 79 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 DEFB130AP0DP74 79 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 HBBP68871 147 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 SMIM15Q7Z3B0 74 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 OR4C5Q8NGB2 326 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 TPPP3Q9BW30 176 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 DPH3P1Q9H4G8 78 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 SMCO4Q9NRQ5 59 aa7.96□□□□□ -1.14
FOXN3-212ENST00000556541 TRBV6-4A0A1B0GX49 114 aa7.95□□□□□ -1.14
FOXN3-212ENST00000556541 LINC00315P59091 139 aa7.95□□□□□ -1.14
FOXN3-212ENST00000556541 TWIST1Q15672 202 aa7.95□□□□□ -1.14
FOXN3-212ENST00000556541 ATRAIDQ6UW56 229 aa7.95□□□□□ -1.14
FOXN3-212ENST00000556541 WWC2-AS2Q96NR7 200 aa7.95□□□□□ -1.14
FOXN3-212ENST00000556541 YPEL4Q96NS1 127 aa7.95□□□□□ -1.14
FOXN3-212ENST00000556541 IGHV3-53P01767 116 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 SMIM17P0DL12 118 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 GATA1P15976 413 aaPredicted RBP7.94□□□□□ -1.14
FOXN3-212ENST00000556541 FAM3BP58499 235 aaPredicted RBP7.94□□□□□ -1.14
FOXN3-212ENST00000556541 NANOS2P60321 138 aaKnown RBP7.94□□□□□ -1.14
FOXN3-212ENST00000556541 RAB4BP61018 213 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 FHL2Q14192 279 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 ELOBQ15370 118 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
FOXN3-212ENST00000556541 Q6ZTC4 211 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 ZNF479Q96JC4 524 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 MSRB1Q9NZV6 116 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 PRO0255Q9UI72 69 aa7.94□□□□□ -1.14
FOXN3-212ENST00000556541 TRBV10-1A0A0K0K1A3 114 aa7.93□□□□□ -1.14
FOXN3-212ENST00000556541 EVI2AP22794 236 aa7.93□□□□□ -1.14
FOXN3-212ENST00000556541 TCTAP57738 103 aa7.93□□□□□ -1.14
FOXN3-212ENST00000556541 DEFB131BA0A096LNP1 70 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 MUC21A0A0G2JKD1 596 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 MUC21A0A140T8X8 626 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 NUPR2A6NF83 97 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 MT-ND6P03923 174 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 FAM104BQ5XKR9 115 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 C14orf178Q8N769 122 aaPredicted RBP7.92□□□□□ -1.14
FOXN3-212ENST00000556541 GNB1LQ9BYB4 327 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 SAMD10Q9BYL1 202 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 JPT2Q9H910 190 aa7.92□□□□□ -1.14
FOXN3-212ENST00000556541 TRGV4A0A0C4DH28 118 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 H7C1H1 209 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 HLA-DQA1P01909 254 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 HOXA5P20719 270 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 CRYBA4P53673 196 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 RHOHQ15669 191 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 MRPL54Q6P161 138 aaKnown RBP7.91□□□□□ -1.14
FOXN3-212ENST00000556541 PHLDA1Q8WV24 401 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-212ENST00000556541 MRAP2Q96G30 205 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 DNAH7Q8WXX0 4024 aa7.91□□□□□ -1.14
FOXN3-212ENST00000556541 A0A087WWL8 130 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 K7EQD1 137 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 PPP1R17O96001 155 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 PPBPP02775 128 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 RAB4AP20338 218 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 CEMP1Q6PRD7 247 aaPredicted RBP7.9□□□□□ -1.14
FOXN3-212ENST00000556541 TMEM136Q6ZRR5 245 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 SH2D6Q7Z4S9 175 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 C15orf53Q8NAA6 179 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 MUC7Q8TAX7 377 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 RNF185Q96GF1 192 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 DNAJC30Q96LL9 226 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 PRADC1Q9BSG0 188 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 URGCP-MRPS24S4R325 110 aa7.9□□□□□ -1.14
FOXN3-212ENST00000556541 TRAV26-1A0A087WT03 109 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 F5H768 121 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 C3orf84H3BNL1 204 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 M0QY20 66 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 LINC00694P0DN24 101 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 CAMPP49913 170 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 FAM74A4Q5TZK3 123 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 SLC25A29Q8N8R3 303 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 VSIG2Q96IQ7 327 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 LAMTOR2Q9Y2Q5 125 aa7.89□□□□□ -1.15
FOXN3-212ENST00000556541 KLK5Q9Y337 293 aaPredicted RBP7.89□□□□□ -1.15
FOXN3-212ENST00000556541 TRBV6-5A0A0K0K1A5 114 aa7.88□□□□□ -1.15
FOXN3-212ENST00000556541 PHOX2AO14813 284 aa7.88□□□□□ -1.15
FOXN3-212ENST00000556541 PAX4O43316 350 aa7.88□□□□□ -1.15
FOXN3-212ENST00000556541 ZNF56Q15929 161 aa7.88□□□□□ -1.15
FOXN3-212ENST00000556541 SUMO4Q6EEV6 95 aa7.88□□□□□ -1.15
FOXN3-212ENST00000556541 TMEM88Q6PEY1 159 aa7.88□□□□□ -1.15
FOXN3-212ENST00000556541 CBLN2Q8IUK8 224 aa7.88□□□□□ -1.15
FOXN3-212ENST00000556541 TGIF2-C20orf24A0A0A6YYL0 155 aa7.87□□□□□ -1.15
FOXN3-212ENST00000556541 MGPP08493 103 aa7.87□□□□□ -1.15
FOXN3-212ENST00000556541 TIRAPP58753 221 aa7.87□□□□□ -1.15
FOXN3-212ENST00000556541 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
FOXN3-212ENST00000556541 MRPL23Q16540 153 aaKnown RBP7.87□□□□□ -1.15
FOXN3-212ENST00000556541 Q6ZSN1 163 aa7.87□□□□□ -1.15
FOXN3-212ENST00000556541 AMN1Q8IY45 258 aa7.87□□□□□ -1.15
FOXN3-212ENST00000556541 NIT2Q9NQR4 276 aa7.87□□□□□ -1.15
FOXN3-212ENST00000556541 COLCA2A8K830 154 aa7.86□□□□□ -1.15
FOXN3-212ENST00000556541 F5H697 171 aa7.86□□□□□ -1.15
FOXN3-212ENST00000556541 SSTP61278 116 aa7.86□□□□□ -1.15
FOXN3-212ENST00000556541 RPL36AP83881 106 aaKnown RBP7.86□□□□□ -1.15
FOXN3-212ENST00000556541 MRPL51Q4U2R6 128 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms