RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 B4DEV8 164 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 RS1O15537 224 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 ZNF253O75346 499 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 NDUFB4O95168 129 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 IGKV2D-40P01614 121 aaPredicted RBP4.65□□□□□ -1.67
PSEN1-216ENST00000556066 SLC25A5P05141 298 aaKnown RBP4.65□□□□□ -1.67
PSEN1-216ENST00000556066 GPX1P07203 203 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H1EP10412 219 aaKnown RBP4.65□□□□□ -1.67
PSEN1-216ENST00000556066 PNRC1Q12796 327 aaPredicted RBP4.65□□□□□ -1.67
PSEN1-216ENST00000556066 LINC00612Q8N6U2 182 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 ZNF503Q96F45 646 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 LINC00477Q96M19 166 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 SLC25A2Q9BXI2 301 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 AGPAT4-IT1Q9H0P7 198 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 Q9H8V8 135 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 TMEM14CQ9P0S9 112 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 URGCP-MRPS24S4R325 110 aa4.65□□□□□ -1.67
PSEN1-216ENST00000556066 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.67
PSEN1-216ENST00000556066 F6UZH7 168 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 OR10J4P0C629 311 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 NBEAP1P0C6P0 100 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 RPS10P46783 165 aaKnown RBP4.64□□□□□ -1.67
PSEN1-216ENST00000556066 RAB4BP61018 213 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 RAB5BP61020 215 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 DAZ2Q13117 558 aaKnown RBP4.64□□□□□ -1.67
PSEN1-216ENST00000556066 PDE6HQ13956 83 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 ESRGQ1W209 222 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 TMEM78Q5T7P6 136 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 MRPL53Q96EL3 112 aaKnown RBP4.64□□□□□ -1.67
PSEN1-216ENST00000556066 VGLL1Q99990 258 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 DERL1Q9BUN8 251 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 OR51M1Q9H341 326 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 BIN3Q9NQY0 253 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 KLF12Q9Y4X4 402 aa4.64□□□□□ -1.67
PSEN1-216ENST00000556066 CSDC2Q9Y534 153 aaKnown RBP4.64□□□□□ -1.67
PSEN1-216ENST00000556066 KLLNB2CW77 178 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 PDE6DO43924 150 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 OR7C2O60412 319 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 ZNF324O75467 553 aaPredicted RBP4.63□□□□□ -1.67
PSEN1-216ENST00000556066 IGHV3-53P01767 116 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 PFN1P07737 140 aaKnown RBP4.63□□□□□ -1.67
PSEN1-216ENST00000556066 SNRPEP62304 92 aaKnown RBP4.63□□□□□ -1.67
PSEN1-216ENST00000556066 C5orf47Q569G3 176 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 TTC32Q5I0X7 151 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 Q6ZQT7 251 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 C9orf47Q6ZRZ4 202 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 C11orf72Q8NBR9 251 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 Q8TAT8 98 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 FAM167A-AS1Q96KT0 104 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 SGK494Q96LW2 274 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 TXNDC17Q9BRA2 123 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 PAXXQ9BUH6 204 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 TMEM167BQ9NRX6 74 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 TMEM242Q9NWH2 141 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 TP53TG3Q9ULZ0 132 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 LRP1BQ9NZR2 4599 aa4.63□□□□□ -1.67
PSEN1-216ENST00000556066 IGHV1OR15-1A0A075B7D0 117 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 A0A096LPF7 62 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 H3BNG1 76 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 CRISP2P16562 243 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 RPL35P42766 123 aaKnown RBP4.62□□□□□ -1.67
PSEN1-216ENST00000556066 CSN1S1P47710 185 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 ZNF138P52744 262 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 TCL1AP56279 114 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 RANP62826 216 aaKnown RBP4.62□□□□□ -1.67
PSEN1-216ENST00000556066 ANXA2RQ3ZCQ2 193 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 PRR9Q5T870 116 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 KCNIP4Q6PIL6 250 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 PQLC2Q6ZP29 291 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 SPATA12Q7Z6I5 190 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 LINC01551Q86U37 167 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 ZFAND2AQ8N6M9 145 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 FXYD5Q96DB9 178 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 VSIG2Q96IQ7 327 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 FAM19A4Q96LR4 140 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 MRPL32Q9BYC8 188 aaKnown RBP4.62□□□□□ -1.67
PSEN1-216ENST00000556066 KRTAP1-5Q9BYS1 174 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 Q9H3A6 140 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 MRPL16Q9NX20 251 aaKnown RBP4.62□□□□□ -1.67
PSEN1-216ENST00000556066 ZNF492Q9P255 531 aa4.62□□□□□ -1.67
PSEN1-216ENST00000556066 MRPS16Q9Y3D3 137 aaKnown RBP4.62□□□□□ -1.67
PSEN1-216ENST00000556066 TRBV20OR9-2A0A075B6H5 130 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 A0A1B0GW15 77 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 SPINK4O60575 86 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 TAS2R45P59539 299 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 HERV-K104P63124 156 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 UBE2L3P68036 154 aaKnown RBP4.61□□□□□ -1.67
PSEN1-216ENST00000556066 ZNF415Q09FC8 603 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 MUC21Q5SSG8 566 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 IBA57Q5T440 356 aaKnown RBP4.61□□□□□ -1.67
PSEN1-216ENST00000556066 C11orf52Q96A22 123 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 LINC00467Q9BRT7 94 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 UPK3BQ9BT76 320 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 ICOSQ9Y6W8 199 aa4.61□□□□□ -1.67
PSEN1-216ENST00000556066 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 TRBV24-1A0A075B6N3 115 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 TRGV4A0A0C4DH28 118 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 A0A1W2PRE2 83 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 GGTLC3B5MD39 225 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms