RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
CHMP4BP1-201ENST00000556017 DAZAP1Q96EP5 407 aaKnown RBP9.29□□□□□ -0.92
CHMP4BP1-201ENST00000556017 SFRP2Q96HF1 295 aa9.29□□□□□ -0.92
CHMP4BP1-201ENST00000556017 A0A087WWL8 130 aa9.28□□□□□ -0.92
CHMP4BP1-201ENST00000556017 GRIFINA4D1Z8 144 aa9.28□□□□□ -0.92
CHMP4BP1-201ENST00000556017 B4DEV8 164 aa9.28□□□□□ -0.92
CHMP4BP1-201ENST00000556017 UBE2D3P61077 147 aa9.28□□□□□ -0.92
CHMP4BP1-201ENST00000556017 UBE2D2P62837 147 aa9.28□□□□□ -0.92
CHMP4BP1-201ENST00000556017 SERF2P84101 59 aa9.28□□□□□ -0.92
CHMP4BP1-201ENST00000556017 TNFSF18Q9UNG2 199 aa9.28□□□□□ -0.92
CHMP4BP1-201ENST00000556017 M0R036 132 aa9.27□□□□□ -0.93
CHMP4BP1-201ENST00000556017 RHODO00212 210 aa9.27□□□□□ -0.93
CHMP4BP1-201ENST00000556017 PEX7O00628 323 aa9.27□□□□□ -0.93
CHMP4BP1-201ENST00000556017 SH2D1AO60880 128 aa9.27□□□□□ -0.93
CHMP4BP1-201ENST00000556017 RMI2Q96E14 147 aa9.27□□□□□ -0.93
CHMP4BP1-201ENST00000556017 CHCHD7Q9BUK0 85 aa9.27□□□□□ -0.93
CHMP4BP1-201ENST00000556017 A6NHS1 94 aa9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 FAM74A7A6NL05 159 aa9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 PANO1I0J062 215 aa9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 MBP02144 154 aa9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 KRTAP26-1Q6PEX3 210 aa9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 ACTR3CQ9C0K3 210 aaPredicted RBP9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 ALG5Q9Y673 324 aa9.26□□□□□ -0.93
CHMP4BP1-201ENST00000556017 TNXBP22105 4242 aa9.25□□□□□ -0.93
CHMP4BP1-201ENST00000556017 UBE2G2P60604 165 aa9.25□□□□□ -0.93
CHMP4BP1-201ENST00000556017 ZNF674Q2M3X9 581 aa9.25□□□□□ -0.93
CHMP4BP1-201ENST00000556017 RPL7L1Q6DKI1 246 aaKnown RBP9.25□□□□□ -0.93
CHMP4BP1-201ENST00000556017 OR11H4Q8NGC9 324 aa9.25□□□□□ -0.93
CHMP4BP1-201ENST00000556017 OR10G8Q8NGN5 311 aa9.25□□□□□ -0.93
CHMP4BP1-201ENST00000556017 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
CHMP4BP1-201ENST00000556017 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
CHMP4BP1-201ENST00000556017 TRBV10-1A0A0K0K1A3 114 aa9.24□□□□□ -0.93
CHMP4BP1-201ENST00000556017 LINC01559Q495D7 138 aa9.24□□□□□ -0.93
CHMP4BP1-201ENST00000556017 MPV17L2Q567V2 206 aa9.24□□□□□ -0.93
CHMP4BP1-201ENST00000556017 PRR27Q6MZM9 219 aa9.24□□□□□ -0.93
CHMP4BP1-201ENST00000556017 SYT8Q8NBV8 401 aa9.24□□□□□ -0.93
CHMP4BP1-201ENST00000556017 PLA2G2DQ9UNK4 145 aa9.24□□□□□ -0.93
CHMP4BP1-201ENST00000556017 A0A087WX48 190 aa9.23□□□□□ -0.93
CHMP4BP1-201ENST00000556017 TRBV6-8A0A0A6YYG3 113 aa9.23□□□□□ -0.93
CHMP4BP1-201ENST00000556017 CTXND1A0A1B0GTU2 59 aa9.23□□□□□ -0.93
CHMP4BP1-201ENST00000556017 M0R381 172 aa9.23□□□□□ -0.93
CHMP4BP1-201ENST00000556017 IFNA7P01567 189 aa9.23□□□□□ -0.93
CHMP4BP1-201ENST00000556017 PRSS1P07477 247 aa9.23□□□□□ -0.93
CHMP4BP1-201ENST00000556017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.23□□□□□ -0.93
CHMP4BP1-201ENST00000556017 TMSB15BA0A087X1C1 80 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 USP17L23D6RBM5 183 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 SEC11BP0C7V7 166 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 ELOBQ15370 118 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 FAM162BQ5T6X4 162 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 NTM-AS1Q6ZSK4 140 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 NEXN-AS1Q8NBZ9 246 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 HIST1H2BAQ96A08 127 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 ZFP30Q9Y2G7 519 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
CHMP4BP1-201ENST00000556017 TRBV6-1A0A0K0K1D8 114 aa9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 LTAP01374 205 aa9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 DEFA1P59665 94 aa9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 DEFA3P59666 94 aa9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 RPL37AP61513 92 aaKnown RBP9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 RPL36AP83881 106 aaKnown RBP9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 Q0VG73 95 aa9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 C9orf163Q8N9P6 203 aa9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 RPL36ALQ969Q0 106 aaKnown RBP9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 C1orf43Q9BWL3 253 aa9.21□□□□□ -0.94
CHMP4BP1-201ENST00000556017 G3V3Q6 166 aa9.2□□□□□ -0.94
CHMP4BP1-201ENST00000556017 TPT1P13693 172 aaKnown RBP9.2□□□□□ -0.94
CHMP4BP1-201ENST00000556017 SDIM1Q6ZPB5 146 aa9.2□□□□□ -0.94
CHMP4BP1-201ENST00000556017 ZFP82Q8N141 532 aa9.2□□□□□ -0.94
CHMP4BP1-201ENST00000556017 C15orf54Q8N8G6 183 aa9.2□□□□□ -0.94
CHMP4BP1-201ENST00000556017 PRR34Q9NV39 138 aa9.2□□□□□ -0.94
CHMP4BP1-201ENST00000556017 RAB4BP61018 213 aa9.19□□□□□ -0.94
CHMP4BP1-201ENST00000556017 RPL19P84098 196 aaKnown RBP9.19□□□□□ -0.94
CHMP4BP1-201ENST00000556017 C14orf177Q52M58 125 aa9.19□□□□□ -0.94
CHMP4BP1-201ENST00000556017 OR10AG1Q8NH19 301 aa9.19□□□□□ -0.94
CHMP4BP1-201ENST00000556017 FMC1Q96HJ9 113 aa9.19□□□□□ -0.94
CHMP4BP1-201ENST00000556017 NKX6-2Q9C056 277 aaPredicted RBP9.19□□□□□ -0.94
CHMP4BP1-201ENST00000556017 KIF25-AS1Q9Y6Z4 181 aa9.19□□□□□ -0.94
CHMP4BP1-201ENST00000556017 TMEM262E9PQX1 116 aa9.18□□□□□ -0.94
CHMP4BP1-201ENST00000556017 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
CHMP4BP1-201ENST00000556017 DGAT2L7PQ6IED9 249 aa9.18□□□□□ -0.94
CHMP4BP1-201ENST00000556017 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
CHMP4BP1-201ENST00000556017 VAX2Q9UIW0 290 aa9.18□□□□□ -0.94
CHMP4BP1-201ENST00000556017 LRP2P98164 4655 aa9.17□□□□□ -0.94
CHMP4BP1-201ENST00000556017 PTTG1O95997 202 aa9.17□□□□□ -0.94
CHMP4BP1-201ENST00000556017 ANGP03950 147 aaKnown RBP9.17□□□□□ -0.94
CHMP4BP1-201ENST00000556017 MLST8Q9BVC4 326 aa9.17□□□□□ -0.94
CHMP4BP1-201ENST00000556017 CYTL1Q9NRR1 136 aa9.17□□□□□ -0.94
CHMP4BP1-201ENST00000556017 SNAI2O43623 268 aa9.16□□□□□ -0.94
CHMP4BP1-201ENST00000556017 HLA-DQA1P01909 254 aa9.16□□□□□ -0.94
CHMP4BP1-201ENST00000556017 GIPP09681 153 aaPredicted RBP9.16□□□□□ -0.94
CHMP4BP1-201ENST00000556017 FHITP49789 147 aa9.16□□□□□ -0.94
CHMP4BP1-201ENST00000556017 MIAQ16674 131 aa9.16□□□□□ -0.94
CHMP4BP1-201ENST00000556017 MED28Q9H204 178 aa9.16□□□□□ -0.94
CHMP4BP1-201ENST00000556017 MUC21A0A0G2JKD1 596 aa9.15□□□□□ -0.94
CHMP4BP1-201ENST00000556017 MUC21A0A140T8X8 626 aa9.15□□□□□ -0.94
CHMP4BP1-201ENST00000556017 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
CHMP4BP1-201ENST00000556017 CRPP02741 224 aa9.15□□□□□ -0.94
CHMP4BP1-201ENST00000556017 SLPIP03973 132 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms