RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 PEBP1P30086 187 aaKnown RBP1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 CMC4P56277 68 aaPredicted RBP1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 SNRPGP62308 76 aaKnown RBP1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 MRPL51Q4U2R6 128 aaKnown RBP1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 LINC00483Q53H64 154 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 ATP5EP2Q5VTU8 51 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 VMO1Q7Z5L0 202 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 UBE2WQ96B02 151 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 SCGB3A1Q96QR1 104 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 TXNDC17Q9BRA2 123 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 FAM103A1Q9BTL3 118 aaKnown RBP1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 TIMM21Q9BVV7 248 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 CYP4F30PQ9H0H9 118 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 SND1-IT1Q9HBX3 110 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 HILPDAQ9Y5L2 63 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 CD163L1Q9NR16 1453 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 KMT2EQ8IZD2 1858 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 MYLKQ15746 1914 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 MAST2Q6P0Q8 1798 aa1.85□□□□□ -2.11
MTHFD1-212ENST00000555858 NACAE9PAV3 2078 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 DOCK9Q9BZ29 2069 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 SHPRHQ149N8 1683 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 PRRC2AP48634 2157 aaKnown RBP1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV1D-17A0A075B6S4 117 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 TRAV1-2A0A0B4J238 106 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV6D-41A0A0C4DH26 115 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV1-12A0A0C4DH73 117 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 MYMXA0A1B0GTQ4 84 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 A0A1B0GWA3 101 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 C19orf71A6NCJ1 209 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 CYSRT1A8MQ03 144 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 LEPROTO15243 131 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 IGKV1D-12P01611 117 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 RNASE2P10153 161 aaKnown RBP1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 RBM3P98179 157 aaKnown RBP1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 ZNF816Q0VGE8 651 aaPredicted RBP1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 ZNF56Q15929 161 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 SOSTDC1Q6X4U4 206 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 NDUFA11Q86Y39 141 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 DAND5Q8N907 189 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 B9D2Q9BPU9 175 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 SMIM7Q9BQ49 75 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 PLA2G12AQ9BZM1 189 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 CYSTM1Q9H1C7 97 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 C2orf16Q68DN1 1984 aa1.84□□□□□ -2.11
MTHFD1-212ENST00000555858 LOC285556D6RIA3 1793 aa1.84□□□□□ -2.12
MTHFD1-212ENST00000555858 CITO14578 2027 aa1.84□□□□□ -2.12
MTHFD1-212ENST00000555858 SLX4Q8IY92 1834 aa1.84□□□□□ -2.12
MTHFD1-212ENST00000555858 PAPPAQ13219 1627 aa1.84□□□□□ -2.12
MTHFD1-212ENST00000555858 TRPM7Q96QT4 1865 aa1.84□□□□□ -2.12
MTHFD1-212ENST00000555858 NHSQ6T4R5 1651 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 IGLV3-9A0A075B6K5 115 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 IGKV2D-24A0A075B6R9 120 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 TRBV7-1A0A0A6YYK4 115 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 TRBV10-2A0A0K0K1G8 114 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 GNRH2O43555 120 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 HMGN2P05204 90 aaKnown RBP1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 XCL1P47992 114 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 FXYD2P54710 66 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 FXYD7P58549 80 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 BSPH1Q075Z2 132 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 NCBP2-AS2Q69YL0 99 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 Q6JHZ5 121 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 IGFL3Q6UXB1 125 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 ZNF826PQ6ZT77 177 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 RPRMLQ8N4K4 120 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 PFN4Q8NHR9 129 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 TMEM141Q96I45 108 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 FAM167A-AS1Q96KT0 104 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 NABP2Q9BQ15 211 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 NHP2Q9NX24 153 aaKnown RBP1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 GNG13Q9P2W3 67 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 DUOX1Q9NRD9 1551 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 NRXN3Q9Y4C0 1643 aa1.83□□□□□ -2.12
MTHFD1-212ENST00000555858 NUP214P35658 2090 aaPredicted RBP1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 ANKRD12Q6UB98 2062 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 DOCK8Q8NF50 2099 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 MYO18AQ92614 2054 aaKnown RBP1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 STRCP1A6NGW2 1772 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 COL14A1Q05707 1796 aaKnown RBP1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 CABIN1Q9Y6J0 2220 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 MCM3APO60318 1980 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 IGLV4-60A0A075B6I1 120 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 A0A0B4J2C4 111 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 TRBV10-3A0A0K0K1G6 114 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 HCRTO43612 131 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 ERC2-IT1O76042 136 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 LEPROTL1O95214 131 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 LHBP01229 141 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 MSMBP08118 114 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 IFI27P40305 119 aaPredicted RBP1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 UBE2D1P51668 147 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 KRTAP10-3P60369 221 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 KRTAP10-5P60370 271 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 DYNLT1P63172 113 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 ATXN8Q156A1 80 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 LYPD5Q6UWN5 251 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 CLECL1Q8IZS7 167 aa1.82□□□□□ -2.12
MTHFD1-212ENST00000555858 LINC00269Q8N2A0 174 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms