RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 MUC21A0A140T8X8 626 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 A0A1B0GUT8 65 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 XKRY2A2RUG3 117 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 CBY3A6NI87 242 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 H3BVH4 76 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 INSP01308 110 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 AMBPP02760 352 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 PRM2P04554 102 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 ASIPP42127 132 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 RPS10P46783 165 aaKnown RBP4.53□□□□□ -1.68
LINC00643-203ENST00000555518 RIPPLY3P57055 190 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 HBBP68871 147 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 MORN3Q6PF18 240 aaPredicted RBP4.53□□□□□ -1.68
LINC00643-203ENST00000555518 RASL11AQ6T310 242 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 ZNF493Q6ZR52 646 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 GTSCR1Q86UQ5 136 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 C11orf72Q8NBR9 251 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 OR10AG1Q8NH19 301 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 MSRB1Q9NZV6 116 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 XCL2Q9UBD3 114 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 NAGKQ9UJ70 344 aa4.53□□□□□ -1.68
LINC00643-203ENST00000555518 PLAC8L1A1L4L8 177 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 A8MZ25 164 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 TRGC2P03986 189 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 IGHV4-30-4P0DP06 118 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 AZU1P20160 251 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 SLAQ13239 276 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 PIK3CD-AS1Q5SR53 167 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 KPRPQ5T749 579 aaPredicted RBP4.52□□□□□ -1.69
LINC00643-203ENST00000555518 WDR73Q6P4I2 378 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 ZNF705AQ6ZN79 300 aaPredicted RBP4.52□□□□□ -1.69
LINC00643-203ENST00000555518 KCNS1Q96KK3 526 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 GNB1LQ9BYB4 327 aa4.52□□□□□ -1.69
LINC00643-203ENST00000555518 KIR2DL5BA0A0G2JN68 375 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 KIR2DL5BA0A0G2JPC4 375 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 A0A1B0GW15 77 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 SNURFLB1AK76 121 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 F2Z2F3 143 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 HLA-DQA1P01909 254 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 NTF3P20783 257 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 CAMPP49913 170 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 NUTF2P61970 127 aaKnown RBP4.51□□□□□ -1.69
LINC00643-203ENST00000555518 RIGQ13278 110 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 KRTAP21-3Q3LHN1 58 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 COX19Q49B96 90 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 SERTAD4-AS1Q5TG53 156 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 FAM159AQ6UWV7 190 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 KIR2DL5AQ8N109 375 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 TMEM256Q8N2U0 113 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 KIR2DL5BQ8NHK3 375 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 RNASE8Q8TDE3 154 aaKnown RBP4.51□□□□□ -1.69
LINC00643-203ENST00000555518 FRZBQ92765 325 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 RNF185Q96GF1 192 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 TPPP3Q9BW30 176 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 CSTL1Q9H114 145 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 KIF25-AS1Q9Y6Z4 181 aa4.51□□□□□ -1.69
LINC00643-203ENST00000555518 LOC102724200A0A096LPH7 203 aaPredicted RBP4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BKO60814 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 MT-ND6P03923 174 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BJP06899 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 TRGC1P0CF51 173 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BOP23527 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BBP33778 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BDP58876 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 LINC00315P59091 139 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BCP62807 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 CACNG7P62955 275 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 FABP9Q0Z7S8 132 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST2H2BEQ16778 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BHQ93079 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 PTH2Q96A98 100 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 ZNF479Q96JC4 524 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 LINC01587Q99440 93 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BNQ99877 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 HIST1H2BMQ99879 126 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 TMEM191AQ9H0A3 160 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 JPT2Q9H910 190 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 TRAPPC1Q9Y5R8 145 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 NACAE9PAV3 2078 aa4.5□□□□□ -1.69
LINC00643-203ENST00000555518 C1orf196B1AJZ1 125 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 GAS8-AS1O95177 125 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 SCGB1D1O95968 90 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 APCSP02743 223 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 EVI2AP22794 236 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 S100A4P26447 101 aaKnown RBP4.49□□□□□ -1.69
LINC00643-203ENST00000555518 KIAA1644Q3SXP7 199 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 FAM104BQ5XKR9 115 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 UFSP1Q6NVU6 142 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 AMN1Q8IY45 258 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 ZFP82Q8N141 532 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 POM121L12Q8N7R1 296 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 TMEM263Q8WUH6 116 aaKnown RBP4.49□□□□□ -1.69
LINC00643-203ENST00000555518 C1QTNF4Q9BXJ3 329 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 GSN-AS1Q9NRJ2 163 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 TIMM8BQ9Y5J9 83 aaPredicted RBP4.49□□□□□ -1.69
LINC00643-203ENST00000555518 U3KQK5 164 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 TENM3Q9P273 2699 aa4.49□□□□□ -1.69
LINC00643-203ENST00000555518 NBEAL2Q6ZNJ1 2754 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms