RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SNAI2O43623 268 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 SMIM17P0DL12 118 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 SSTP61278 116 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 ZNF56Q15929 161 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 ATP6V0E2Q8NHE4 81 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 SAMD10Q9BYL1 202 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 LY96Q9Y6Y9 160 aa8.31□□□□□ -1.08
SRP54-206ENST00000555317 MUC21A0A0G2JKD1 596 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 C19orf71A6NCJ1 209 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 GAGE12JA6NER3 117 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 GZMBP10144 247 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 EVI2AP22794 236 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 TIRAPP58753 221 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 GAGE1Q13065 139 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 GAGE4Q13068 117 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 GAGE5Q13069 117 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 GAGE13Q4V321 117 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 OR10J3Q5JRS4 329 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 FAM210AQ96ND0 272 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 AP1S3Q96PC3 154 aa8.3□□□□□ -1.08
SRP54-206ENST00000555317 F5H697 171 aa8.29□□□□□ -1.08
SRP54-206ENST00000555317 CACNG7P62955 275 aa8.29□□□□□ -1.08
SRP54-206ENST00000555317 UFSP1Q6NVU6 142 aa8.29□□□□□ -1.08
SRP54-206ENST00000555317 TEX261Q6UWH6 196 aa8.29□□□□□ -1.08
SRP54-206ENST00000555317 Q6ZSN1 163 aa8.29□□□□□ -1.08
SRP54-206ENST00000555317 ZNF575Q86XF7 245 aa8.29□□□□□ -1.08
SRP54-206ENST00000555317 C14orf178Q8N769 122 aaPredicted RBP8.29□□□□□ -1.08
SRP54-206ENST00000555317 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
SRP54-206ENST00000555317 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
SRP54-206ENST00000555317 GTSF1LQ9H1H1 148 aa8.29□□□□□ -1.08
SRP54-206ENST00000555317 RPP21Q9H633 154 aaKnown RBP8.29□□□□□ -1.08
SRP54-206ENST00000555317 F2Z2F3 143 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 K7EP13 123 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 NDUFS6O75380 124 aaKnown RBP8.28□□□□□ -1.08
SRP54-206ENST00000555317 CRYGDP07320 174 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
SRP54-206ENST00000555317 RAB4BP61018 213 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 WFDC10BQ8IUB3 73 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 C10orf126Q8N4M7 172 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 OCC1Q8TAD7 63 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 KRTAP1-5Q9BYS1 174 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 DNAH2Q9P225 4427 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 BIRC6Q9NR09 4857 aa8.28□□□□□ -1.08
SRP54-206ENST00000555317 TRBV10-1A0A0K0K1A3 114 aa8.27□□□□□ -1.09
SRP54-206ENST00000555317 ZNF727A8MUV8 499 aa8.27□□□□□ -1.09
SRP54-206ENST00000555317 K7EN84 100 aa8.27□□□□□ -1.09
SRP54-206ENST00000555317 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
SRP54-206ENST00000555317 LELP1Q5T871 98 aa8.27□□□□□ -1.09
SRP54-206ENST00000555317 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.27□□□□□ -1.09
SRP54-206ENST00000555317 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
SRP54-206ENST00000555317 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
SRP54-206ENST00000555317 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
SRP54-206ENST00000555317 RNASE7Q9H1E1 156 aaKnown RBP8.27□□□□□ -1.09
SRP54-206ENST00000555317 A0A087WWC5 75 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 IGHV3-38A0A0C4DH36 116 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 GATCO43716 136 aaKnown RBP8.26□□□□□ -1.09
SRP54-206ENST00000555317 MGPP08493 103 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 TRGC1P0CF51 173 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 DNAH10OSP0CZ25 163 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 LINC00315P59091 139 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 ERVFC1-1P60608 527 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 LYZL1Q6UWQ5 148 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 DNAH17Q9UFH2 4485 aa8.26□□□□□ -1.09
SRP54-206ENST00000555317 PEA15Q15121 130 aa8.25□□□□□ -1.09
SRP54-206ENST00000555317 TRBV7-3A0A075B6L6 115 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 H7C1H1 209 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 SRP19P09132 144 aaKnown RBP8.24□□□□□ -1.09
SRP54-206ENST00000555317 LINC00694P0DN24 101 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 CTRLP40313 264 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 RAB14P61106 215 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 FAM74A3Q4VXF1 159 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 LINC01556Q5JQF7 62 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 FAM231DQ6ZW35 169 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 SMIM15Q7Z3B0 74 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 MSRB1Q9NZV6 116 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 URGCP-MRPS24S4R325 110 aa8.24□□□□□ -1.09
SRP54-206ENST00000555317 FAT2Q9NYQ8 4349 aa8.23□□□□□ -1.09
SRP54-206ENST00000555317 A8MWL6 223 aa8.23□□□□□ -1.09
SRP54-206ENST00000555317 TNP2Q05952 138 aa8.23□□□□□ -1.09
SRP54-206ENST00000555317 TWIST1Q15672 202 aa8.23□□□□□ -1.09
SRP54-206ENST00000555317 WDR73Q6P4I2 378 aa8.23□□□□□ -1.09
SRP54-206ENST00000555317 KCNIP4Q6PIL6 250 aa8.23□□□□□ -1.09
SRP54-206ENST00000555317 LINC01551Q86U37 167 aa8.23□□□□□ -1.09
SRP54-206ENST00000555317 C15orf54Q8N8G6 183 aa8.23□□□□□ -1.09
SRP54-206ENST00000555317 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 A0A1B0GVY2 172 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 EREGO14944 169 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 IGHV3-30P01768 117 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 IGHV3-33P01772 117 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 IGHV3-30-3P0DP02 117 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 IGHV3-30-5P0DP03 117 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 NTF3P20783 257 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 UBE2D3P61077 147 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 UBE2D2P62837 147 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 TMEM241Q24JQ0 296 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms