RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 RIGQ13278 110 aa11.58□□□□□ -0.56
SPTLC2-203ENST00000554901 TWIST1Q15672 202 aa11.58□□□□□ -0.56
SPTLC2-203ENST00000554901 KLK5Q9Y337 293 aaPredicted RBP11.58□□□□□ -0.56
SPTLC2-203ENST00000554901 TRGV4A0A0C4DH28 118 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 IGHV3-53P01767 116 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 CRYGDP07320 174 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 HOXA5P20719 270 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 FHL2Q14192 279 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 UFSP1Q6NVU6 142 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 JPT2Q9H910 190 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 PRO0255Q9UI72 69 aa11.57□□□□□ -0.56
SPTLC2-203ENST00000554901 H3BNG1 76 aa11.56□□□□□ -0.56
SPTLC2-203ENST00000554901 SSTP61278 116 aa11.56□□□□□ -0.56
SPTLC2-203ENST00000554901 KCNIP4Q6PIL6 250 aa11.56□□□□□ -0.56
SPTLC2-203ENST00000554901 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
SPTLC2-203ENST00000554901 MSRB1Q9NZV6 116 aa11.56□□□□□ -0.56
SPTLC2-203ENST00000554901 TRAV9-1A0A075B6T8 112 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 TCTAP57738 103 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 SAMD10Q9BYL1 202 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 HHLA3Q9XRX5 114 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 TRBV6-4A0A1B0GX49 114 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 S100A8P05109 93 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 GATA1P15976 413 aaPredicted RBP11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 S100PP25815 95 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 FAM74A4Q5TZK3 123 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 C14orf178Q8N769 122 aaPredicted RBP11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 DPH3P1Q9H4G8 78 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 KIF25-AS1Q9Y6Z4 181 aa11.55□□□□□ -0.56
SPTLC2-203ENST00000554901 A0A087WWL8 130 aa11.54□□□□□ -0.56
SPTLC2-203ENST00000554901 CRYBA4P53673 196 aa11.54□□□□□ -0.56
SPTLC2-203ENST00000554901 RAB4BP61018 213 aa11.54□□□□□ -0.56
SPTLC2-203ENST00000554901 BTF3L4Q96K17 158 aa11.54□□□□□ -0.56
SPTLC2-203ENST00000554901 NACAE9PAV3 2078 aa11.53□□□□□ -0.56
SPTLC2-203ENST00000554901 DNAH7Q8WXX0 4024 aa11.53□□□□□ -0.56
SPTLC2-203ENST00000554901 EVI2AP22794 236 aa11.53□□□□□ -0.56
SPTLC2-203ENST00000554901 FAM3BP58499 235 aaPredicted RBP11.53□□□□□ -0.56
SPTLC2-203ENST00000554901 C15orf53Q8NAA6 179 aa11.53□□□□□ -0.56
SPTLC2-203ENST00000554901 TMEM191AQ9H0A3 160 aa11.53□□□□□ -0.56
SPTLC2-203ENST00000554901 TRAV26-1A0A087WT03 109 aa11.52□□□□□ -0.57
SPTLC2-203ENST00000554901 A0A1B0GXF2 115 aa11.52□□□□□ -0.57
SPTLC2-203ENST00000554901 PAX4O43316 350 aa11.52□□□□□ -0.57
SPTLC2-203ENST00000554901 LINC00315P59091 139 aa11.52□□□□□ -0.57
SPTLC2-203ENST00000554901 HBBP68871 147 aa11.52□□□□□ -0.57
SPTLC2-203ENST00000554901 RHOHQ15669 191 aa11.52□□□□□ -0.57
SPTLC2-203ENST00000554901 TMEM88Q6PEY1 159 aa11.52□□□□□ -0.57
SPTLC2-203ENST00000554901 FRZBQ92765 325 aa11.52□□□□□ -0.57
SPTLC2-203ENST00000554901 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
SPTLC2-203ENST00000554901 IGLL5B9A064 214 aa11.51□□□□□ -0.57
SPTLC2-203ENST00000554901 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
SPTLC2-203ENST00000554901 ZFAND6Q6FIF0 208 aa11.51□□□□□ -0.57
SPTLC2-203ENST00000554901 RASL11AQ6T310 242 aa11.51□□□□□ -0.57
SPTLC2-203ENST00000554901 SLC25A29Q8N8R3 303 aa11.51□□□□□ -0.57
SPTLC2-203ENST00000554901 VSIG2Q96IQ7 327 aa11.51□□□□□ -0.57
SPTLC2-203ENST00000554901 PRADC1Q9BSG0 188 aa11.51□□□□□ -0.57
SPTLC2-203ENST00000554901 ZNF56Q15929 161 aa11.5□□□□□ -0.57
SPTLC2-203ENST00000554901 MRPL54Q6P161 138 aaKnown RBP11.5□□□□□ -0.57
SPTLC2-203ENST00000554901 GATD1Q8NB37 220 aa11.5□□□□□ -0.57
SPTLC2-203ENST00000554901 TRBV10-1A0A0K0K1A3 114 aa11.5□□□□□ -0.57
SPTLC2-203ENST00000554901 H7C1H1 209 aa11.5□□□□□ -0.57
SPTLC2-203ENST00000554901 K7EQD1 137 aa11.5□□□□□ -0.57
SPTLC2-203ENST00000554901 F5H697 171 aa11.49□□□□□ -0.57
SPTLC2-203ENST00000554901 Q6ZSN1 163 aa11.49□□□□□ -0.57
SPTLC2-203ENST00000554901 A0A0J9YY99 117 aa11.48□□□□□ -0.57
SPTLC2-203ENST00000554901 MGPP08493 103 aa11.48□□□□□ -0.57
SPTLC2-203ENST00000554901 CAMPP49913 170 aa11.48□□□□□ -0.57
SPTLC2-203ENST00000554901 MRPL23Q16540 153 aaKnown RBP11.48□□□□□ -0.57
SPTLC2-203ENST00000554901 ATRAIDQ6UW56 229 aa11.48□□□□□ -0.57
SPTLC2-203ENST00000554901 ICOSQ9Y6W8 199 aa11.48□□□□□ -0.57
SPTLC2-203ENST00000554901 SH2D6Q7Z4S9 175 aa11.47□□□□□ -0.57
SPTLC2-203ENST00000554901 URGCP-MRPS24S4R325 110 aa11.47□□□□□ -0.57
SPTLC2-203ENST00000554901 CSMD3Q7Z407 3707 aa11.46□□□□□ -0.57
SPTLC2-203ENST00000554901 GYPEP15421 78 aa11.46□□□□□ -0.57
SPTLC2-203ENST00000554901 COX19Q49B96 90 aa11.46□□□□□ -0.57
SPTLC2-203ENST00000554901 FAM104BQ5XKR9 115 aa11.46□□□□□ -0.57
SPTLC2-203ENST00000554901 APLNQ9ULZ1 77 aa11.46□□□□□ -0.57
SPTLC2-203ENST00000554901 M0QY20 66 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 RAB4AP20338 218 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 SUMO4Q6EEV6 95 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 MRAP2Q96G30 205 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 SMCO4Q9NRQ5 59 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 A0A096LPF7 62 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 NUDT3O95989 172 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 RPL36AP83881 106 aaKnown RBP11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 ELOBQ15370 118 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 AMN1Q8IY45 258 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 RPL36ALQ969Q0 106 aaKnown RBP11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 RNF185Q96GF1 192 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 DNAJC30Q96LL9 226 aa11.45□□□□□ -0.58
SPTLC2-203ENST00000554901 SRIP30626 198 aa11.44□□□□□ -0.58
SPTLC2-203ENST00000554901 TRBV7-3A0A075B6L6 115 aa11.43□□□□□ -0.58
SPTLC2-203ENST00000554901 LINC00694P0DN24 101 aa11.43□□□□□ -0.58
SPTLC2-203ENST00000554901 NEGR1Q7Z3B1 354 aa11.43□□□□□ -0.58
SPTLC2-203ENST00000554901 NIT2Q9NQR4 276 aa11.43□□□□□ -0.58
SPTLC2-203ENST00000554901 TENM2Q9NT68 2774 aa11.43□□□□□ -0.58
SPTLC2-203ENST00000554901 DYNC2H1Q8NCM8 4307 aaKnown RBP11.42□□□□□ -0.58
SPTLC2-203ENST00000554901 LOC100131303A0A0U1RQF7 123 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms