RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 EDA2RQ9HAV5 297 aa12.74□□□□□ -0.37
PCNX1-209ENST00000554879 AJUBAQ96IF1 538 aa12.74□□□□□ -0.37
PCNX1-209ENST00000554879 UTP20O75691 2785 aaKnown RBP12.74□□□□□ -0.37
PCNX1-209ENST00000554879 TRAV2A0A0B4J234 112 aa12.74□□□□□ -0.37
PCNX1-209ENST00000554879 C15orf53Q8NAA6 179 aa12.74□□□□□ -0.37
PCNX1-209ENST00000554879 ZNF815PA8K554 130 aa12.73□□□□□ -0.37
PCNX1-209ENST00000554879 NSUN5P1Q3KNT7 163 aa12.73□□□□□ -0.37
PCNX1-209ENST00000554879 NDUFA4O00483 81 aa12.73□□□□□ -0.37
PCNX1-209ENST00000554879 NDUFV3P56181 108 aaKnown RBP12.73□□□□□ -0.37
PCNX1-209ENST00000554879 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.73□□□□□ -0.37
PCNX1-209ENST00000554879 CRYBG3Q68DQ2 2970 aa12.73□□□□□ -0.37
PCNX1-209ENST00000554879 IGHV3OR16-12A0A075B7B8 117 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 TMEM213A2RRL7 107 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 BUB3O43684 328 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 MGPP08493 103 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 LGALS9BQ3B8N2 356 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 LGALS9CQ6DKI2 356 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 M0R381 172 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 SH2D1AO60880 128 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 OR13C6PQ8NH95 151 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 SMG1Q96Q15 3661 aaKnown RBP12.72□□□□□ -0.37
PCNX1-209ENST00000554879 LRRC75A-AS1Q8N1F1 130 aa12.72□□□□□ -0.37
PCNX1-209ENST00000554879 DEFB1P60022 68 aa12.71□□□□□ -0.37
PCNX1-209ENST00000554879 HLA-DRB4P13762 266 aa12.71□□□□□ -0.37
PCNX1-209ENST00000554879 PPDPFQ9H3Y8 114 aa12.71□□□□□ -0.37
PCNX1-209ENST00000554879 HLA-DRB4X5D2U9 266 aa12.71□□□□□ -0.37
PCNX1-209ENST00000554879 C9orf139Q6ZV77 190 aa12.71□□□□□ -0.38
PCNX1-209ENST00000554879 FAM110AQ9BQ89 295 aa12.71□□□□□ -0.38
PCNX1-209ENST00000554879 F6UB75 175 aa12.7□□□□□ -0.38
PCNX1-209ENST00000554879 PIFOQ8TCI5 191 aa12.7□□□□□ -0.38
PCNX1-209ENST00000554879 ASH1LQ9NR48 2969 aaKnown RBP12.7□□□□□ -0.38
PCNX1-209ENST00000554879 TMEM75Q8N9X5 138 aa12.7□□□□□ -0.38
PCNX1-209ENST00000554879 PHLDA3Q9Y5J5 127 aa12.7□□□□□ -0.38
PCNX1-209ENST00000554879 WIPF2Q8TF74 440 aaPredicted RBP12.7□□□□□ -0.38
PCNX1-209ENST00000554879 NTN5Q8WTR8 489 aaPredicted RBP12.7□□□□□ -0.38
PCNX1-209ENST00000554879 DCHS2Q6V1P9 2916 aa12.69□□□□□ -0.38
PCNX1-209ENST00000554879 TNFRSF6BO95407 300 aa12.69□□□□□ -0.38
PCNX1-209ENST00000554879 HRNRQ86YZ3 2850 aaPredicted RBP12.69□□□□□ -0.38
PCNX1-209ENST00000554879 Q6AWC8 147 aa12.69□□□□□ -0.38
PCNX1-209ENST00000554879 PRAC2D3DTV9 90 aa12.68□□□□□ -0.38
PCNX1-209ENST00000554879 LYZL1Q6UWQ5 148 aa12.68□□□□□ -0.38
PCNX1-209ENST00000554879 PRR25Q96S07 402 aa12.68□□□□□ -0.38
PCNX1-209ENST00000554879 TMEM158Q8WZ71 300 aa12.68□□□□□ -0.38
PCNX1-209ENST00000554879 PF4P02776 101 aa12.68□□□□□ -0.38
PCNX1-209ENST00000554879 IGF1P05019 195 aa12.68□□□□□ -0.38
PCNX1-209ENST00000554879 IGF2BP2-AS1Q96M15 143 aa12.68□□□□□ -0.38
PCNX1-209ENST00000554879 PEMTQ9UBM1 199 aa12.68□□□□□ -0.38
PCNX1-209ENST00000554879 H3BUA1 57 aa12.67□□□□□ -0.38
PCNX1-209ENST00000554879 TRAV12-3A0A0B4J271 114 aa12.67□□□□□ -0.38
PCNX1-209ENST00000554879 IGHV7-4-1A0A0J9YVY3 117 aa12.67□□□□□ -0.38
PCNX1-209ENST00000554879 FGF6P10767 208 aa12.67□□□□□ -0.38
PCNX1-209ENST00000554879 HOXD3P31249 432 aaPredicted RBP12.67□□□□□ -0.38
PCNX1-209ENST00000554879 ELANEP08246 267 aa12.67□□□□□ -0.38
PCNX1-209ENST00000554879 URB1-AS1Q96HZ7 61 aa12.67□□□□□ -0.38
PCNX1-209ENST00000554879 CHCHD5Q9BSY4 110 aa12.67□□□□□ -0.38
PCNX1-209ENST00000554879 MRPL35Q9NZE8 188 aaKnown RBP12.67□□□□□ -0.38
PCNX1-209ENST00000554879 ZFP2Q6ZN57 461 aa12.66□□□□□ -0.38
PCNX1-209ENST00000554879 TEN1Q86WV5 123 aa12.66□□□□□ -0.38
PCNX1-209ENST00000554879 CRXO43186 299 aaPredicted RBP12.66□□□□□ -0.38
PCNX1-209ENST00000554879 SLURP1P55000 103 aa12.66□□□□□ -0.38
PCNX1-209ENST00000554879 C5orf47Q569G3 176 aa12.66□□□□□ -0.38
PCNX1-209ENST00000554879 TMEM170BQ5T4T1 132 aa12.66□□□□□ -0.38
PCNX1-209ENST00000554879 Q6YL49 198 aa12.66□□□□□ -0.38
PCNX1-209ENST00000554879 IGKV2D-26A0A0A0MRZ7 120 aa12.66□□□□□ -0.38
PCNX1-209ENST00000554879 ANKRD29Q8N6D5 301 aa12.66□□□□□ -0.38
PCNX1-209ENST00000554879 E9PLD3 99 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 OVOL1O14753 267 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 TMEM190Q8WZ59 177 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 SLC25A20O43772 301 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 IGLV2-8P01709 118 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 PMVKQ15126 192 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 FAM74A4Q5TZK3 123 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 FAM231DQ6ZW35 169 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 ATP5LO75964 103 aa12.65□□□□□ -0.38
PCNX1-209ENST00000554879 AGRNO00468 2067 aa12.64□□□□□ -0.39
PCNX1-209ENST00000554879 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
PCNX1-209ENST00000554879 A0A087WW49 117 aa12.64□□□□□ -0.39
PCNX1-209ENST00000554879 TRAV4A0A0B4J268 109 aa12.64□□□□□ -0.39
PCNX1-209ENST00000554879 SCGB3A1Q96QR1 104 aa12.64□□□□□ -0.39
PCNX1-209ENST00000554879 C1orf43Q9BWL3 253 aa12.64□□□□□ -0.39
PCNX1-209ENST00000554879 F8W735 103 aaPredicted RBP12.64□□□□□ -0.39
PCNX1-209ENST00000554879 LINC00322Q6ZN03 302 aaPredicted RBP12.63□□□□□ -0.39
PCNX1-209ENST00000554879 RS1O15537 224 aa12.63□□□□□ -0.39
PCNX1-209ENST00000554879 SMR3AQ99954 134 aa12.63□□□□□ -0.39
PCNX1-209ENST00000554879 SPXQ9BT56 116 aa12.63□□□□□ -0.39
PCNX1-209ENST00000554879 CD7P09564 240 aa12.63□□□□□ -0.39
PCNX1-209ENST00000554879 ZFAND3Q9H8U3 227 aa12.63□□□□□ -0.39
PCNX1-209ENST00000554879 DNAJC9-AS1A6NH13 148 aa12.63□□□□□ -0.39
PCNX1-209ENST00000554879 LGALS1P09382 135 aaKnown RBP12.63□□□□□ -0.39
PCNX1-209ENST00000554879 LINC01619G3V211 115 aa12.62□□□□□ -0.39
PCNX1-209ENST00000554879 NPYP01303 97 aa12.62□□□□□ -0.39
PCNX1-209ENST00000554879 ASIPP42127 132 aa12.62□□□□□ -0.39
PCNX1-209ENST00000554879 ZNF492Q9P255 531 aa12.62□□□□□ -0.39
PCNX1-209ENST00000554879 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
PCNX1-209ENST00000554879 DEFB131AP59861 70 aa12.62□□□□□ -0.39
PCNX1-209ENST00000554879 TM2D2Q9BX73 214 aa12.62□□□□□ -0.39
PCNX1-209ENST00000554879 SPRY2O43597 315 aa12.61□□□□□ -0.39
PCNX1-209ENST00000554879 C2orf82Q6UX34 121 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms