RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 EBLN2Q6P2I7 272 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 LYPD5Q6UWN5 251 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 ARPINQ7Z6K5 226 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 EIF4E3Q8N5X7 224 aaKnown RBP0.71□□□□□ -2.3
PRPF39-208ENST00000554785 ZNF738Q8NE65 137 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 VSTM2AQ8TAG5 236 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 CANT1Q8WVQ1 401 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 ANP32BQ92688 251 aaKnown RBP0.71□□□□□ -2.3
PRPF39-208ENST00000554785 LSM10Q969L4 123 aaKnown RBP0.71□□□□□ -2.3
PRPF39-208ENST00000554785 ACY3Q96HD9 319 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM109Q9BVC6 243 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 GABARAPL1Q9H0R8 117 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 DOK5Q9P104 306 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 CKLFQ9UBR5 152 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 FUT9Q9Y231 359 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 PRELID3BQ9Y3B1 194 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 MUC12Q9UKN1 5478 aa0.71□□□□□ -2.3
PRPF39-208ENST00000554785 TRAV26-2A0A0B4J265 109 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TRAV12-3A0A0B4J271 114 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 A0A0B4J2C4 111 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 A0A0D9SG52 128 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TEX50A0A1B0GTY4 177 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 LINC00854A0A1B0GVQ3 168 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 SMIM9A6NGZ8 99 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM212A6NML5 194 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM14DPA8MWL7 114 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 GGTLC3B5MD39 225 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 H3BP45 60 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 M0R2T5 61 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 EDF1O60869 148 aaKnown RBP0.7□□□□□ -2.3
PRPF39-208ENST00000554785 ATG12O94817 140 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 FAM107AO95990 144 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 HMGN1P05114 100 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 PSMB9P28065 219 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 EIF2B2P49770 351 aaKnown RBP0.7□□□□□ -2.3
PRPF39-208ENST00000554785 RAB5CP51148 216 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 DAPP51397 102 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 DEFA3P59666 94 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 HBG1P69891 147 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 HBG2P69892 147 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 BAXQ07812 192 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 OR2F1Q13607 317 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 PSG3Q16557 428 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 GLT8D1Q68CQ7 371 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 SFXN4Q6P4A7 337 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 SPATA24Q86W54 205 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 GID4Q8IVV7 300 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM263Q8WUH6 116 aaKnown RBP0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TMEM203Q969S6 136 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 DGCR14Q96DF8 476 aaKnown RBP0.7□□□□□ -2.3
PRPF39-208ENST00000554785 LINC00467Q9BRT7 94 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 EFCAB1Q9HAE3 211 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 IFT46Q9NQC8 304 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 NAGKQ9UJ70 344 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 PAIP2BQ9ULR5 123 aaKnown RBP0.7□□□□□ -2.3
PRPF39-208ENST00000554785 IGLV10-54A0A075B6I4 117 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 A0A0J9YX75 114 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 CRYM-AS1A6NIL9 109 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 I3L2K1 104 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 CYB5BO43169 146 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TRAPPC2P0DI81 140 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TRAPPC2BP0DI82 140 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 PSMA1P25786 263 aaKnown RBP0.7□□□□□ -2.3
PRPF39-208ENST00000554785 CRYBB3P26998 211 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 S100A2P29034 98 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TSPOP30536 169 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 SNCAP37840 140 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 ETV6P41212 452 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 CBX5P45973 191 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 AKR1C2P52895 323 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 AP2S1P53680 142 aaPredicted RBP0.7□□□□□ -2.3
PRPF39-208ENST00000554785 PRCDQ00LT1 54 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 ZNF90Q03938 601 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 CD164Q04900 197 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 TPBGQ13641 420 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 BSXQ3C1V8 233 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 COQ5Q5HYK3 327 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 FOXI2Q6ZQN5 318 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 ZNF818PQ6ZRF7 136 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 Q6ZRU5 148 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 LYZL2Q7Z4W2 148 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 DHFR2Q86XF0 187 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 OR8I2Q8N0Y5 310 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 C10orf126Q8N4M7 172 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 ACBD7Q8N6N7 88 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 UBE2WQ96B02 151 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 ZC2HC1AQ96GY0 325 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 PGLYRP3Q96LB9 341 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 LINC01600Q96MT4 127 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 HOPXQ9BPY8 73 aaPredicted RBP0.7□□□□□ -2.3
PRPF39-208ENST00000554785 PECRQ9BY49 303 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 RPRMQ9NS64 109 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 HHLA3Q9XRX5 114 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 URGCP-MRPS24S4R325 110 aa0.7□□□□□ -2.3
PRPF39-208ENST00000554785 MUC17Q685J3 4493 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 KMT2DO14686 5537 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 TRBV6-7A0A0A0MS04 114 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 TRAV5A0A0B4J249 113 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 A6NED7 52 aa0.69□□□□□ -2.3
PRPF39-208ENST00000554785 G3V2T6 193 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms