RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 UPK3BQ9BT76 320 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 PLEKHA3Q9HB20 300 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 LINC00527Q9UJ94 153 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 EPDR1Q9UM22 224 aa3.34□□□□□ -1.87
ATXN3-227ENST00000554491 CR1P17927 2039 aa3.34□□□□□ -1.88
ATXN3-227ENST00000554491 NBEAL2Q6ZNJ1 2754 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 IGKV1D-42A0A075B6H8 117 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 IGHV3OR15-7A0A075B7D8 119 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 SMIM27A0A1W2PRY6 76 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 PGPA6NDG6 321 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 C11orf94C9JXX5 98 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 SMKR1H3BMG3 65 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 K7ERJ3 54 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 UPK2O00526 184 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 VCYO14598 125 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 TCRAP04437 139 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 MGST1P10620 155 aaKnown RBP3.33□□□□□ -1.88
ATXN3-227ENST00000554491 NPPCP23582 126 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 HERVK_113P61574 105 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 GNB1P62873 340 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 ZNF56Q15929 161 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 C1orf100Q5SVJ3 147 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 ATP5L2Q7Z4Y8 100 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 SLC22A24Q8N4F4 322 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 LY6G5BQ8NDX9 201 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 TMEM190Q8WZ59 177 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 ZNF799Q96GE5 643 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 TRGV9Q99603 122 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 TM2D3Q9BRN9 247 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 Q9H8V8 135 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 RBM12B-AS1Q9P1G2 102 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 WDR83OSQ9Y284 106 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 V9GYV3 84 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 USF3Q68DE3 2245 aa3.33□□□□□ -1.88
ATXN3-227ENST00000554491 DNAJC13O75165 2243 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 ABCA1O95477 2261 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
ATXN3-227ENST00000554491 UBE2L5PA0A1B0GUS4 154 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 C17orf51A8MQB3 221 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 SLC25A20O43772 301 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 NDUFS5O43920 106 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 SS18L1O75177 396 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-227ENST00000554491 IGKV1D-16P01601 117 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 BGLAPP02818 100 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 SAA4P35542 130 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 EFNA4P52798 201 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
ATXN3-227ENST00000554491 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-227ENST00000554491 DAD1P61803 113 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 RPL18Q07020 188 aaKnown RBP3.32□□□□□ -1.88
ATXN3-227ENST00000554491 ZNF816Q0VGE8 651 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-227ENST00000554491 PVRIGQ6DKI7 326 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 MARCH3Q86UD3 253 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 IFI27L1Q96BM0 104 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 Q96M85 177 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 PAXXQ9BUH6 204 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 DEFB127Q9H1M4 99 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 R4GMQ9 66 aa3.32□□□□□ -1.88
ATXN3-227ENST00000554491 IGKV3D-11A0A0A0MRZ8 115 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 IGLV1-36A0A0B4J1U3 117 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 IGHV5-51A0A0C4DH38 117 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 PRR32B1ATL7 298 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 NDUFB3O43676 98 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 STATHP02808 62 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 IGKV3-11P04433 115 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 ZNF823P16415 610 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 PCBD1P61457 104 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 ORMDL2Q53FV1 153 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 WDR38Q5JTN6 314 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 SCGB1D4Q6XE38 83 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 FP248Q71RG6 208 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-227ENST00000554491 THAP8Q8NA92 274 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 C11orf52Q96A22 123 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 BIRC6Q9NR09 4857 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 WNK1Q9H4A3 2382 aa3.31□□□□□ -1.88
ATXN3-227ENST00000554491 SNRNP200O75643 2136 aaKnown RBP3.31□□□□□ -1.88
ATXN3-227ENST00000554491 TRBV7-3A0A075B6L6 115 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 TRBV25-1A0A075B6N4 114 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 IGLV5-52A0A0A0MRZ9 124 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 C19orf71A6NCJ1 209 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 SRRM4A7MD48 611 aaKnown RBP3.3□□□□□ -1.88
ATXN3-227ENST00000554491 C8orf87E5RJ46 101 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 INS-IGF2F8WCM5 200 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 H3BMM0 161 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 C16orf97H3BN30 126 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 SRSF10O75494 262 aaKnown RBP3.3□□□□□ -1.88
ATXN3-227ENST00000554491 WISP2O76076 250 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 CLPSP04118 112 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 LGALS3P17931 250 aaKnown RBP3.3□□□□□ -1.88
ATXN3-227ENST00000554491 COX5AP20674 150 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 MYCNOSP40205 109 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 PAX8Q06710 450 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 ECSCRQ19T08 205 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 TMEM155Q4W5P6 130 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 CEMP1Q6PRD7 247 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-227ENST00000554491 LINC00173Q6ZV60 143 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 WDR86Q86TI4 376 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 LYPD6Q86Y78 171 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 RPP25LQ8N5L8 163 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms