RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 NPYP01303 97 aa8.8□□□□□ -1
SHMT2-212ENST00000554467 IGKV3-20P01619 116 aa8.8□□□□□ -1
SHMT2-212ENST00000554467 SS18L2Q9UHA2 77 aa8.8□□□□□ -1
SHMT2-212ENST00000554467 UFC1Q9Y3C8 167 aa8.8□□□□□ -1
SHMT2-212ENST00000554467 GATA1P15976 413 aaPredicted RBP8.8□□□□□ -1
SHMT2-212ENST00000554467 HOXD3P31249 432 aaPredicted RBP8.8□□□□□ -1
SHMT2-212ENST00000554467 SLURP1P55000 103 aa8.8□□□□□ -1
SHMT2-212ENST00000554467 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
SHMT2-212ENST00000554467 NHP2Q9NX24 153 aaKnown RBP8.8□□□□□ -1
SHMT2-212ENST00000554467 IGLL5B9A064 214 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 RNF183Q96D59 192 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 ESM1Q9NQ30 184 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 MRPL16Q9NX20 251 aaKnown RBP8.79□□□□□ -1
SHMT2-212ENST00000554467 MT-ATP8P03928 68 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 ZNF688P0C7X2 276 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 HHLA3Q9XRX5 114 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 RBAKDNA6NC62 111 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 DNAJC9-AS1A6NH13 148 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 FAM104BQ5XKR9 115 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 C9orf47Q6ZRZ4 202 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 OR10J6PQ8NGY7 276 aa8.79□□□□□ -1
SHMT2-212ENST00000554467 LGALS1P09382 135 aaKnown RBP8.78□□□□□ -1
SHMT2-212ENST00000554467 KRTAP1-1Q07627 177 aa8.78□□□□□ -1
SHMT2-212ENST00000554467 SHISA2Q6UWI4 295 aa8.78□□□□□ -1
SHMT2-212ENST00000554467 COX8CQ7Z4L0 72 aa8.78□□□□□ -1
SHMT2-212ENST00000554467 A0A1W2PRX2 142 aa8.78□□□□□ -1
SHMT2-212ENST00000554467 RNASE4P34096 147 aaKnown RBP8.78□□□□□ -1
SHMT2-212ENST00000554467 DEFB104AQ8WTQ1 72 aa8.78□□□□□ -1
SHMT2-212ENST00000554467 CHAC1Q9BUX1 264 aa8.78□□□□□ -1
SHMT2-212ENST00000554467 FN1P02751 2386 aaKnown RBP8.78□□□□□ -1
SHMT2-212ENST00000554467 ZNF418Q8TF45 676 aaPredicted RBP8.77□□□□□ -1
SHMT2-212ENST00000554467 PRSS1P07477 247 aa8.77□□□□□ -1.01
SHMT2-212ENST00000554467 PSMG4Q5JS54 123 aa8.77□□□□□ -1.01
SHMT2-212ENST00000554467 NFE4Q86UQ8 179 aa8.77□□□□□ -1.01
SHMT2-212ENST00000554467 ELANEP08246 267 aa8.77□□□□□ -1.01
SHMT2-212ENST00000554467 IGLC6P0CF74 106 aa8.77□□□□□ -1.01
SHMT2-212ENST00000554467 ZNF580Q9UK33 172 aa8.77□□□□□ -1.01
SHMT2-212ENST00000554467 HIVEP1P15822 2718 aa8.77□□□□□ -1.01
SHMT2-212ENST00000554467 TRBV25-1A0A075B6N4 114 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 TRAV26-2A0A0B4J265 109 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 Q6AWC8 147 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 Q6ZSV7 163 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 CEND1Q8N111 149 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 GATD1Q8NB37 220 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 DCANP1Q8TF63 244 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 MRPL53Q96EL3 112 aaKnown RBP8.76□□□□□ -1.01
SHMT2-212ENST00000554467 TM2D2Q9BX73 214 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 J3QR89 54 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 SPINK8P0C7L1 97 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 SMCPP49901 116 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-212ENST00000554467 XGP55808 180 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 ZFAND2AQ8N6M9 145 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 OR11H1Q8NG94 326 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 UBE2E2Q96LR5 201 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 H3BVH4 76 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 SYT8Q8NBV8 401 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 HIGD1BQ9P298 99 aa8.76□□□□□ -1.01
SHMT2-212ENST00000554467 HBDP02042 147 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 LINC01559Q495D7 138 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 GAGE13Q4V321 117 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 NSD1Q96L73 2696 aaPredicted RBP8.75□□□□□ -1.01
SHMT2-212ENST00000554467 VWFP04275 2813 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 K7EMT4 169 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 LEPP41159 167 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 SRSF2Q01130 221 aaKnown RBP8.75□□□□□ -1.01
SHMT2-212ENST00000554467 MAPKAPK5-AS1Q8N8E1 139 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 ZNF479Q96JC4 524 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 ERG28Q9UKR5 140 aa8.75□□□□□ -1.01
SHMT2-212ENST00000554467 OR11H12B2RN74 326 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 FOXI1Q12951 378 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 KLHL30-AS1Q8NEE0 82 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 OR11H2Q8NH07 326 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 MYOZ3Q8TDC0 251 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 OVOL1O14753 267 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 ZMAT4Q9H898 229 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 U3KQK5 164 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 TRAV12-2A0A075B6T6 113 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 TMEM89A2RUT3 159 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 C12orf74Q32Q52 190 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
SHMT2-212ENST00000554467 A0A1B0GW15 77 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 GNRH2O43555 120 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 LINC00477Q96M19 166 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 MAP1LC3AQ9H492 121 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 SPANXN1Q5VSR9 72 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 Q6ZUT4 128 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 ANXA2RQ3ZCQ2 193 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 GTSCR1Q86UQ5 136 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 C2CD3Q4AC94 2353 aa8.73□□□□□ -1.01
SHMT2-212ENST00000554467 M0R381 172 aa8.72□□□□□ -1.01
SHMT2-212ENST00000554467 APOMO95445 188 aa8.72□□□□□ -1.01
SHMT2-212ENST00000554467 ODF1Q14990 250 aa8.72□□□□□ -1.01
SHMT2-212ENST00000554467 Q8N2B8 174 aa8.72□□□□□ -1.01
SHMT2-212ENST00000554467 TRAV12-3A0A0B4J271 114 aa8.72□□□□□ -1.01
SHMT2-212ENST00000554467 A0A1B0GWB2 263 aa8.72□□□□□ -1.01
SHMT2-212ENST00000554467 ID1P41134 155 aa8.72□□□□□ -1.01
SHMT2-212ENST00000554467 DLX4Q92988 240 aaPredicted RBP8.72□□□□□ -1.01
SHMT2-212ENST00000554467 FOXC2Q99958 501 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms