RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CCKP06307 115 aa2.1□□□□□ -2.07
SCFD1-211ENST00000554437 IGHV3-30-5P0DP03 117 aa2.1□□□□□ -2.07
SCFD1-211ENST00000554437 MPV17LQ2QL34 196 aa2.1□□□□□ -2.07
SCFD1-211ENST00000554437 C10orf82Q8WW14 230 aa2.1□□□□□ -2.07
SCFD1-211ENST00000554437 ODF3Q96PU9 254 aa2.1□□□□□ -2.07
SCFD1-211ENST00000554437 BAZ1AQ9NRL2 1556 aaPredicted RBP2.1□□□□□ -2.07
SCFD1-211ENST00000554437 FREM3P0C091 2139 aa2.09□□□□□ -2.07
SCFD1-211ENST00000554437 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
SCFD1-211ENST00000554437 GNGT2O14610 69 aa2.09□□□□□ -2.07
SCFD1-211ENST00000554437 DNAL4O96015 105 aa2.09□□□□□ -2.07
SCFD1-211ENST00000554437 CCL8P80075 99 aa2.09□□□□□ -2.07
SCFD1-211ENST00000554437 Q6ZRN7 208 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-211ENST00000554437 MYOZ3Q8TDC0 251 aa2.09□□□□□ -2.07
SCFD1-211ENST00000554437 WFDC10AQ9H1F0 79 aa2.09□□□□□ -2.07
SCFD1-211ENST00000554437 TMEM14CQ9P0S9 112 aa2.09□□□□□ -2.07
SCFD1-211ENST00000554437 MUC4Q99102 2169 aa2.09□□□□□ -2.08
SCFD1-211ENST00000554437 SCAPERQ9BY12 1400 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 DIDO1Q9BTC0 2240 aaKnown RBP2.08□□□□□ -2.08
SCFD1-211ENST00000554437 IGKV3-7A0A075B6H7 116 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 IGLV3-32A0A0A0MS00 114 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 IGLC1P0CG04 106 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 PDE6GP18545 87 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 SPRNQ5BIV9 151 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 ROBO1Q9Y6N7 1651 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 ABCC5O15440 1437 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 CASKIN1Q8WXD9 1431 aa2.08□□□□□ -2.08
SCFD1-211ENST00000554437 LTBP2Q14767 1821 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 CCDC18Q5T9S5 1454 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 MICAL3Q7RTP6 2002 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 TRAV23DV6A0A075B6W5 121 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 IGLV3-1P01715 115 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 GNG11P61952 73 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 Q0VG73 95 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 C15orf53Q8NAA6 179 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 CYP4F30PQ9H0H9 118 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 PRO1933Q9H354 126 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 ANKRD26Q9UPS8 1709 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 GAPVD1Q14C86 1478 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 MAGI1Q96QZ7 1491 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-211ENST00000554437 MCM3APO60318 1980 aa2.07□□□□□ -2.08
SCFD1-211ENST00000554437 NUMA1Q14980 2115 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 CC2D2AQ9P2K1 1620 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 MYO9BQ13459 2157 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 ANK1P16157 1881 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 TRPM7Q96QT4 1865 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 PLXNA4Q9HCM2 1894 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 NAP1L6A6NFF2 107 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 HIGD1CA8MV81 97 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 INE1O15225 51 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 SIX6O95475 246 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 KRTDAPP60985 99 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 PYY3Q5JQD4 70 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 LINC00322Q6ZN03 302 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-211ENST00000554437 ZNF818PQ6ZRF7 136 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 CYP2G1PQ6ZSU1 146 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 PMCHL2Q9BQD1 86 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 LINC00474Q9P2X8 69 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 SNURFQ9Y675 71 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 FBN1P35555 2871 aaKnown RBP2.06□□□□□ -2.08
SCFD1-211ENST00000554437 MED14O60244 1454 aa2.06□□□□□ -2.08
SCFD1-211ENST00000554437 PRDM2Q13029 1718 aa2.05□□□□□ -2.08
SCFD1-211ENST00000554437 EML5Q05BV3 1969 aa2.05□□□□□ -2.08
SCFD1-211ENST00000554437 TRGV2A0A075B6R0 118 aa2.05□□□□□ -2.08
SCFD1-211ENST00000554437 hADV29S1A0JD25 119 aa2.05□□□□□ -2.08
SCFD1-211ENST00000554437 M0R2N4 97 aa2.05□□□□□ -2.08
SCFD1-211ENST00000554437 MRPS14O60783 128 aaKnown RBP2.05□□□□□ -2.08
SCFD1-211ENST00000554437 CITO14578 2027 aa2.04□□□□□ -2.08
SCFD1-211ENST00000554437 KDM6BO15054 1643 aa2.04□□□□□ -2.08
SCFD1-211ENST00000554437 ASIPP42127 132 aa2.04□□□□□ -2.08
SCFD1-211ENST00000554437 UBE2D1P51668 147 aa2.04□□□□□ -2.08
SCFD1-211ENST00000554437 RP1P56715 2156 aa2.04□□□□□ -2.08
SCFD1-211ENST00000554437 SPATA45Q537H7 98 aa2.04□□□□□ -2.08
SCFD1-211ENST00000554437 MED9Q9NWA0 146 aa2.04□□□□□ -2.08
SCFD1-211ENST00000554437 KIAA1551Q9HCM1 1747 aa2.03□□□□□ -2.08
SCFD1-211ENST00000554437 CDK12Q9NYV4 1490 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-211ENST00000554437 ANKRD36BQ8N2N9 1353 aa2.03□□□□□ -2.08
SCFD1-211ENST00000554437 TRBV7-1A0A0A6YYK4 115 aa2.03□□□□□ -2.08
SCFD1-211ENST00000554437 TEX49A0A1B0GTD5 131 aa2.03□□□□□ -2.08
SCFD1-211ENST00000554437 LCN9Q8WX39 176 aa2.03□□□□□ -2.08
SCFD1-211ENST00000554437 AMELYQ99218 206 aa2.03□□□□□ -2.08
SCFD1-211ENST00000554437 NPVFQ9HCQ7 196 aa2.03□□□□□ -2.08
SCFD1-211ENST00000554437 BET1LQ9NYM9 111 aa2.03□□□□□ -2.08
SCFD1-211ENST00000554437 LAMB1P07942 1786 aa2.03□□□□□ -2.09
SCFD1-211ENST00000554437 GOLGA3Q08378 1498 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 PLEKHH2Q8IVE3 1493 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 LOC110117498A0A087WWA1 95 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 CRYM-AS1A6NIL9 109 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 ATOX1O00244 68 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 RPL37AP61513 92 aaKnown RBP2.02□□□□□ -2.09
SCFD1-211ENST00000554437 SEC11AP67812 179 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 C10orf128Q5T292 105 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 ZNF625Q96I27 306 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-211ENST00000554437 PLXNA2O75051 1894 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 MUC22E2RYF6 1773 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-211ENST00000554437 MPDZO75970 2070 aa2.02□□□□□ -2.09
SCFD1-211ENST00000554437 PTPRFP10586 1907 aa2.01□□□□□ -2.09
SCFD1-211ENST00000554437 ARAP2Q8WZ64 1704 aa2.01□□□□□ -2.09
SCFD1-211ENST00000554437 LOC101927531A0A1B0GV80 90 aa2.01□□□□□ -2.09
SCFD1-211ENST00000554437 GYPAP02724 150 aa2.01□□□□□ -2.09
SCFD1-211ENST00000554437 IL9P15248 144 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms