RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 CCL20P78556 96 aa11.94□□□□□ -0.5
FOXN3-204ENST00000553840 FAM74A4Q5TZK3 123 aa11.94□□□□□ -0.5
FOXN3-204ENST00000553840 Q6ZSN1 163 aa11.94□□□□□ -0.5
FOXN3-204ENST00000553840 JPT2Q9H910 190 aa11.94□□□□□ -0.5
FOXN3-204ENST00000553840 A0A087WWC5 75 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 TRAV1-1A0A0B4J248 108 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 IGHV3-30P01768 117 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 IGHV3-30-5P0DP03 117 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 ZFP82Q8N141 532 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 SAMD10Q9BYL1 202 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 GNG13Q9P2W3 67 aa11.93□□□□□ -0.5
FOXN3-204ENST00000553840 M0R381 172 aa11.92□□□□□ -0.5
FOXN3-204ENST00000553840 UFSP1Q6NVU6 142 aa11.92□□□□□ -0.5
FOXN3-204ENST00000553840 SCRT2Q9NQ03 307 aa11.92□□□□□ -0.5
FOXN3-204ENST00000553840 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
FOXN3-204ENST00000553840 BAGE2Q86Y30 109 aa11.91□□□□□ -0.5
FOXN3-204ENST00000553840 Q8N1X5 172 aa11.91□□□□□ -0.5
FOXN3-204ENST00000553840 Q9HAA7 133 aa11.91□□□□□ -0.5
FOXN3-204ENST00000553840 A0A087WWL8 130 aa11.9□□□□□ -0.5
FOXN3-204ENST00000553840 LINC00694P0DN24 101 aa11.9□□□□□ -0.5
FOXN3-204ENST00000553840 LAGE3Q14657 143 aa11.9□□□□□ -0.5
FOXN3-204ENST00000553840 C14orf178Q8N769 122 aaPredicted RBP11.9□□□□□ -0.5
FOXN3-204ENST00000553840 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
FOXN3-204ENST00000553840 KRTAP4-5Q9BYR2 181 aa11.9□□□□□ -0.5
FOXN3-204ENST00000553840 MANBALQ9NQG1 85 aa11.9□□□□□ -0.5
FOXN3-204ENST00000553840 FUSP35637 526 aaKnown RBP eCLIP11.89□□□□□ -0.513e-8■□□□□ 10.9
FOXN3-204ENST00000553840 BLOC1S1P78537 153 aa11.89□□□□□ -0.51
FOXN3-204ENST00000553840 TOR2AQ5JU69 321 aa11.89□□□□□ -0.51
FOXN3-204ENST00000553840 URGCP-MRPS24S4R325 110 aa11.89□□□□□ -0.51
FOXN3-204ENST00000553840 IFNA1P01562 189 aa11.88□□□□□ -0.51
FOXN3-204ENST00000553840 CXCL1P09341 107 aa11.88□□□□□ -0.51
FOXN3-204ENST00000553840 MLST8Q9BVC4 326 aa11.88□□□□□ -0.51
FOXN3-204ENST00000553840 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
FOXN3-204ENST00000553840 TRBV10-1A0A0K0K1A3 114 aa11.87□□□□□ -0.51
FOXN3-204ENST00000553840 RPL36AP83881 106 aaKnown RBP11.87□□□□□ -0.51
FOXN3-204ENST00000553840 PRR27Q6MZM9 219 aa11.87□□□□□ -0.51
FOXN3-204ENST00000553840 NTN5Q8WTR8 489 aaPredicted RBP11.87□□□□□ -0.51
FOXN3-204ENST00000553840 RPL36ALQ969Q0 106 aaKnown RBP11.87□□□□□ -0.51
FOXN3-204ENST00000553840 GCSHP23434 173 aa11.86□□□□□ -0.51
FOXN3-204ENST00000553840 Q9UF83 564 aa11.86□□□□□ -0.51
FOXN3-204ENST00000553840 PCLOQ9Y6V0 5065 aa11.86□□□□□ -0.51
FOXN3-204ENST00000553840 IGLV5-52A0A0A0MRZ9 124 aa11.85□□□□□ -0.51
FOXN3-204ENST00000553840 RPL35P42766 123 aaKnown RBP11.85□□□□□ -0.51
FOXN3-204ENST00000553840 RPL19P84098 196 aaKnown RBP11.85□□□□□ -0.51
FOXN3-204ENST00000553840 SPANXN1Q5VSR9 72 aa11.85□□□□□ -0.51
FOXN3-204ENST00000553840 KCNIP4Q6PIL6 250 aa11.85□□□□□ -0.51
FOXN3-204ENST00000553840 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.85□□□□□ -0.51
FOXN3-204ENST00000553840 RYR1P21817 5038 aa11.85□□□□□ -0.51
FOXN3-204ENST00000553840 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
FOXN3-204ENST00000553840 LRCOL1A6NCL2 159 aa11.84□□□□□ -0.51
FOXN3-204ENST00000553840 BCL2P10415 239 aa11.84□□□□□ -0.51
FOXN3-204ENST00000553840 RAB4BP61018 213 aa11.84□□□□□ -0.51
FOXN3-204ENST00000553840 ZNF56Q15929 161 aa11.84□□□□□ -0.51
FOXN3-204ENST00000553840 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
FOXN3-204ENST00000553840 SNAI2O43623 268 aa11.83□□□□□ -0.52
FOXN3-204ENST00000553840 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
FOXN3-204ENST00000553840 MEF2BQ02080 365 aaPredicted RBP11.83□□□□□ -0.52
FOXN3-204ENST00000553840 DAZ4Q86SG3 579 aaKnown RBP11.83□□□□□ -0.52
FOXN3-204ENST00000553840 Q8N814 137 aa11.83□□□□□ -0.52
FOXN3-204ENST00000553840 OR10AG1Q8NH19 301 aa11.83□□□□□ -0.52
FOXN3-204ENST00000553840 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
FOXN3-204ENST00000553840 RMI2Q96E14 147 aa11.83□□□□□ -0.52
FOXN3-204ENST00000553840 DAZAP1Q96EP5 407 aaKnown RBP11.83□□□□□ -0.52
FOXN3-204ENST00000553840 SSBP4Q9BWG4 385 aaPredicted RBP11.83□□□□□ -0.52
FOXN3-204ENST00000553840 DAZ3Q9NR90 486 aaKnown RBP11.83□□□□□ -0.52
FOXN3-204ENST00000553840 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
FOXN3-204ENST00000553840 LRP1BQ9NZR2 4599 aa11.82□□□□□ -0.52
FOXN3-204ENST00000553840 SMIM17P0DL12 118 aa11.82□□□□□ -0.52
FOXN3-204ENST00000553840 KRTAP10-1P60331 282 aa11.82□□□□□ -0.52
FOXN3-204ENST00000553840 ELOBQ15370 118 aa11.82□□□□□ -0.52
FOXN3-204ENST00000553840 TEX261Q6UWH6 196 aa11.82□□□□□ -0.52
FOXN3-204ENST00000553840 Q8N3U1 123 aa11.82□□□□□ -0.52
FOXN3-204ENST00000553840 HSPG2P98160 4391 aa11.82□□□□□ -0.52
FOXN3-204ENST00000553840 A0A087WX48 190 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 EPM2AB3EWF7 344 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 F5H697 171 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 PDE6DO43924 150 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
FOXN3-204ENST00000553840 UBE2D3P61077 147 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 UBE2D2P62837 147 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 NIT1Q86X76 327 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 OR10G8Q8NGN5 311 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 CHCHD7Q9BUK0 85 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 DERL1Q9BUN8 251 aa11.81□□□□□ -0.52
FOXN3-204ENST00000553840 RPS20P60866 119 aaKnown RBP11.8□□□□□ -0.52
FOXN3-204ENST00000553840 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
FOXN3-204ENST00000553840 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
FOXN3-204ENST00000553840 SMIM12Q96EX1 92 aa11.8□□□□□ -0.52
FOXN3-204ENST00000553840 MED9Q9NWA0 146 aa11.8□□□□□ -0.52
FOXN3-204ENST00000553840 MUC21A0A0G2JKD1 596 aa11.79□□□□□ -0.52
FOXN3-204ENST00000553840 MUC21A0A140T8X8 626 aa11.79□□□□□ -0.52
FOXN3-204ENST00000553840 RBFOX3A6NFN3 312 aa11.79□□□□□ -0.52
FOXN3-204ENST00000553840 GNG4P50150 75 aa11.79□□□□□ -0.52
FOXN3-204ENST00000553840 XGP55808 180 aa11.79□□□□□ -0.52
FOXN3-204ENST00000553840 SSTP61278 116 aa11.79□□□□□ -0.52
FOXN3-204ENST00000553840 AP1S3Q96PC3 154 aa11.79□□□□□ -0.52
FOXN3-204ENST00000553840 FRZBQ92765 325 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms