RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 TRAV40A0A0B4J280 105 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 UMAD1C9J7I0 102 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 NDUFC1O43677 76 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 IGKV2D-28P01615 120 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 DEFA4P12838 97 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 FXYD2P54710 66 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 ROMO1P60602 79 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 UBE2G1P62253 170 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 ELOBQ15370 118 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 C1orf134Q5TEV5 83 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 RPL7L1Q6DKI1 246 aaKnown RBP2.22□□□□□ -2.05
TDP1-207ENST00000553617 LYZL1Q6UWQ5 148 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 MED12LQ86YW9 2145 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 RPRMLQ8N4K4 120 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 MUC7Q8TAX7 377 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 PTPRSQ13332 1948 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 GREB1Q4ZG55 1949 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 CFAP74Q9C0B2 1584 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 MUC4Q99102 2169 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 TET3O43151 1660 aa2.22□□□□□ -2.05
TDP1-207ENST00000553617 PCNX2A6NKB5 2137 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 TOP2BQ02880 1626 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 TARBP1Q13395 1621 aaKnown RBP2.21□□□□□ -2.06
TDP1-207ENST00000553617 LAMB4A4D0S4 1761 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 TRBV10-2A0A0K0K1G8 114 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 A6NIN4 97 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 C17orf98A8MV24 154 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 CRPP02741 224 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 ASAH2BP0C7U1 165 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 SMIM13P0DJ93 91 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 SNRPFP62306 86 aaKnown RBP2.21□□□□□ -2.06
TDP1-207ENST00000553617 CACNA1DQ01668 2161 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 ZNF117Q03924 483 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 KPRPQ5T749 579 aaPredicted RBP2.21□□□□□ -2.06
TDP1-207ENST00000553617 Q6ZQT0 140 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 DOCK2Q92608 1830 aa2.21□□□□□ -2.06
TDP1-207ENST00000553617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.21□□□□□ -2.06
TDP1-207ENST00000553617 MAP3K4Q9Y6R4 1608 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 NKTRP30414 1462 aaKnown RBP2.2□□□□□ -2.06
TDP1-207ENST00000553617 PLXNA2O75051 1894 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 IGKV1D-37A0A075B6S9 117 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 C5orf67F2Z3F1 127 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 H3BPC8 53 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 H7C2G1 150 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 MGST1P10620 155 aaKnown RBP2.2□□□□□ -2.06
TDP1-207ENST00000553617 ZNF22P17026 224 aaPredicted RBP2.2□□□□□ -2.06
TDP1-207ENST00000553617 IGFBP7Q16270 282 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 FAM27BQ5VT28 67 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 CFAP126Q5VTH2 177 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 SPTSSBQ8NFR3 76 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 CMTM2Q8TAZ6 248 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 ODF3Q96PU9 254 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 CYSTM1Q9H1C7 97 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 HIGD1BQ9P298 99 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 ABCC1P33527 1531 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 URB2Q14146 1524 aaKnown RBP2.2□□□□□ -2.06
TDP1-207ENST00000553617 EFCAB6Q5THR3 1501 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 A0A1B0GUL6 1792 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 NYNRINQ9P2P1 1898 aaKnown RBP2.2□□□□□ -2.06
TDP1-207ENST00000553617 IQSEC2Q5JU85 1478 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 LRRC9Q6ZRR7 1453 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 COL24A1Q17RW2 1714 aa2.2□□□□□ -2.06
TDP1-207ENST00000553617 ABCC8Q09428 1581 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 EHBP1L1Q8N3D4 1523 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 TRAV13-2A0A0B4J235 113 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 TCRBV4S1A1TA0A5B7 111 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 F2Z2F3 143 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 CLPSP04118 112 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 IGKV3-11P04433 115 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 ACYP1P07311 99 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 CXCL8P10145 99 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 NNATQ16517 81 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 CASC2Q6XLA1 102 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 CYP2G1PQ6ZSU1 146 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 LINC01600Q96MT4 127 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 C14orf132Q9NPU4 83 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 CASP8AP2Q9UKL3 1982 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 SHANK3Q9BYB0 1731 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 NWD2Q9ULI1 1742 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 CDK12Q9NYV4 1490 aaPredicted RBP2.19□□□□□ -2.06
TDP1-207ENST00000553617 LCTP09848 1927 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 IQGAP2Q13576 1575 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 DIP2CQ9Y2E4 1556 aa2.19□□□□□ -2.06
TDP1-207ENST00000553617 KIF1AQ12756 1690 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 CFAP43Q8NDM7 1665 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 ITSN2Q9NZM3 1697 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 HMGXB3Q12766 1538 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 C11orf86A6NJI1 115 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 H3BQ85 93 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 PRB2P02812 416 aaPredicted RBP2.18□□□□□ -2.06
TDP1-207ENST00000553617 IGLV7-43P04211 117 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 PRB4P10163 310 aaPredicted RBP2.18□□□□□ -2.06
TDP1-207ENST00000553617 EFNA4P52798 201 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 SMIM11AP58511 58 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 C9orf116Q5BN46 136 aaPredicted RBP2.18□□□□□ -2.06
TDP1-207ENST00000553617 SLC48A1Q6P1K1 146 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 LYPD5Q6UWN5 251 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 LINC00643Q86TS7 51 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 CYP4F30PQ9H0H9 118 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 FAM215AQ9Y5M1 114 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms