RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 LINC00271P0C7V0 271 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 STRCQ7RTU9 1775 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 TMEM223A0PJW6 202 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 CXCL10P02778 98 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 KLK9Q9UKQ9 250 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 TRGV8A0A0C4DH27 118 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 IGHV4-28A0A0C4DH34 117 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 IGHV3-53P01767 116 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 ORMDL1Q9P0S3 153 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 COL11A2P13942 1736 aaPredicted RBP6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 APC2O95996 2303 aa6.91□□□□□ -1.3
GTF2A1-203ENST00000553612 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.3
GTF2A1-203ENST00000553612 CLPSL1A2RUU4 121 aa6.9□□□□□ -1.3
GTF2A1-203ENST00000553612 GAS8-AS1O95177 125 aa6.9□□□□□ -1.3
GTF2A1-203ENST00000553612 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
GTF2A1-203ENST00000553612 ADAMTS7Q9UKP4 1686 aa6.9□□□□□ -1.3
GTF2A1-203ENST00000553612 DKK1O94907 266 aa6.9□□□□□ -1.3
GTF2A1-203ENST00000553612 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.31
GTF2A1-203ENST00000553612 LECT2O14960 151 aa6.9□□□□□ -1.31
GTF2A1-203ENST00000553612 LY6EQ16553 131 aa6.9□□□□□ -1.31
GTF2A1-203ENST00000553612 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.31
GTF2A1-203ENST00000553612 A0A0G2JNJ9 132 aa6.9□□□□□ -1.31
GTF2A1-203ENST00000553612 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.31
GTF2A1-203ENST00000553612 Q9UFV3 132 aa6.9□□□□□ -1.31
GTF2A1-203ENST00000553612 MRPS36P82909 103 aaKnown RBP6.89□□□□□ -1.31
GTF2A1-203ENST00000553612 MIFP14174 115 aa6.89□□□□□ -1.31
GTF2A1-203ENST00000553612 TTTY12Q9BZ98 90 aa6.89□□□□□ -1.31
GTF2A1-203ENST00000553612 UBE2D1P51668 147 aa6.89□□□□□ -1.31
GTF2A1-203ENST00000553612 FAM19A1Q7Z5A9 133 aa6.89□□□□□ -1.31
GTF2A1-203ENST00000553612 LMO7DNF2Z398 122 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 MRPS21P82921 87 aaKnown RBP6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 Q9UF83 564 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 A0A0J9YXV3 536 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 CCKP06307 115 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 DCANP1Q8TF63 244 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 VCYO14598 125 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 CLPSP04118 112 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 A0A096LNJ9 63 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 PRR15LQ9BU68 103 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 INSP01308 110 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 ZNF134P52741 427 aa6.88□□□□□ -1.31
GTF2A1-203ENST00000553612 PTPRZ1P23471 2315 aaPredicted RBP6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 RBM12B-AS1Q9P1G2 102 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 LST1O00453 97 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 UBE2AP49459 152 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 SMCR5Q8TEV8 140 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 BUB1B-PAK6H3BSN5 160 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 NEXN-AS1Q8NBZ9 246 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 IGKV1OR2-108A0A075B7D4 117 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 IGLV3-21P80748 117 aaPredicted RBP6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 EBI3Q14213 229 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 FAM167A-AS1Q96KT0 104 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 KIAA1671Q9BY89 1806 aa6.87□□□□□ -1.31
GTF2A1-203ENST00000553612 C11orf53Q8IXP5 236 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 UBE2E2Q96LR5 201 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 ARHGAP32A7KAX9 2087 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 LYNX1G3V0Z9 82 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 LYNX1P0DP58 116 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 Q6ZPA2 131 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 CACNA1GO43497 2377 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 SDHAF1A6NFY7 115 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 CACNA1EQ15878 2313 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 Q6JHZ5 121 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 FLVCR1-AS1Q8TAF5 88 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 CYSTM1Q9H1C7 97 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 TCF20Q9UGU0 1960 aaKnown RBP6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 SHANK3Q9BYB0 1731 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 OXTP01178 125 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 DEFB109BQ30KR1 87 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 PATE2Q6UY27 113 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 Q6ZS49 121 aa6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 ZNF706Q9Y5V0 76 aaPredicted RBP6.86□□□□□ -1.31
GTF2A1-203ENST00000553612 C17orf100A8MU93 164 aa6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 GNRH2O43555 120 aa6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 SP5Q6BEB4 398 aaPredicted RBP6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 A0A0J9YXY3 114 aa6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 Q9H8V8 135 aa6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 WT1-ASQ06250 92 aa6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 TOMM6Q96B49 74 aa6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 DEFB1P60022 68 aa6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 ATP1A1-AS1Q5TC04 95 aa6.85□□□□□ -1.31
GTF2A1-203ENST00000553612 USF3Q68DE3 2245 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 IGKV2-29A2NJV5 120 aaPredicted RBP6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 C5orf67F2Z3F1 127 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 ESRGQ1W209 222 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 PVRIGQ6DKI7 326 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 TMEM14BQ9NUH8 114 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 FAM222AQ5U5X8 452 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 BPESC1Q9GZL8 116 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 NDUFC1O43677 76 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 CTSZQ9UBR2 303 aa6.84□□□□□ -1.31
GTF2A1-203ENST00000553612 IGHV1-69DA0A0B4J2H0 117 aa6.84□□□□□ -1.32
GTF2A1-203ENST00000553612 IGLV2-14P01704 120 aa6.84□□□□□ -1.32
GTF2A1-203ENST00000553612 IGHV1-69P01742 117 aa6.84□□□□□ -1.32
GTF2A1-203ENST00000553612 NDUFS5O43920 106 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms