RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 SH2D6Q7Z4S9 175 aa6.95□□□□□ -1.3
LINC00517-201ENST00000553396 SCRT2Q9NQ03 307 aa6.95□□□□□ -1.3
LINC00517-201ENST00000553396 TNFRSF18Q9Y5U5 241 aa6.95□□□□□ -1.3
LINC00517-201ENST00000553396 MUC21A0A0G2JKD1 596 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 MUC21A0A140T8X8 626 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 RAB19A4D1S5 217 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 GAGE12JA6NER3 117 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 RHODO00212 210 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 GAGE1Q13065 139 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 GAGE4Q13068 117 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 GAGE5Q13069 117 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 GAGE13Q4V321 117 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 OR10J3Q5JRS4 329 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 UFSP1Q6NVU6 142 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 ZFP82Q8N141 532 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 C14orf178Q8N769 122 aaPredicted RBP6.94□□□□□ -1.3
LINC00517-201ENST00000553396 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 ATP6V0E2Q8NHE4 81 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 MED9Q9NWA0 146 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 Q9UF83 564 aa6.94□□□□□ -1.3
LINC00517-201ENST00000553396 PDE6DO43924 150 aa6.93□□□□□ -1.3
LINC00517-201ENST00000553396 DNAH10OSP0CZ25 163 aa6.93□□□□□ -1.3
LINC00517-201ENST00000553396 MED14OSP0DP75 135 aa6.93□□□□□ -1.3
LINC00517-201ENST00000553396 EVI2AP22794 236 aa6.93□□□□□ -1.3
LINC00517-201ENST00000553396 GNG4P50150 75 aa6.93□□□□□ -1.3
LINC00517-201ENST00000553396 SSTP61278 116 aa6.93□□□□□ -1.3
LINC00517-201ENST00000553396 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
LINC00517-201ENST00000553396 VAX2Q9UIW0 290 aa6.93□□□□□ -1.3
LINC00517-201ENST00000553396 TRBV20OR9-2A0A075B6H5 130 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 TRAV9-2A0A087WT02 112 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 TRAV8-6A0A0B4J262 113 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 IGHV3-38A0A0C4DH36 116 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 C16orf90A8MZG2 172 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 CRYGDP07320 174 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 LINC00694P0DN24 101 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 GZMBP10144 247 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 BTF3P20290 206 aaKnown RBP6.92□□□□□ -1.3
LINC00517-201ENST00000553396 TIRAPP58753 221 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 Q6ZRN7 208 aaPredicted RBP6.92□□□□□ -1.3
LINC00517-201ENST00000553396 GTSF1LQ9H1H1 148 aa6.92□□□□□ -1.3
LINC00517-201ENST00000553396 SNAI2O43623 268 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 CXCL1P09341 107 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 ZNF56Q15929 161 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 LELP1Q5T871 98 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 SPANXN1Q5VSR9 72 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 SPATA12Q7Z6I5 190 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 OR2D3Q8NGH3 330 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 DAZAP1Q96EP5 407 aaKnown RBP6.91□□□□□ -1.3
LINC00517-201ENST00000553396 TPPP3Q9BW30 176 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 MSRB1Q9NZV6 116 aa6.91□□□□□ -1.3
LINC00517-201ENST00000553396 HERC2O95714 4834 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 RBFOX3A6NFN3 312 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 IGHV3-33P01772 117 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 OR5AL1P0C617 328 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 TAGLN2P37802 199 aaKnown RBP6.9□□□□□ -1.3
LINC00517-201ENST00000553396 BLOC1S1P78537 153 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 LINC01556Q5JQF7 62 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 C10orf126Q8N4M7 172 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 SMIM12Q96EX1 92 aa6.9□□□□□ -1.3
LINC00517-201ENST00000553396 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
LINC00517-201ENST00000553396 C19orf71A6NCJ1 209 aa6.89□□□□□ -1.31
LINC00517-201ENST00000553396 P01737 135 aa6.89□□□□□ -1.31
LINC00517-201ENST00000553396 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
LINC00517-201ENST00000553396 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
LINC00517-201ENST00000553396 FER1L6-AS1Q8NA97 138 aa6.89□□□□□ -1.31
LINC00517-201ENST00000553396 Q9HAA7 133 aa6.89□□□□□ -1.31
LINC00517-201ENST00000553396 F5H697 171 aa6.88□□□□□ -1.31
LINC00517-201ENST00000553396 K7EP13 123 aa6.88□□□□□ -1.31
LINC00517-201ENST00000553396 IGLC6P0CF74 106 aa6.88□□□□□ -1.31
LINC00517-201ENST00000553396 FUSP35637 526 aaKnown RBP eCLIP6.88□□□□□ -1.31
LINC00517-201ENST00000553396 CEBPGP53567 150 aa6.88□□□□□ -1.31
LINC00517-201ENST00000553396 ERVFC1-1P60608 527 aa6.88□□□□□ -1.31
LINC00517-201ENST00000553396 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
LINC00517-201ENST00000553396 RPL36AP83881 106 aaKnown RBP6.88□□□□□ -1.31
LINC00517-201ENST00000553396 TOR2AQ5JU69 321 aa6.88□□□□□ -1.31
LINC00517-201ENST00000553396 RPL36ALQ969Q0 106 aaKnown RBP6.88□□□□□ -1.31
LINC00517-201ENST00000553396 AP1S3Q96PC3 154 aa6.88□□□□□ -1.31
LINC00517-201ENST00000553396 K7EN84 100 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 MGPP08493 103 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 SMIM17P0DL12 118 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 RAB4BP61018 213 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 LYPD6BQ8NI32 183 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 OCC1Q8TAD7 63 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 KRTAP4-12Q9BQ66 201 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 BIN3Q9NQY0 253 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 LRP1BQ9NZR2 4599 aa6.87□□□□□ -1.31
LINC00517-201ENST00000553396 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 A0A087WWC5 75 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 TRBV10-1A0A0K0K1A3 114 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 XKRY2A2RUG3 117 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 IBA57-AS1B1ANH7 110 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 TMEM250H0YL14 139 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 EREGO14944 169 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 PSCAO43653 123 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 UBE2D3P61077 147 aa6.86□□□□□ -1.31
LINC00517-201ENST00000553396 UBE2D2P62837 147 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms