RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 IGKV2D-40P01614 121 aaPredicted RBP2.21□□□□□ -2.06
ATXN3-217ENST00000553287 CD3DP04234 171 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 PRSS3P35030 304 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 RCVRNP35243 200 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 ATP5IP56385 69 aaPredicted RBP2.21□□□□□ -2.06
ATXN3-217ENST00000553287 TAS2R46P59540 309 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 SCGB2B2Q4G0G5 96 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 LYZL2Q7Z4W2 148 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 Q8TAT8 98 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 GLYATL2Q8WU03 294 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 ARL6Q9H0F7 186 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 COPZ2Q9P299 210 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 HIGD1AQ9Y241 93 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 TPRKBQ9Y3C4 175 aa2.21□□□□□ -2.06
ATXN3-217ENST00000553287 C9JCJ5 164 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 K7EP13 123 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 WRBO00258 174 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 GNRH2O43555 120 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 PITX3O75364 302 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 HYPMO75409 117 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 CDS2O95674 445 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 IL5P05113 134 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 OR4E1P0C645 316 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 SULT1A3P0DMM9 295 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 SULT1A4P0DMN0 295 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 GPX4P36969 197 aaPredicted RBP2.2□□□□□ -2.06
ATXN3-217ENST00000553287 RANBP1P43487 201 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 AQP4P55087 323 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 RRAS2P62070 204 aaPredicted RBP2.2□□□□□ -2.06
ATXN3-217ENST00000553287 LSM3P62310 102 aaKnown RBP2.2□□□□□ -2.06
ATXN3-217ENST00000553287 AKR1C1Q04828 323 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 SAMD13Q5VXD3 122 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 CYP2G1PQ6ZSU1 146 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 LHFPL1Q86WI0 220 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 EXOC3-AS1Q8N2X6 119 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 SLC25A29Q8N8R3 303 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 ZNF680Q8NEM1 530 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 BPIFCQ8NFQ6 507 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 LYPD6BQ8NI32 183 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 GPX8Q8TED1 209 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 RAB2BQ8WUD1 216 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 S100A16Q96FQ6 103 aaKnown RBP2.2□□□□□ -2.06
ATXN3-217ENST00000553287 DPH3Q96FX2 82 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 C20orf144Q9BQM9 153 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 TXNDC17Q9BRA2 123 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 AGPAT4-IT1Q9H0P7 198 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 TMEM222Q9H0R3 208 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 NAA60Q9H7X0 242 aa2.2□□□□□ -2.06
ATXN3-217ENST00000553287 A0A0A6YYH2 397 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 A0A0D9SG52 128 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 A6NJ64 397 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 HPGDSO60760 199 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 MPDU1O75352 247 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 ATP5HO75947 161 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 HLA-DQA1P01909 254 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 ORM1P02763 201 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 SLC25A5P05141 298 aaKnown RBP2.19□□□□□ -2.06
ATXN3-217ENST00000553287 FABP1P07148 127 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 GPX1P07203 203 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 STAG3L3P0CL85 134 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 RPL7P18124 248 aaKnown RBP2.19□□□□□ -2.06
ATXN3-217ENST00000553287 SLC38A11Q08AI6 406 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 UBE2NLQ5JXB2 153 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 SPANXN5Q5MJ07 72 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 DPPA3Q6W0C5 159 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 SDIM1Q6ZPB5 146 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 LINC00305Q7Z4B0 112 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 ZFAND2AQ8N6M9 145 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 PACRGLQ8N7B6 248 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 OR4C5Q8NGB2 326 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 OR1S1Q8NH92 325 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 ATP6V0E2Q8NHE4 81 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 UBE2WQ96B02 151 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 FAM19A4Q96LR4 140 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 CNBD2Q96M20 576 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 GPR82Q96P67 336 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 ARV1Q9H2C2 271 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 COMMD3Q9UBI1 195 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 NAGKQ9UJ70 344 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 SSR3Q9UNL2 185 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 KCNIP3Q9Y2W7 256 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 U3KQ87 197 aa2.19□□□□□ -2.06
ATXN3-217ENST00000553287 TRAV8-3A0A0A6YYJ7 113 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 A0A0U1RQV1 116 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 FAM240BA0A1B0GVZ2 78 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 GGTLC3B5MD39 225 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 ANKRD65E5RJM6 399 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 TNFAIP8O95379 198 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 PYYP10082 97 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 SEC61GP60059 68 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 UBE2MP61081 183 aaKnown RBP2.18□□□□□ -2.06
ATXN3-217ENST00000553287 PRR3P79522 188 aaKnown RBP2.18□□□□□ -2.06
ATXN3-217ENST00000553287 SMCO1Q147U7 214 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 RNASE10Q5GAN6 216 aaKnown RBP2.18□□□□□ -2.06
ATXN3-217ENST00000553287 IBA57Q5T440 356 aaKnown RBP2.18□□□□□ -2.06
ATXN3-217ENST00000553287 CLPSL2Q6UWE3 100 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 LCN15Q6UWW0 184 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 NTM-AS1Q6ZSK4 140 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 ZC2HC1AQ96GY0 325 aa2.18□□□□□ -2.06
ATXN3-217ENST00000553287 SAMD10Q9BYL1 202 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms