RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 ANXA2RQ3ZCQ2 193 aa13.89□□□□□ -0.19
LRP1-204ENST00000553277 ANKRD39Q53RE8 183 aa13.89□□□□□ -0.19
LRP1-204ENST00000553277 Q6ZQT7 251 aa13.89□□□□□ -0.19
LRP1-204ENST00000553277 C2orf91Q6ZV80 131 aa13.89□□□□□ -0.19
LRP1-204ENST00000553277 STAB1Q9NY15 2570 aa13.89□□□□□ -0.19
LRP1-204ENST00000553277 S100A4P26447 101 aaKnown RBP13.88□□□□□ -0.19
LRP1-204ENST00000553277 ODF1Q14990 250 aa13.88□□□□□ -0.19
LRP1-204ENST00000553277 PHLDA3Q9Y5J5 127 aa13.88□□□□□ -0.19
LRP1-204ENST00000553277 NPSP0C0P6 89 aa13.88□□□□□ -0.19
LRP1-204ENST00000553277 RNASE4P34096 147 aaKnown RBP13.88□□□□□ -0.19
LRP1-204ENST00000553277 FXYD7P58549 80 aa13.88□□□□□ -0.19
LRP1-204ENST00000553277 VWFP04275 2813 aa13.88□□□□□ -0.19
LRP1-204ENST00000553277 SMIM17P0DL12 118 aa13.87□□□□□ -0.19
LRP1-204ENST00000553277 LINC00482Q8N8I6 264 aa13.87□□□□□ -0.19
LRP1-204ENST00000553277 SMIM2Q9BVW6 85 aa13.87□□□□□ -0.19
LRP1-204ENST00000553277 SEC11AP67812 179 aa13.86□□□□□ -0.19
LRP1-204ENST00000553277 DEFB114Q30KQ6 69 aa13.86□□□□□ -0.19
LRP1-204ENST00000553277 ORMDL2Q53FV1 153 aa13.86□□□□□ -0.19
LRP1-204ENST00000553277 RNASE3P12724 160 aaKnown RBP13.85□□□□□ -0.19
LRP1-204ENST00000553277 HLA-DRB4P13762 266 aa13.85□□□□□ -0.19
LRP1-204ENST00000553277 RPL32P62910 135 aaKnown RBP13.85□□□□□ -0.19
LRP1-204ENST00000553277 AP1S3Q96PC3 154 aa13.85□□□□□ -0.19
LRP1-204ENST00000553277 HLA-DRB4X5D2U9 266 aa13.85□□□□□ -0.19
LRP1-204ENST00000553277 TRAV2A0A0B4J234 112 aa13.85□□□□□ -0.19
LRP1-204ENST00000553277 DKK2Q9UBU2 259 aa13.85□□□□□ -0.19
LRP1-204ENST00000553277 TRAV25A0A0B4J276 109 aa13.84□□□□□ -0.19
LRP1-204ENST00000553277 F6UB75 175 aa13.84□□□□□ -0.19
LRP1-204ENST00000553277 PRSS1P07477 247 aa13.84□□□□□ -0.19
LRP1-204ENST00000553277 SUMO2P61956 95 aaKnown RBP13.84□□□□□ -0.19
LRP1-204ENST00000553277 UBE2V1Q13404 147 aa13.84□□□□□ -0.19
LRP1-204ENST00000553277 TMEM97Q5BJF2 176 aa13.84□□□□□ -0.19
LRP1-204ENST00000553277 C18orf15Q96N68 181 aa13.84□□□□□ -0.19
LRP1-204ENST00000553277 TP73-AS1Q9UF72 201 aa13.84□□□□□ -0.19
LRP1-204ENST00000553277 HHLA3Q9XRX5 114 aa13.84□□□□□ -0.19
LRP1-204ENST00000553277 TRAV26-2A0A0B4J265 109 aa13.83□□□□□ -0.2
LRP1-204ENST00000553277 DPM2O94777 84 aa13.83□□□□□ -0.2
LRP1-204ENST00000553277 IGKCP01834 107 aa13.83□□□□□ -0.2
LRP1-204ENST00000553277 SNRPD3P62318 126 aaKnown RBP13.83□□□□□ -0.2
LRP1-204ENST00000553277 SHISA2Q6UWI4 295 aa13.83□□□□□ -0.2
LRP1-204ENST00000553277 SORL1Q92673 2214 aa13.83□□□□□ -0.2
LRP1-204ENST00000553277 TRAV12-1A0A0B4J245 112 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 LINC01549A6NIU2 74 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 K7EQG2 157 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 TAX1BP3O14907 124 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 PF4P02776 101 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 RASL10AQ92737 203 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 J3KRW8 73 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 DEFB1P60022 68 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 HSD52Q0P140 79 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 FAM159AQ6UWV7 190 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 TMEM61Q8N0U2 210 aa13.82□□□□□ -0.2
LRP1-204ENST00000553277 GNRH2O43555 120 aa13.81□□□□□ -0.2
LRP1-204ENST00000553277 C3orf56Q8N813 242 aa13.81□□□□□ -0.2
LRP1-204ENST00000553277 WFDC9Q8NEX5 89 aa13.81□□□□□ -0.2
LRP1-204ENST00000553277 HIGD1BQ9P298 99 aa13.81□□□□□ -0.2
LRP1-204ENST00000553277 KIF25-AS1Q9Y6Z4 181 aa13.81□□□□□ -0.2
LRP1-204ENST00000553277 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
LRP1-204ENST00000553277 A0A087WX48 190 aa13.8□□□□□ -0.2
LRP1-204ENST00000553277 A0A0J9YX75 114 aa13.8□□□□□ -0.2
LRP1-204ENST00000553277 C7orf71A4D174 169 aa13.8□□□□□ -0.2
LRP1-204ENST00000553277 IGLV1-51P01701 117 aa13.8□□□□□ -0.2
LRP1-204ENST00000553277 CD300EQ496F6 205 aaPredicted RBP13.8□□□□□ -0.2
LRP1-204ENST00000553277 C14orf178Q8N769 122 aaPredicted RBP13.8□□□□□ -0.2
LRP1-204ENST00000553277 DYNLRB2Q8TF09 96 aa13.8□□□□□ -0.2
LRP1-204ENST00000553277 TOMM6Q96B49 74 aa13.8□□□□□ -0.2
LRP1-204ENST00000553277 IGKV3-7A0A075B6H7 116 aa13.79□□□□□ -0.2
LRP1-204ENST00000553277 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.79□□□□□ -0.2
LRP1-204ENST00000553277 DUSP14O95147 198 aaKnown RBP13.79□□□□□ -0.2
LRP1-204ENST00000553277 PLNP26678 52 aa13.79□□□□□ -0.2
LRP1-204ENST00000553277 WFDC3Q8IUB2 231 aa13.79□□□□□ -0.2
LRP1-204ENST00000553277 SPAG8Q99932 426 aaPredicted RBP13.79□□□□□ -0.2
LRP1-204ENST00000553277 PTTG1IPP53801 180 aa13.79□□□□□ -0.2
LRP1-204ENST00000553277 A6NDN8 102 aa13.78□□□□□ -0.2
LRP1-204ENST00000553277 INSL3P51460 131 aa13.78□□□□□ -0.2
LRP1-204ENST00000553277 LINC00315P59091 139 aa13.78□□□□□ -0.2
LRP1-204ENST00000553277 SELENOKQ9Y6D0 94 aa13.78□□□□□ -0.2
LRP1-204ENST00000553277 TRRAPQ9Y4A5 3859 aa13.77□□□□□ -0.21
LRP1-204ENST00000553277 C9orf85Q96MD7 179 aa13.77□□□□□ -0.21
LRP1-204ENST00000553277 ZNF256Q9Y2P7 627 aaPredicted RBP13.77□□□□□ -0.21
LRP1-204ENST00000553277 CCL25O15444 150 aa13.76□□□□□ -0.21
LRP1-204ENST00000553277 SAP30O75446 220 aa13.76□□□□□ -0.21
LRP1-204ENST00000553277 H7C1H1 209 aa13.75□□□□□ -0.21
LRP1-204ENST00000553277 NMUP48645 174 aa13.75□□□□□ -0.21
LRP1-204ENST00000553277 FOXI2Q6ZQN5 318 aa13.75□□□□□ -0.21
LRP1-204ENST00000553277 WIPF1O43516 503 aa13.75□□□□□ -0.21
LRP1-204ENST00000553277 ZNF688P0C7X2 276 aa13.75□□□□□ -0.21
LRP1-204ENST00000553277 PCP2Q8IVA1 136 aa13.75□□□□□ -0.21
LRP1-204ENST00000553277 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
LRP1-204ENST00000553277 IGHV3-16A0A0C4DH30 117 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 CBY3A6NI87 242 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 F8VRH5 84 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 H3BRM9 83 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 MGPP08493 103 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 CDKN1BP46527 198 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 Q6ZVH6 145 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 SPATA3Q8NHX4 192 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 SCGB3A1Q96QR1 104 aa13.74□□□□□ -0.21
LRP1-204ENST00000553277 TRBV6-5A0A0K0K1A5 114 aa13.73□□□□□ -0.21
LRP1-204ENST00000553277 CD7P09564 240 aa13.73□□□□□ -0.21
LRP1-204ENST00000553277 VAMP3Q15836 100 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms