RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 ARL2-SNX15V9GYD0 113 aa13.91□□□□□ -0.18
SMARCD1-212ENST00000551966 B4DEV8 164 aa13.9□□□□□ -0.18
SMARCD1-212ENST00000551966 USP17L23D6RBM5 183 aa13.9□□□□□ -0.18
SMARCD1-212ENST00000551966 PET100P0DJ07 73 aa13.9□□□□□ -0.18
SMARCD1-212ENST00000551966 UBE2D3P61077 147 aa13.9□□□□□ -0.18
SMARCD1-212ENST00000551966 UBE2D2P62837 147 aa13.9□□□□□ -0.18
SMARCD1-212ENST00000551966 SFRP2Q96HF1 295 aa13.9□□□□□ -0.18
SMARCD1-212ENST00000551966 GRIFINA4D1Z8 144 aa13.89□□□□□ -0.19
SMARCD1-212ENST00000551966 KRBOX1C9JBD0 128 aa13.89□□□□□ -0.19
SMARCD1-212ENST00000551966 TMEM262E9PQX1 116 aa13.89□□□□□ -0.19
SMARCD1-212ENST00000551966 IFITM3Q01628 133 aa13.89□□□□□ -0.19
SMARCD1-212ENST00000551966 KCNIP4Q6PIL6 250 aa13.89□□□□□ -0.19
SMARCD1-212ENST00000551966 C9orf163Q8N9P6 203 aa13.89□□□□□ -0.19
SMARCD1-212ENST00000551966 DGAT2L7PQ6IED9 249 aa13.88□□□□□ -0.19
SMARCD1-212ENST00000551966 C15orf54Q8N8G6 183 aa13.88□□□□□ -0.19
SMARCD1-212ENST00000551966 SDIM1Q6ZPB5 146 aa13.87□□□□□ -0.19
SMARCD1-212ENST00000551966 HSD17B11Q8NBQ5 300 aa13.87□□□□□ -0.19
SMARCD1-212ENST00000551966 OR11H4Q8NGC9 324 aa13.87□□□□□ -0.19
SMARCD1-212ENST00000551966 TMEM167BQ9NRX6 74 aa13.87□□□□□ -0.19
SMARCD1-212ENST00000551966 TRBV7-3A0A075B6L6 115 aa13.86□□□□□ -0.19
SMARCD1-212ENST00000551966 TRBV10-1A0A0K0K1A3 114 aa13.86□□□□□ -0.19
SMARCD1-212ENST00000551966 M0R036 132 aa13.86□□□□□ -0.19
SMARCD1-212ENST00000551966 RPL36AP83881 106 aaKnown RBP13.86□□□□□ -0.19
SMARCD1-212ENST00000551966 MPV17L2Q567V2 206 aa13.86□□□□□ -0.19
SMARCD1-212ENST00000551966 Q6ZRU5 148 aa13.86□□□□□ -0.19
SMARCD1-212ENST00000551966 RPL36ALQ969Q0 106 aaKnown RBP13.86□□□□□ -0.19
SMARCD1-212ENST00000551966 MARVELD1Q9BSK0 173 aa13.86□□□□□ -0.19
SMARCD1-212ENST00000551966 TRBV6-8A0A0A6YYG3 113 aa13.85□□□□□ -0.19
SMARCD1-212ENST00000551966 SSNA1O43805 119 aa13.85□□□□□ -0.19
SMARCD1-212ENST00000551966 CXorf1O96002 111 aa13.85□□□□□ -0.19
SMARCD1-212ENST00000551966 ATP6V0CP27449 155 aa13.85□□□□□ -0.19
SMARCD1-212ENST00000551966 ZC2HC1AQ96GY0 325 aa13.85□□□□□ -0.19
SMARCD1-212ENST00000551966 RNF213Q63HN8 5207 aa13.85□□□□□ -0.19
SMARCD1-212ENST00000551966 A0A1W2PRE2 83 aa13.84□□□□□ -0.19
SMARCD1-212ENST00000551966 M0R381 172 aa13.84□□□□□ -0.19
SMARCD1-212ENST00000551966 HLA-DQA1P01909 254 aa13.84□□□□□ -0.19
SMARCD1-212ENST00000551966 KRTAP26-1Q6PEX3 210 aa13.84□□□□□ -0.19
SMARCD1-212ENST00000551966 PSMG3Q9BT73 122 aaPredicted RBP13.84□□□□□ -0.19
SMARCD1-212ENST00000551966 PHLDA3Q9Y5J5 127 aa13.84□□□□□ -0.19
SMARCD1-212ENST00000551966 UPK1BO75841 260 aa13.83□□□□□ -0.2
SMARCD1-212ENST00000551966 CRPP02741 224 aa13.83□□□□□ -0.2
SMARCD1-212ENST00000551966 ANGP03950 147 aaKnown RBP13.83□□□□□ -0.2
SMARCD1-212ENST00000551966 Q86TA4 180 aa13.83□□□□□ -0.2
SMARCD1-212ENST00000551966 OR10G8Q8NGN5 311 aa13.83□□□□□ -0.2
SMARCD1-212ENST00000551966 NDUFA13Q9P0J0 144 aa13.83□□□□□ -0.2
SMARCD1-212ENST00000551966 SH2D1AO60880 128 aa13.82□□□□□ -0.2
SMARCD1-212ENST00000551966 LINC00299Q6ZSB3 139 aa13.82□□□□□ -0.2
SMARCD1-212ENST00000551966 COX8CQ7Z4L0 72 aa13.82□□□□□ -0.2
SMARCD1-212ENST00000551966 ACTR3CQ9C0K3 210 aaPredicted RBP13.82□□□□□ -0.2
SMARCD1-212ENST00000551966 LRP2P98164 4655 aa13.82□□□□□ -0.2
SMARCD1-212ENST00000551966 IFNA7P01567 189 aa13.81□□□□□ -0.2
SMARCD1-212ENST00000551966 TPT1P13693 172 aaKnown RBP13.81□□□□□ -0.2
SMARCD1-212ENST00000551966 SERF2P84101 59 aa13.81□□□□□ -0.2
SMARCD1-212ENST00000551966 S100ZQ8WXG8 99 aa13.81□□□□□ -0.2
SMARCD1-212ENST00000551966 TMSB15BA0A087X1C1 80 aa13.8□□□□□ -0.2
SMARCD1-212ENST00000551966 PEX7O00628 323 aa13.8□□□□□ -0.2
SMARCD1-212ENST00000551966 MBP02144 154 aa13.8□□□□□ -0.2
SMARCD1-212ENST00000551966 MIAQ16674 131 aa13.8□□□□□ -0.2
SMARCD1-212ENST00000551966 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
SMARCD1-212ENST00000551966 TNFSF18Q9UNG2 199 aa13.8□□□□□ -0.2
SMARCD1-212ENST00000551966 A0A0D9SG52 128 aa13.79□□□□□ -0.2
SMARCD1-212ENST00000551966 UBE2G2P60604 165 aa13.79□□□□□ -0.2
SMARCD1-212ENST00000551966 RPL19P84098 196 aaKnown RBP13.79□□□□□ -0.2
SMARCD1-212ENST00000551966 CIRBPQ14011 172 aaKnown RBP13.79□□□□□ -0.2
SMARCD1-212ENST00000551966 ZNF726P1Q15940 193 aa13.79□□□□□ -0.2
SMARCD1-212ENST00000551966 PRR34Q9NV39 138 aa13.79□□□□□ -0.2
SMARCD1-212ENST00000551966 PTTG1O95997 202 aa13.78□□□□□ -0.2
SMARCD1-212ENST00000551966 ZNF674Q2M3X9 581 aa13.78□□□□□ -0.2
SMARCD1-212ENST00000551966 LINC01559Q495D7 138 aa13.78□□□□□ -0.2
SMARCD1-212ENST00000551966 PRR27Q6MZM9 219 aa13.78□□□□□ -0.2
SMARCD1-212ENST00000551966 NTM-AS1Q6ZSK4 140 aa13.78□□□□□ -0.2
SMARCD1-212ENST00000551966 ZFP82Q8N141 532 aa13.78□□□□□ -0.2
SMARCD1-212ENST00000551966 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
SMARCD1-212ENST00000551966 TNXBP22105 4242 aa13.78□□□□□ -0.2
SMARCD1-212ENST00000551966 RAB4BP61018 213 aa13.77□□□□□ -0.21
SMARCD1-212ENST00000551966 FAM162BQ5T6X4 162 aa13.77□□□□□ -0.21
SMARCD1-212ENST00000551966 ZFP30Q9Y2G7 519 aa13.77□□□□□ -0.21
SMARCD1-212ENST00000551966 CLPSL2Q6UWE3 100 aa13.76□□□□□ -0.21
SMARCD1-212ENST00000551966 FAM74A7A6NL05 159 aa13.75□□□□□ -0.21
SMARCD1-212ENST00000551966 LINC00269Q8N2A0 174 aa13.75□□□□□ -0.21
SMARCD1-212ENST00000551966 HIST1H2BAQ96A08 127 aa13.75□□□□□ -0.21
SMARCD1-212ENST00000551966 RBX1P62877 108 aa13.74□□□□□ -0.21
SMARCD1-212ENST00000551966 AQP10Q96PS8 301 aa13.74□□□□□ -0.21
SMARCD1-212ENST00000551966 SLPIP03973 132 aa13.73□□□□□ -0.21
SMARCD1-212ENST00000551966 CLRN3Q8NCR9 226 aa13.73□□□□□ -0.21
SMARCD1-212ENST00000551966 A0A087WYN8 130 aa13.72□□□□□ -0.21
SMARCD1-212ENST00000551966 CNBPP62633 177 aaKnown RBP13.72□□□□□ -0.21
SMARCD1-212ENST00000551966 GAGE6Q13070 117 aa13.72□□□□□ -0.21
SMARCD1-212ENST00000551966 ODF1Q14990 250 aa13.72□□□□□ -0.21
SMARCD1-212ENST00000551966 ZNF56Q15929 161 aa13.72□□□□□ -0.21
SMARCD1-212ENST00000551966 NKX6-2Q9C056 277 aaPredicted RBP13.72□□□□□ -0.21
SMARCD1-212ENST00000551966 CHTF8P0CG12 524 aa13.71□□□□□ -0.21
SMARCD1-212ENST00000551966 PKIAP61925 76 aa13.71□□□□□ -0.21
SMARCD1-212ENST00000551966 OR10AG1Q8NH19 301 aa13.71□□□□□ -0.21
SMARCD1-212ENST00000551966 DPH3Q96FX2 82 aa13.71□□□□□ -0.21
SMARCD1-212ENST00000551966 FMC1Q96HJ9 113 aa13.71□□□□□ -0.21
SMARCD1-212ENST00000551966 VAX2Q9UIW0 290 aa13.71□□□□□ -0.21
SMARCD1-212ENST00000551966 CTXND1A0A1B0GTU2 59 aa13.7□□□□□ -0.22
SMARCD1-212ENST00000551966 LTAP01374 205 aa13.7□□□□□ -0.22
SMARCD1-212ENST00000551966 Q5BKY6 102 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms