RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 UBE2L3P68036 154 aaKnown RBP7.59□□□□□ -1.19
PTCH1-222ENST00000551425 ZNF726P1Q15940 193 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 ZNF876PQ49A33 203 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 ALKAL2Q6UX46 152 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 SDIM1Q6ZPB5 146 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 CYB561D1Q8N8Q1 229 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 MBD3L1Q8WWY6 194 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 UBE2WQ96B02 151 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 FXYD5Q96DB9 178 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 ZC2HC1AQ96GY0 325 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 MAP1LC3BQ9GZQ8 125 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 TMEM167BQ9NRX6 74 aa7.59□□□□□ -1.19
PTCH1-222ENST00000551425 H2AFB1P0C5Y9 115 aa7.58□□□□□ -1.2
PTCH1-222ENST00000551425 ARL14EPLP0DKL9 152 aa7.58□□□□□ -1.2
PTCH1-222ENST00000551425 GCHFRP30047 84 aa7.58□□□□□ -1.2
PTCH1-222ENST00000551425 Q0VG73 95 aa7.58□□□□□ -1.2
PTCH1-222ENST00000551425 ELOBQ15370 118 aa7.58□□□□□ -1.2
PTCH1-222ENST00000551425 SFT2D1Q8WV19 159 aa7.58□□□□□ -1.2
PTCH1-222ENST00000551425 SDF2L1Q9HCN8 221 aa7.58□□□□□ -1.2
PTCH1-222ENST00000551425 GAGE12JA6NER3 117 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 DIRC3C9JPN6 131 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 USP17L23D6RBM5 183 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 IFNA7P01567 189 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 PRSS1P07477 247 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 CSN1S1P47710 185 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 BLOC1S1P78537 153 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 GAGE1Q13065 139 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 GAGE4Q13068 117 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 GAGE5Q13069 117 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 FAM74A1Q5RGS3 127 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 TEX261Q6UWH6 196 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 SUN5Q8TC36 379 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 KCNS1Q96KK3 526 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 CHCHD7Q9BUK0 85 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 C1orf43Q9BWL3 253 aa7.57□□□□□ -1.2
PTCH1-222ENST00000551425 TRAV21A0A0B4J279 112 aa7.56□□□□□ -1.2
PTCH1-222ENST00000551425 FGF8P55075 233 aaPredicted RBP7.56□□□□□ -1.2
PTCH1-222ENST00000551425 RANP62826 216 aaKnown RBP7.56□□□□□ -1.2
PTCH1-222ENST00000551425 RPL19P84098 196 aaKnown RBP7.56□□□□□ -1.2
PTCH1-222ENST00000551425 PTH2Q96A98 100 aa7.56□□□□□ -1.2
PTCH1-222ENST00000551425 MUC2Q02817 5179 aa7.56□□□□□ -1.2
PTCH1-222ENST00000551425 A0A087WX48 190 aa7.55□□□□□ -1.2
PTCH1-222ENST00000551425 TRAV1-1A0A0B4J248 108 aa7.55□□□□□ -1.2
PTCH1-222ENST00000551425 A0A1W2PRE2 83 aa7.55□□□□□ -1.2
PTCH1-222ENST00000551425 WDR73Q6P4I2 378 aa7.55□□□□□ -1.2
PTCH1-222ENST00000551425 RNF185Q96GF1 192 aa7.55□□□□□ -1.2
PTCH1-222ENST00000551425 OTORQ9NRC9 128 aa7.55□□□□□ -1.2
PTCH1-222ENST00000551425 PGPA6NDG6 321 aa7.54□□□□□ -1.2
PTCH1-222ENST00000551425 ZNF506Q5JVG8 444 aa7.54□□□□□ -1.2
PTCH1-222ENST00000551425 ZFP2Q6ZN57 461 aa7.54□□□□□ -1.2
PTCH1-222ENST00000551425 ARL6IP6Q8N6S5 226 aa7.54□□□□□ -1.2
PTCH1-222ENST00000551425 LINC00479Q96M42 142 aa7.54□□□□□ -1.2
PTCH1-222ENST00000551425 NKX6-2Q9C056 277 aaPredicted RBP7.54□□□□□ -1.2
PTCH1-222ENST00000551425 Q9UF83 564 aa7.54□□□□□ -1.2
PTCH1-222ENST00000551425 A0A087WYN8 130 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 A0A1B0GV50 99 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 PGPEP1LA6NFU8 196 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 PHOX2AO14813 284 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 ENHOQ6UWT2 76 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 CMTM2Q8TAZ6 248 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 C9orf85Q96MD7 179 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 ARL2-SNX15V9GYD0 113 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 LPAP08519 4548 aa7.53□□□□□ -1.2
PTCH1-222ENST00000551425 A0A0U1RQV1 116 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 IFNA1P01562 189 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 UBE2G2P60604 165 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 SUMO1P63165 101 aaKnown RBP7.52□□□□□ -1.21
PTCH1-222ENST00000551425 DMRTA1Q5VZB9 504 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 KCNIP4Q6PIL6 250 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 SAMD10Q9BYL1 202 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 PARLQ9H300 379 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 MANBALQ9NQG1 85 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.21
PTCH1-222ENST00000551425 FAM74A7A6NL05 159 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 PAGE4O60829 102 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 HLA-DQA1P01909 254 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 TAGLN2P37802 199 aaKnown RBP7.51□□□□□ -1.21
PTCH1-222ENST00000551425 RAB14P61106 215 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 CCL20P78556 96 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 CST9LP1Q5W188 147 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 C5orf17Q8NAS9 161 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 LYPD6BQ8NI32 183 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 C7orf33Q8WU49 177 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 PLAC8Q9NZF1 115 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 GNG13Q9P2W3 67 aa7.51□□□□□ -1.21
PTCH1-222ENST00000551425 SERTM2A0A1B0GWG4 89 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 A8MWV9 139 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 F6UZH7 168 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 CRPP02741 224 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 CNBPP62633 177 aaKnown RBP7.5□□□□□ -1.21
PTCH1-222ENST00000551425 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
PTCH1-222ENST00000551425 REG3GQ6UW15 175 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 SPACA4Q8TDM5 124 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 DPH3Q96FX2 82 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 TCEAL7Q9BRU2 100 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 TREM1Q9NP99 234 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 EPDR1Q9UM22 224 aa7.5□□□□□ -1.21
PTCH1-222ENST00000551425 K7EQM0 130 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms