RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
DDX54-208ENST00000551344 VAX2Q9UIW0 290 aa12.87□□□□□ -0.35
DDX54-208ENST00000551344 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
DDX54-208ENST00000551344 DNAH11Q96DT5 4516 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 A0A087WWL8 130 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 GAGE12JA6NER3 117 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 SNAI2O43623 268 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 OR5AL1P0C617 328 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 LINC00694P0DN24 101 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 GAGE1Q13065 139 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 GAGE4Q13068 117 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 GAGE5Q13069 117 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 GAGE13Q4V321 117 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 CENPWQ5EE01 88 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 LINC01556Q5JQF7 62 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 C14orf178Q8N769 122 aaPredicted RBP12.86□□□□□ -0.35
DDX54-208ENST00000551344 MED9Q9NWA0 146 aa12.86□□□□□ -0.35
DDX54-208ENST00000551344 C16orf90A8MZG2 172 aa12.85□□□□□ -0.35
DDX54-208ENST00000551344 IGLV2-8P01709 118 aa12.85□□□□□ -0.35
DDX54-208ENST00000551344 GNG4P50150 75 aa12.85□□□□□ -0.35
DDX54-208ENST00000551344 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
DDX54-208ENST00000551344 Q9UF83 564 aa12.85□□□□□ -0.35
DDX54-208ENST00000551344 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
DDX54-208ENST00000551344 BLOC1S1P78537 153 aa12.84□□□□□ -0.35
DDX54-208ENST00000551344 SPATA12Q7Z6I5 190 aa12.84□□□□□ -0.35
DDX54-208ENST00000551344 OR10AG1Q8NH19 301 aa12.84□□□□□ -0.35
DDX54-208ENST00000551344 A0A087WWC5 75 aa12.83□□□□□ -0.36
DDX54-208ENST00000551344 TRBV10-1A0A0K0K1A3 114 aa12.83□□□□□ -0.36
DDX54-208ENST00000551344 BIN3Q9NQY0 253 aa12.83□□□□□ -0.36
DDX54-208ENST00000551344 EREGO14944 169 aa12.82□□□□□ -0.36
DDX54-208ENST00000551344 RPS20P60866 119 aaKnown RBP12.82□□□□□ -0.36
DDX54-208ENST00000551344 SPANXN1Q5VSR9 72 aa12.82□□□□□ -0.36
DDX54-208ENST00000551344 ALKAL2Q6UX46 152 aa12.82□□□□□ -0.36
DDX54-208ENST00000551344 DYNC1H1Q14204 4646 aaKnown RBP12.82□□□□□ -0.36
DDX54-208ENST00000551344 C19orf71A6NCJ1 209 aa12.81□□□□□ -0.36
DDX54-208ENST00000551344 IBA57-AS1B1ANH7 110 aa12.81□□□□□ -0.36
DDX54-208ENST00000551344 RAB4BP61018 213 aa12.81□□□□□ -0.36
DDX54-208ENST00000551344 ERVFC1-1P60608 527 aa12.8□□□□□ -0.36
DDX54-208ENST00000551344 OR2D3Q8NGH3 330 aa12.8□□□□□ -0.36
DDX54-208ENST00000551344 LYPD6BQ8NI32 183 aa12.8□□□□□ -0.36
DDX54-208ENST00000551344 KIAA1109Q2LD37 5005 aa12.79□□□□□ -0.36
DDX54-208ENST00000551344 TRBV20OR9-2A0A075B6H5 130 aa12.79□□□□□ -0.36
DDX54-208ENST00000551344 TRBV7-3A0A075B6L6 115 aa12.79□□□□□ -0.36
DDX54-208ENST00000551344 A0A1B0GVG6 124 aa12.79□□□□□ -0.36
DDX54-208ENST00000551344 XKRY2A2RUG3 117 aa12.79□□□□□ -0.36
DDX54-208ENST00000551344 KRTAP10-2P60368 255 aa12.79□□□□□ -0.36
DDX54-208ENST00000551344 RPL36AP83881 106 aaKnown RBP12.79□□□□□ -0.36
DDX54-208ENST00000551344 RPL36ALQ969Q0 106 aaKnown RBP12.79□□□□□ -0.36
DDX54-208ENST00000551344 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
DDX54-208ENST00000551344 MUC21A0A0G2JKD1 596 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 MUC21A0A140T8X8 626 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 P01737 135 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 IGHV3-30P01768 117 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 IGHV3-33P01772 117 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 IGLC6P0CF74 106 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 IGHV3-30-3P0DP02 117 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 IGHV3-30-5P0DP03 117 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 OR10G8Q8NGN5 311 aa12.78□□□□□ -0.36
DDX54-208ENST00000551344 A0A087WTM6 91 aa12.77□□□□□ -0.37
DDX54-208ENST00000551344 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.37
DDX54-208ENST00000551344 ZNF56Q15929 161 aa12.77□□□□□ -0.37
DDX54-208ENST00000551344 FER1L6-AS1Q8NA97 138 aa12.77□□□□□ -0.37
DDX54-208ENST00000551344 HERC2O95714 4834 aa12.77□□□□□ -0.37
DDX54-208ENST00000551344 F2Z2F3 143 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 TMEM250H0YL14 139 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 GZMBP10144 247 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 NKX2-5P52952 324 aaPredicted RBP12.76□□□□□ -0.37
DDX54-208ENST00000551344 UBE2D3P61077 147 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 SSTP61278 116 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 UBE2D2P62837 147 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 CACNG7P62955 275 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 LAGE3Q14657 143 aa12.76□□□□□ -0.37
DDX54-208ENST00000551344 F5H697 171 aa12.75□□□□□ -0.37
DDX54-208ENST00000551344 CDK2AP2O75956 126 aa12.75□□□□□ -0.37
DDX54-208ENST00000551344 NUDT10Q8NFP7 164 aa12.75□□□□□ -0.37
DDX54-208ENST00000551344 NUDT11Q96G61 164 aa12.75□□□□□ -0.37
DDX54-208ENST00000551344 AP1S3Q96PC3 154 aa12.75□□□□□ -0.37
DDX54-208ENST00000551344 TPPP3Q9BW30 176 aa12.75□□□□□ -0.37
DDX54-208ENST00000551344 KIF25-AS1Q9Y6Z4 181 aa12.75□□□□□ -0.37
DDX54-208ENST00000551344 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
DDX54-208ENST00000551344 OCC1Q8TAD7 63 aa12.74□□□□□ -0.37
DDX54-208ENST00000551344 PSCAO43653 123 aa12.73□□□□□ -0.37
DDX54-208ENST00000551344 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.73□□□□□ -0.37
DDX54-208ENST00000551344 NEXN-AS1Q8NBZ9 246 aa12.73□□□□□ -0.37
DDX54-208ENST00000551344 TRAV8-3A0A0A6YYJ7 113 aa12.72□□□□□ -0.37
DDX54-208ENST00000551344 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
DDX54-208ENST00000551344 TOR2AQ5JU69 321 aa12.72□□□□□ -0.37
DDX54-208ENST00000551344 WDR73Q6P4I2 378 aa12.72□□□□□ -0.37
DDX54-208ENST00000551344 NIT1Q86X76 327 aa12.72□□□□□ -0.37
DDX54-208ENST00000551344 TM2D2Q9BX73 214 aa12.72□□□□□ -0.37
DDX54-208ENST00000551344 Q9HAA7 133 aa12.72□□□□□ -0.37
DDX54-208ENST00000551344 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
DDX54-208ENST00000551344 LYZL1Q6UWQ5 148 aa12.71□□□□□ -0.37
DDX54-208ENST00000551344 DAZ4Q86SG3 579 aaKnown RBP12.71□□□□□ -0.37
DDX54-208ENST00000551344 Q8N3U1 123 aa12.71□□□□□ -0.37
DDX54-208ENST00000551344 DAZ3Q9NR90 486 aaKnown RBP12.71□□□□□ -0.37
DDX54-208ENST00000551344 K7EN84 100 aa12.7□□□□□ -0.38
DDX54-208ENST00000551344 CHCHD7Q9BUK0 85 aa12.7□□□□□ -0.38
DDX54-208ENST00000551344 EIF5A2Q9GZV4 153 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms