RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 SSBP4Q9BWG4 385 aaPredicted RBP12.19□□□□□ -0.46
TUBA1A-206ENST00000550254 MED9Q9NWA0 146 aa12.19□□□□□ -0.46
TUBA1A-206ENST00000550254 TRBV20OR9-2A0A075B6H5 130 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 GAGE12JA6NER3 117 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 RHODO00212 210 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 SNAI2O43623 268 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 GAGE1Q13065 139 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 GAGE4Q13068 117 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 GAGE5Q13069 117 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 GAGE13Q4V321 117 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 FAM74A4Q5TZK3 123 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
TUBA1A-206ENST00000550254 C19orf71A6NCJ1 209 aa12.17□□□□□ -0.46
TUBA1A-206ENST00000550254 GNG4P50150 75 aa12.17□□□□□ -0.46
TUBA1A-206ENST00000550254 GTSF1LQ9H1H1 148 aa12.17□□□□□ -0.46
TUBA1A-206ENST00000550254 TRAV9-2A0A087WT02 112 aa12.16□□□□□ -0.46
TUBA1A-206ENST00000550254 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
TUBA1A-206ENST00000550254 EVI2AP22794 236 aa12.16□□□□□ -0.46
TUBA1A-206ENST00000550254 TAGLN2P37802 199 aaKnown RBP12.16□□□□□ -0.46
TUBA1A-206ENST00000550254 BLOC1S1P78537 153 aa12.16□□□□□ -0.46
TUBA1A-206ENST00000550254 LELP1Q5T871 98 aa12.16□□□□□ -0.46
TUBA1A-206ENST00000550254 LYPD6BQ8NI32 183 aa12.16□□□□□ -0.46
TUBA1A-206ENST00000550254 SMIM12Q96EX1 92 aa12.16□□□□□ -0.46
TUBA1A-206ENST00000550254 IGHV3-38A0A0C4DH36 116 aa12.15□□□□□ -0.46
TUBA1A-206ENST00000550254 MUC21A0A0G2JKD1 596 aa12.15□□□□□ -0.46
TUBA1A-206ENST00000550254 MUC21A0A140T8X8 626 aa12.15□□□□□ -0.46
TUBA1A-206ENST00000550254 K7EP13 123 aa12.15□□□□□ -0.46
TUBA1A-206ENST00000550254 GZMBP10144 247 aa12.14□□□□□ -0.47
TUBA1A-206ENST00000550254 OR10J3Q5JRS4 329 aa12.14□□□□□ -0.47
TUBA1A-206ENST00000550254 TRAV8-6A0A0B4J262 113 aa12.13□□□□□ -0.47
TUBA1A-206ENST00000550254 LINC01556Q5JQF7 62 aa12.13□□□□□ -0.47
TUBA1A-206ENST00000550254 DAZAP1Q96EP5 407 aaKnown RBP12.13□□□□□ -0.47
TUBA1A-206ENST00000550254 MSRB1Q9NZV6 116 aa12.13□□□□□ -0.47
TUBA1A-206ENST00000550254 RBFOX3A6NFN3 312 aa12.12□□□□□ -0.47
TUBA1A-206ENST00000550254 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
TUBA1A-206ENST00000550254 SPANXN1Q5VSR9 72 aa12.12□□□□□ -0.47
TUBA1A-206ENST00000550254 OR2D3Q8NGH3 330 aa12.12□□□□□ -0.47
TUBA1A-206ENST00000550254 SSTP61278 116 aa12.11□□□□□ -0.47
TUBA1A-206ENST00000550254 SPATA12Q7Z6I5 190 aa12.11□□□□□ -0.47
TUBA1A-206ENST00000550254 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
TUBA1A-206ENST00000550254 C10orf126Q8N4M7 172 aa12.11□□□□□ -0.47
TUBA1A-206ENST00000550254 KRTAP10-2P60368 255 aa12.1□□□□□ -0.47
TUBA1A-206ENST00000550254 RPS20P60866 119 aaKnown RBP12.1□□□□□ -0.47
TUBA1A-206ENST00000550254 RAB4BP61018 213 aa12.1□□□□□ -0.47
TUBA1A-206ENST00000550254 NUDT10Q8NFP7 164 aa12.1□□□□□ -0.47
TUBA1A-206ENST00000550254 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
TUBA1A-206ENST00000550254 NUDT11Q96G61 164 aa12.1□□□□□ -0.47
TUBA1A-206ENST00000550254 KIF25-AS1Q9Y6Z4 181 aa12.1□□□□□ -0.47
TUBA1A-206ENST00000550254 DNAH5Q8TE73 4624 aa12.1□□□□□ -0.47
TUBA1A-206ENST00000550254 LRP1BQ9NZR2 4599 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 TRBV10-1A0A0K0K1A3 114 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 C16orf90A8MZG2 172 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 IBA57-AS1B1ANH7 110 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 K7EN84 100 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 P01737 135 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 IGHV3-30P01768 117 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 IGHV3-33P01772 117 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 IGHV3-30-3P0DP02 117 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 IGHV3-30-5P0DP03 117 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 Q8N3U1 123 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 FER1L6-AS1Q8NA97 138 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 BIN3Q9NQY0 253 aa12.09□□□□□ -0.47
TUBA1A-206ENST00000550254 TMEM250H0YL14 139 aa12.08□□□□□ -0.48
TUBA1A-206ENST00000550254 UBE2D3P61077 147 aa12.08□□□□□ -0.48
TUBA1A-206ENST00000550254 UBE2D2P62837 147 aa12.08□□□□□ -0.48
TUBA1A-206ENST00000550254 ZNF56Q15929 161 aa12.08□□□□□ -0.48
TUBA1A-206ENST00000550254 TPPP3Q9BW30 176 aa12.08□□□□□ -0.48
TUBA1A-206ENST00000550254 RPL36AP83881 106 aaKnown RBP12.07□□□□□ -0.48
TUBA1A-206ENST00000550254 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
TUBA1A-206ENST00000550254 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
TUBA1A-206ENST00000550254 RPL36ALQ969Q0 106 aaKnown RBP12.07□□□□□ -0.48
TUBA1A-206ENST00000550254 TRBV7-3A0A075B6L6 115 aa12.06□□□□□ -0.48
TUBA1A-206ENST00000550254 A0A087WWC5 75 aa12.06□□□□□ -0.48
TUBA1A-206ENST00000550254 TOR2AQ5JU69 321 aa12.06□□□□□ -0.48
TUBA1A-206ENST00000550254 RNASE7Q9H1E1 156 aaKnown RBP12.06□□□□□ -0.48
TUBA1A-206ENST00000550254 RYR1P21817 5038 aa12.06□□□□□ -0.48
TUBA1A-206ENST00000550254 A0A087WTM6 91 aa12.05□□□□□ -0.48
TUBA1A-206ENST00000550254 XKRY2A2RUG3 117 aa12.05□□□□□ -0.48
TUBA1A-206ENST00000550254 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
TUBA1A-206ENST00000550254 CACNG7P62955 275 aa12.05□□□□□ -0.48
TUBA1A-206ENST00000550254 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
TUBA1A-206ENST00000550254 FAM210AQ96ND0 272 aa12.05□□□□□ -0.48
TUBA1A-206ENST00000550254 AP1S3Q96PC3 154 aa12.05□□□□□ -0.48
TUBA1A-206ENST00000550254 F2Z2F3 143 aa12.04□□□□□ -0.48
TUBA1A-206ENST00000550254 F5H697 171 aa12.04□□□□□ -0.48
TUBA1A-206ENST00000550254 EIF5A2Q9GZV4 153 aaKnown RBP12.04□□□□□ -0.48
TUBA1A-206ENST00000550254 NDUFS6O75380 124 aaKnown RBP12.03□□□□□ -0.48
TUBA1A-206ENST00000550254 SMIM17P0DL12 118 aa12.03□□□□□ -0.48
TUBA1A-206ENST00000550254 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
TUBA1A-206ENST00000550254 RPP21Q9H633 154 aaKnown RBP12.03□□□□□ -0.48
TUBA1A-206ENST00000550254 Q9HAA7 133 aa12.03□□□□□ -0.48
TUBA1A-206ENST00000550254 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
TUBA1A-206ENST00000550254 NTF3P20783 257 aa12.02□□□□□ -0.49
TUBA1A-206ENST00000550254 FUSP35637 526 aaKnown RBP eCLIP12.02□□□□□ -0.49
TUBA1A-206ENST00000550254 CEBPGP53567 150 aa12.02□□□□□ -0.49
TUBA1A-206ENST00000550254 NIT1Q86X76 327 aa12.02□□□□□ -0.49
TUBA1A-206ENST00000550254 EREGO14944 169 aa12.01□□□□□ -0.49
TUBA1A-206ENST00000550254 SRP19P09132 144 aaKnown RBP12.01□□□□□ -0.49
TUBA1A-206ENST00000550254 CTRLP40313 264 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms