RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 UMAD1C9J7I0 102 aa10.94□□□□□ -0.66
VPS29-207ENST00000549970 M0R381 172 aa10.94□□□□□ -0.66
VPS29-207ENST00000549970 RHODO00212 210 aa10.94□□□□□ -0.66
VPS29-207ENST00000549970 BCL2L11O43521 198 aa10.94□□□□□ -0.66
VPS29-207ENST00000549970 TPT1P13693 172 aaKnown RBP10.94□□□□□ -0.66
VPS29-207ENST00000549970 LINC01559Q495D7 138 aa10.94□□□□□ -0.66
VPS29-207ENST00000549970 MBD3L1Q8WWY6 194 aa10.94□□□□□ -0.66
VPS29-207ENST00000549970 A0A0D9SG52 128 aa10.93□□□□□ -0.66
VPS29-207ENST00000549970 SCO2A0A1W2PP80 73 aa10.93□□□□□ -0.66
VPS29-207ENST00000549970 LRCOL1A6NCL2 159 aa10.93□□□□□ -0.66
VPS29-207ENST00000549970 PFDN1O60925 122 aa10.92□□□□□ -0.66
VPS29-207ENST00000549970 GCSHP23434 173 aa10.92□□□□□ -0.66
VPS29-207ENST00000549970 XGP55808 180 aa10.92□□□□□ -0.66
VPS29-207ENST00000549970 SFRP2Q96HF1 295 aa10.92□□□□□ -0.66
VPS29-207ENST00000549970 DNAH8Q96JB1 4490 aa10.92□□□□□ -0.66
VPS29-207ENST00000549970 IGLV5-52A0A0A0MRZ9 124 aa10.91□□□□□ -0.66
VPS29-207ENST00000549970 RPL19P84098 196 aaKnown RBP10.91□□□□□ -0.66
VPS29-207ENST00000549970 LAGE3Q14657 143 aa10.91□□□□□ -0.66
VPS29-207ENST00000549970 ZFP82Q8N141 532 aa10.91□□□□□ -0.66
VPS29-207ENST00000549970 S100A9P06702 114 aaKnown RBP10.9□□□□□ -0.66
VPS29-207ENST00000549970 H2AFB1P0C5Y9 115 aa10.9□□□□□ -0.66
VPS29-207ENST00000549970 DAZ4Q86SG3 579 aaKnown RBP10.9□□□□□ -0.66
VPS29-207ENST00000549970 DAZ3Q9NR90 486 aaKnown RBP10.9□□□□□ -0.66
VPS29-207ENST00000549970 A0A087WWC5 75 aa10.89□□□□□ -0.67
VPS29-207ENST00000549970 EPM2AB3EWF7 344 aa10.89□□□□□ -0.67
VPS29-207ENST00000549970 EIF5AP63241 154 aaKnown RBP10.89□□□□□ -0.67
VPS29-207ENST00000549970 BAGE2Q86Y30 109 aa10.89□□□□□ -0.67
VPS29-207ENST00000549970 Q8N814 137 aa10.89□□□□□ -0.67
VPS29-207ENST00000549970 VPS13BQ7Z7G8 4022 aa10.88□□□□□ -0.67
VPS29-207ENST00000549970 PRR27Q6MZM9 219 aa10.88□□□□□ -0.67
VPS29-207ENST00000549970 TMUB2Q71RG4 321 aa10.88□□□□□ -0.67
VPS29-207ENST00000549970 NTN5Q8WTR8 489 aaPredicted RBP10.88□□□□□ -0.67
VPS29-207ENST00000549970 TM2D2Q9BX73 214 aa10.88□□□□□ -0.67
VPS29-207ENST00000549970 OR10AG1Q8NH19 301 aa10.87□□□□□ -0.67
VPS29-207ENST00000549970 MLST8Q9BVC4 326 aa10.87□□□□□ -0.67
VPS29-207ENST00000549970 TRAV8-3A0A0A6YYJ7 113 aa10.86□□□□□ -0.67
VPS29-207ENST00000549970 HAMPP81172 84 aa10.86□□□□□ -0.67
VPS29-207ENST00000549970 TOR2AQ5JU69 321 aa10.86□□□□□ -0.67
VPS29-207ENST00000549970 URGCP-MRPS24S4R325 110 aa10.86□□□□□ -0.67
VPS29-207ENST00000549970 MUC21A0A0G2JKD1 596 aa10.85□□□□□ -0.67
VPS29-207ENST00000549970 TRBV10-1A0A0K0K1A3 114 aa10.85□□□□□ -0.67
VPS29-207ENST00000549970 MUC21A0A140T8X8 626 aa10.85□□□□□ -0.67
VPS29-207ENST00000549970 CXCL1P09341 107 aa10.85□□□□□ -0.67
VPS29-207ENST00000549970 RPL36AP83881 106 aaKnown RBP10.85□□□□□ -0.67
VPS29-207ENST00000549970 WFDC2Q14508 124 aa10.85□□□□□ -0.67
VPS29-207ENST00000549970 NIT1Q86X76 327 aa10.85□□□□□ -0.67
VPS29-207ENST00000549970 RPL36ALQ969Q0 106 aaKnown RBP10.85□□□□□ -0.67
VPS29-207ENST00000549970 GNG13Q9P2W3 67 aa10.85□□□□□ -0.67
VPS29-207ENST00000549970 LECT2O14960 151 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 RPL35P42766 123 aaKnown RBP10.84□□□□□ -0.67
VPS29-207ENST00000549970 UBE2D3P61077 147 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 SSTP61278 116 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 UBE2D2P62837 147 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 CCL20P78556 96 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 ZNF56Q15929 161 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 Q5VSD8 79 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 FRZBQ92765 325 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 MANBALQ9NQG1 85 aa10.84□□□□□ -0.67
VPS29-207ENST00000549970 TRBV7-3A0A075B6L6 115 aa10.83□□□□□ -0.68
VPS29-207ENST00000549970 SNAI2O43623 268 aa10.83□□□□□ -0.68
VPS29-207ENST00000549970 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
VPS29-207ENST00000549970 SPANXN1Q5VSR9 72 aa10.83□□□□□ -0.68
VPS29-207ENST00000549970 DNAJC30Q96LL9 226 aa10.83□□□□□ -0.68
VPS29-207ENST00000549970 DERL1Q9BUN8 251 aa10.83□□□□□ -0.68
VPS29-207ENST00000549970 KLK12Q9UKR0 248 aa10.83□□□□□ -0.68
VPS29-207ENST00000549970 RAB4BP61018 213 aa10.82□□□□□ -0.68
VPS29-207ENST00000549970 TMEM70Q9BUB7 260 aa10.82□□□□□ -0.68
VPS29-207ENST00000549970 SSBP4Q9BWG4 385 aaPredicted RBP10.82□□□□□ -0.68
VPS29-207ENST00000549970 IGKV2D-24A0A075B6R9 120 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 A0A087WX48 190 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 OR5AL1P0C617 328 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 KCNIP4Q6PIL6 250 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 NEXN-AS1Q8NBZ9 246 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 OR10G8Q8NGN5 311 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 BAALCQ8WXS3 180 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 C11orf52Q96A22 123 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 RMI2Q96E14 147 aa10.81□□□□□ -0.68
VPS29-207ENST00000549970 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.8□□□□□ -0.68
VPS29-207ENST00000549970 TRAV1-1A0A0B4J248 108 aa10.8□□□□□ -0.68
VPS29-207ENST00000549970 F5H697 171 aa10.8□□□□□ -0.68
VPS29-207ENST00000549970 TEX46H3BTG2 121 aa10.8□□□□□ -0.68
VPS29-207ENST00000549970 RAB5CP51148 216 aa10.8□□□□□ -0.68
VPS29-207ENST00000549970 CENPWQ5EE01 88 aa10.8□□□□□ -0.68
VPS29-207ENST00000549970 EIF5AL1Q6IS14 154 aaKnown RBP10.8□□□□□ -0.68
VPS29-207ENST00000549970 UBE2WQ96B02 151 aa10.8□□□□□ -0.68
VPS29-207ENST00000549970 COX11Q9Y6N1 276 aa10.8□□□□□ -0.68
VPS29-207ENST00000549970 TMEM262E9PQX1 116 aa10.79□□□□□ -0.68
VPS29-207ENST00000549970 INAFM2P0DMQ5 153 aa10.79□□□□□ -0.68
VPS29-207ENST00000549970 CHCHD7Q9BUK0 85 aa10.79□□□□□ -0.68
VPS29-207ENST00000549970 FAM30AQ9NZY2 134 aa10.79□□□□□ -0.68
VPS29-207ENST00000549970 TRBV6-8A0A0A6YYG3 113 aa10.78□□□□□ -0.68
VPS29-207ENST00000549970 SMIM17P0DL12 118 aa10.78□□□□□ -0.68
VPS29-207ENST00000549970 GZMBP10144 247 aa10.78□□□□□ -0.68
VPS29-207ENST00000549970 SULT1A2P50226 295 aa10.78□□□□□ -0.68
VPS29-207ENST00000549970 ELOBQ15370 118 aa10.78□□□□□ -0.68
VPS29-207ENST00000549970 AP1S3Q96PC3 154 aa10.78□□□□□ -0.68
VPS29-207ENST00000549970 TPPP3Q9BW30 176 aa10.78□□□□□ -0.68
VPS29-207ENST00000549970 RAB19A4D1S5 217 aa10.77□□□□□ -0.69
VPS29-207ENST00000549970 RBFOX3A6NFN3 312 aa10.77□□□□□ -0.69
VPS29-207ENST00000549970 IGLV2-8P01709 118 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms