RNA–Protein interactions for RNA: ENST00000549947.1

CNOT2-221, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-221ENST00000549947 SETBP1Q9Y6X0 1596 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
CNOT2-221ENST00000549947 ARHGAP31Q2M1Z3 1444 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 CEP162Q5TB80 1403 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 COL6A3P12111 3177 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 WDFY4Q6ZS81 3184 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 EP400Q96L91 3159 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 LPAP08519 4548 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 SPAG17Q6Q759 2223 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 ANKRD17O75179 2603 aaKnown RBP0.16□□□□□ -2.38
CNOT2-221ENST00000549947 TRAV12-2A0A075B6T6 113 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 A0A1B0GX51 115 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 C10orf142B7Z368 130 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 F2Z2F3 143 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 ATP6V1G2-DDX39BF2Z307 99 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 ARPC5O15511 151 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 PITX3O75364 302 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 RBP4P02753 201 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 TDRG1Q3Y452 100 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 C4orf33Q8N1A6 199 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 MMGT1Q8N4V1 131 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 MAGOHBQ96A72 148 aaKnown RBP0.16□□□□□ -2.38
CNOT2-221ENST00000549947 C14orf144Q96I85 54 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 PRR15LQ9BU68 103 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 MRPL40Q9NQ50 206 aaKnown RBP0.16□□□□□ -2.38
CNOT2-221ENST00000549947 SPANXCQ9NY87 97 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 RREB1Q92766 1687 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 CMYA5Q8N3K9 4069 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 PKD1P98161 4303 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 TOP2AP11388 1531 aaKnown RBP0.16□□□□□ -2.38
CNOT2-221ENST00000549947 SACSQ9NZJ4 4579 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 DNAH7Q8WXX0 4024 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 PRKDCP78527 4128 aaKnown RBP0.16□□□□□ -2.38
CNOT2-221ENST00000549947 ANKRD30AQ9BXX3 1397 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 A0A0C4DFX4 3053 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 HECTD4Q9Y4D8 3996 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 DYNC1H1Q14204 4646 aaKnown RBP0.16□□□□□ -2.38
CNOT2-221ENST00000549947 LRP5O75197 1615 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 SCRIBQ14160 1630 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 MADDQ8WXG6 1647 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 FAT1Q14517 4588 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 FAT3Q8TDW7 4589 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 ERCC6Q03468 1493 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 ABCC10Q5T3U5 1492 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 MBD5Q9P267 1494 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 WDR7Q9Y4E6 1490 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 RAPGEF2Q9Y4G8 1499 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 VPS13BQ7Z7G8 4022 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 HTTP42858 3142 aa0.16□□□□□ -2.38
CNOT2-221ENST00000549947 UNC13BO14795 1591 aa0.15□□□□□ -2.38
CNOT2-221ENST00000549947 SYNJ1O43426 1573 aa0.15□□□□□ -2.38
CNOT2-221ENST00000549947 GLI2P10070 1586 aa0.15□□□□□ -2.38
CNOT2-221ENST00000549947 ADAMTS12P58397 1594 aa0.15□□□□□ -2.38
CNOT2-221ENST00000549947 PSME4Q14997 1843 aa0.15□□□□□ -2.38
CNOT2-221ENST00000549947 PLECQ15149 4684 aaKnown RBP0.15□□□□□ -2.38
CNOT2-221ENST00000549947 VPS13AQ96RL7 3174 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 ZNF831Q5JPB2 1677 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 ITSN2Q9NZM3 1697 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 CASKIN1Q8WXD9 1431 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 KIDINS220Q9ULH0 1771 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 KMT2AQ03164 3969 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 BDP1A6H8Y1 2624 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 MAPKBP1O60336 1514 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 SLIT1O75093 1534 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 CDK13Q14004 1512 aaKnown RBP0.15□□□□□ -2.39
CNOT2-221ENST00000549947 CLASP1Q7Z460 1538 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 ABCA10Q8WWZ4 1543 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 KDM5DQ9BY66 1539 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 BORCS7-ASMTA0A0B4J1R7 106 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 TRAV2A0A0B4J234 112 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 CCDC179H3BU77 68 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 MPC2O95563 127 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 CFDP00746 253 aaPredicted RBP0.15□□□□□ -2.39
CNOT2-221ENST00000549947 SPINK1P00995 79 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 SCTP09683 121 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 NBEAP1P0C6P0 100 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 SARNPP82979 210 aaKnown RBP0.15□□□□□ -2.39
CNOT2-221ENST00000549947 ALX1Q15699 326 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 PYY3Q5JQD4 70 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 NCMAPQ5T1S8 102 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 C9orf62Q8N4C0 152 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 DYNLRB2Q8TF09 96 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 C10orf82Q8WW14 230 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 C12orf57Q99622 126 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 AIF1LQ9BQI0 150 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 SNHG12Q9BXW3 62 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 BATF3Q9NR55 127 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 SPANXA1Q9NS26 97 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 HIGD1AQ9Y241 93 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 NOP16Q9Y3C1 178 aaKnown RBP0.15□□□□□ -2.39
CNOT2-221ENST00000549947 WDR97A6NE52 1622 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 NESP48681 1621 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 TARBP1Q13395 1621 aaKnown RBP0.15□□□□□ -2.39
CNOT2-221ENST00000549947 IQGAP3Q86VI3 1631 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 FREM2Q5SZK8 3169 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 TNXBP22105 4242 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 XRN1Q8IZH2 1706 aaKnown RBP0.15□□□□□ -2.39
CNOT2-221ENST00000549947 LRRIQ1Q96JM4 1722 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 PKHD1P08F94 4074 aa0.15□□□□□ -2.39
CNOT2-221ENST00000549947 MED14O60244 1454 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms