RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 UFSP1Q6NVU6 142 aa7.68□□□□□ -1.18
BEST3-209ENST00000548658 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
BEST3-209ENST00000548658 MAPKAPK5-AS1Q8N8E1 139 aa7.68□□□□□ -1.18
BEST3-209ENST00000548658 SFRP2Q96HF1 295 aa7.68□□□□□ -1.18
BEST3-209ENST00000548658 TRAV1-1A0A0B4J248 108 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 A0A1B0GV50 99 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 M0R381 172 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 CXCL1P09341 107 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 GAGE1Q13065 139 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 GAGE4Q13068 117 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 GAGE5Q13069 117 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 TOR2AQ5JU69 321 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 FAM74A4Q5TZK3 123 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 Q6ZSN1 163 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 MLST8Q9BVC4 326 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 TM2D2Q9BX73 214 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 SAMD10Q9BYL1 202 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 JPT2Q9H910 190 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 MANBALQ9NQG1 85 aa7.67□□□□□ -1.18
BEST3-209ENST00000548658 TMSB15BA0A087X1C1 80 aa7.66□□□□□ -1.18
BEST3-209ENST00000548658 TRAV8-3A0A0A6YYJ7 113 aa7.66□□□□□ -1.18
BEST3-209ENST00000548658 SCO2A0A1W2PP80 73 aa7.66□□□□□ -1.18
BEST3-209ENST00000548658 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
BEST3-209ENST00000548658 Q8N1X5 172 aa7.66□□□□□ -1.18
BEST3-209ENST00000548658 IGHV3-30P01768 117 aa7.65□□□□□ -1.18
BEST3-209ENST00000548658 IGHV3-33P01772 117 aa7.65□□□□□ -1.18
BEST3-209ENST00000548658 IGHV3-30-3P0DP02 117 aa7.65□□□□□ -1.18
BEST3-209ENST00000548658 IGHV3-30-5P0DP03 117 aa7.65□□□□□ -1.18
BEST3-209ENST00000548658 C14orf178Q8N769 122 aaPredicted RBP7.65□□□□□ -1.18
BEST3-209ENST00000548658 LRP1BQ9NZR2 4599 aa7.65□□□□□ -1.18
BEST3-209ENST00000548658 URGCP-MRPS24S4R325 110 aa7.65□□□□□ -1.18
BEST3-209ENST00000548658 A0A087WWL8 130 aa7.64□□□□□ -1.19
BEST3-209ENST00000548658 RPL35P42766 123 aaKnown RBP7.64□□□□□ -1.19
BEST3-209ENST00000548658 RAB4BP61018 213 aa7.64□□□□□ -1.19
BEST3-209ENST00000548658 RPL36AP83881 106 aaKnown RBP7.64□□□□□ -1.19
BEST3-209ENST00000548658 TCTE3Q8IZS6 198 aa7.64□□□□□ -1.19
BEST3-209ENST00000548658 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.64□□□□□ -1.19
BEST3-209ENST00000548658 NTN5Q8WTR8 489 aaPredicted RBP7.64□□□□□ -1.19
BEST3-209ENST00000548658 RPL36ALQ969Q0 106 aaKnown RBP7.64□□□□□ -1.19
BEST3-209ENST00000548658 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
BEST3-209ENST00000548658 Q9HAA7 133 aa7.64□□□□□ -1.19
BEST3-209ENST00000548658 GNG13Q9P2W3 67 aa7.64□□□□□ -1.19
BEST3-209ENST00000548658 COX11Q9Y6N1 276 aa7.64□□□□□ -1.19
BEST3-209ENST00000548658 TRBV7-3A0A075B6L6 115 aa7.63□□□□□ -1.19
BEST3-209ENST00000548658 IFNA1P01562 189 aa7.63□□□□□ -1.19
BEST3-209ENST00000548658 OR5AL1P0C617 328 aa7.63□□□□□ -1.19
BEST3-209ENST00000548658 GCSHP23434 173 aa7.63□□□□□ -1.19
BEST3-209ENST00000548658 PRR27Q6MZM9 219 aa7.63□□□□□ -1.19
BEST3-209ENST00000548658 KCNIP4Q6PIL6 250 aa7.63□□□□□ -1.19
BEST3-209ENST00000548658 C11orf52Q96A22 123 aa7.63□□□□□ -1.19
BEST3-209ENST00000548658 SMIM12Q96EX1 92 aa7.63□□□□□ -1.19
BEST3-209ENST00000548658 HSPG2P98160 4391 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 LRCOL1A6NCL2 159 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 SNAI2O43623 268 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 PDE6DO43924 150 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 TAGLN2P37802 199 aaKnown RBP7.62□□□□□ -1.19
BEST3-209ENST00000548658 SULT1A2P50226 295 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 CCL20P78556 96 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 ELOBQ15370 118 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 SPANXN1Q5VSR9 72 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 SLC51BQ86UW2 128 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 RMI2Q96E14 147 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 DAZAP1Q96EP5 407 aaKnown RBP7.62□□□□□ -1.19
BEST3-209ENST00000548658 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
BEST3-209ENST00000548658 BIN3Q9NQY0 253 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 Q9UF83 564 aa7.62□□□□□ -1.19
BEST3-209ENST00000548658 A0A087WX48 190 aa7.61□□□□□ -1.19
BEST3-209ENST00000548658 IGLV5-52A0A0A0MRZ9 124 aa7.61□□□□□ -1.19
BEST3-209ENST00000548658 C1QBP02746 253 aa7.61□□□□□ -1.19
BEST3-209ENST00000548658 SMIM17P0DL12 118 aa7.61□□□□□ -1.19
BEST3-209ENST00000548658 RPS20P60866 119 aaKnown RBP7.61□□□□□ -1.19
BEST3-209ENST00000548658 RPL19P84098 196 aaKnown RBP7.61□□□□□ -1.19
BEST3-209ENST00000548658 MEF2BQ02080 365 aaPredicted RBP7.61□□□□□ -1.19
BEST3-209ENST00000548658 Q8N814 137 aa7.61□□□□□ -1.19
BEST3-209ENST00000548658 OR10G8Q8NGN5 311 aa7.61□□□□□ -1.19
BEST3-209ENST00000548658 OR10AG1Q8NH19 301 aa7.61□□□□□ -1.19
BEST3-209ENST00000548658 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
BEST3-209ENST00000548658 XKRY2A2RUG3 117 aa7.6□□□□□ -1.19
BEST3-209ENST00000548658 F5H697 171 aa7.6□□□□□ -1.19
BEST3-209ENST00000548658 GNG4P50150 75 aa7.6□□□□□ -1.19
BEST3-209ENST00000548658 UBE2D3P61077 147 aa7.6□□□□□ -1.19
BEST3-209ENST00000548658 UBE2D2P62837 147 aa7.6□□□□□ -1.19
BEST3-209ENST00000548658 ZNF56Q15929 161 aa7.6□□□□□ -1.19
BEST3-209ENST00000548658 DAZ4Q86SG3 579 aaKnown RBP7.6□□□□□ -1.19
BEST3-209ENST00000548658 NIT1Q86X76 327 aa7.6□□□□□ -1.19
BEST3-209ENST00000548658 DAZ3Q9NR90 486 aaKnown RBP7.6□□□□□ -1.19
BEST3-209ENST00000548658 FUSP35637 526 aaKnown RBP eCLIP7.59□□□□□ -1.19
BEST3-209ENST00000548658 KRTAP10-1P60331 282 aa7.59□□□□□ -1.19
BEST3-209ENST00000548658 PKIAP61925 76 aa7.59□□□□□ -1.19
BEST3-209ENST00000548658 TMEM97Q5BJF2 176 aa7.59□□□□□ -1.19
BEST3-209ENST00000548658 CENPWQ5EE01 88 aa7.59□□□□□ -1.19
BEST3-209ENST00000548658 AP1S3Q96PC3 154 aa7.59□□□□□ -1.19
BEST3-209ENST00000548658 DERL1Q9BUN8 251 aa7.59□□□□□ -1.19
BEST3-209ENST00000548658 MED9Q9NWA0 146 aa7.59□□□□□ -1.19
BEST3-209ENST00000548658 VAX2Q9UIW0 290 aa7.59□□□□□ -1.19
BEST3-209ENST00000548658 DNAH5Q8TE73 4624 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms