RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 ANKRD17O75179 2603 aaKnown RBP0.47□□□□□ -2.33
RPAP3-206ENST00000548296 CACNA1EQ15878 2313 aa0.47□□□□□ -2.33
RPAP3-206ENST00000548296 FSIP2Q5CZC0 6907 aa0.47□□□□□ -2.33
RPAP3-206ENST00000548296 RBAKDNA6NC62 111 aa0.46□□□□□ -2.34
RPAP3-206ENST00000548296 CYP2G1PQ6ZSU1 146 aa0.46□□□□□ -2.34
RPAP3-206ENST00000548296 NDUFA12Q9UI09 145 aa0.46□□□□□ -2.34
RPAP3-206ENST00000548296 USP24Q9UPU5 2620 aa0.46□□□□□ -2.34
RPAP3-206ENST00000548296 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
RPAP3-206ENST00000548296 PITX3O75364 302 aa0.45□□□□□ -2.34
RPAP3-206ENST00000548296 CCL3L1P16619 93 aa0.45□□□□□ -2.34
RPAP3-206ENST00000548296 NPC2P61916 151 aa0.45□□□□□ -2.34
RPAP3-206ENST00000548296 SMCO1Q147U7 214 aa0.45□□□□□ -2.34
RPAP3-206ENST00000548296 MIC13Q5XKP0 118 aa0.45□□□□□ -2.34
RPAP3-206ENST00000548296 NEBP20929 6669 aa0.44□□□□□ -2.34
RPAP3-206ENST00000548296 PHIPQ8WWQ0 1821 aa0.44□□□□□ -2.34
RPAP3-206ENST00000548296 NPFFO15130 113 aa0.44□□□□□ -2.34
RPAP3-206ENST00000548296 SSBP1Q04837 148 aaKnown RBP0.44□□□□□ -2.34
RPAP3-206ENST00000548296 SPCS2Q15005 226 aa0.44□□□□□ -2.34
RPAP3-206ENST00000548296 SPANXN1Q5VSR9 72 aa0.44□□□□□ -2.34
RPAP3-206ENST00000548296 TNS1Q9HBL0 1735 aaKnown RBP0.44□□□□□ -2.34
RPAP3-206ENST00000548296 MUC22E2RYF6 1773 aaPredicted RBP0.43□□□□□ -2.34
RPAP3-206ENST00000548296 A0A087WTM6 91 aa0.43□□□□□ -2.34
RPAP3-206ENST00000548296 TRAV12-3A0A0B4J271 114 aa0.43□□□□□ -2.34
RPAP3-206ENST00000548296 M0R129 80 aa0.43□□□□□ -2.34
RPAP3-206ENST00000548296 SCIMPQ6UWF3 145 aa0.43□□□□□ -2.34
RPAP3-206ENST00000548296 Q6ZUT4 128 aa0.43□□□□□ -2.34
RPAP3-206ENST00000548296 TMEM2Q9UHN6 1383 aa0.43□□□□□ -2.34
RPAP3-206ENST00000548296 SYNE1Q8NF91 8797 aaKnown RBP0.42□□□□□ -2.34
RPAP3-206ENST00000548296 NRXN2Q9P2S2 1712 aa0.42□□□□□ -2.34
RPAP3-206ENST00000548296 K7ERU9 68 aa0.42□□□□□ -2.34
RPAP3-206ENST00000548296 SLC48A1Q6P1K1 146 aa0.42□□□□□ -2.34
RPAP3-206ENST00000548296 VMO1Q7Z5L0 202 aa0.42□□□□□ -2.34
RPAP3-206ENST00000548296 TSTD1Q8NFU3 115 aa0.42□□□□□ -2.34
RPAP3-206ENST00000548296 PARP14Q460N5 1801 aa0.42□□□□□ -2.34
RPAP3-206ENST00000548296 CDK13Q14004 1512 aaKnown RBP0.42□□□□□ -2.34
RPAP3-206ENST00000548296 TTC28Q96AY4 2481 aa0.41□□□□□ -2.34
RPAP3-206ENST00000548296 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
RPAP3-206ENST00000548296 PIRTP0C851 137 aa0.41□□□□□ -2.34
RPAP3-206ENST00000548296 COX4I1P13073 169 aa0.41□□□□□ -2.34
RPAP3-206ENST00000548296 RPS25P62851 125 aaKnown RBP0.41□□□□□ -2.34
RPAP3-206ENST00000548296 C9orf116Q5BN46 136 aaPredicted RBP0.41□□□□□ -2.34
RPAP3-206ENST00000548296 SPINK6Q6UWN8 80 aa0.41□□□□□ -2.34
RPAP3-206ENST00000548296 C20orf197Q8N268 126 aa0.41□□□□□ -2.34
RPAP3-206ENST00000548296 COX7B2Q8TF08 81 aa0.41□□□□□ -2.34
RPAP3-206ENST00000548296 BPESC1Q9GZL8 116 aa0.41□□□□□ -2.34
RPAP3-206ENST00000548296 PAIP2BQ9ULR5 123 aaKnown RBP0.41□□□□□ -2.34
RPAP3-206ENST00000548296 BDP1A6H8Y1 2624 aa0.4□□□□□ -2.34
RPAP3-206ENST00000548296 F5P12259 2224 aa0.4□□□□□ -2.35
RPAP3-206ENST00000548296 KDM6BO15054 1643 aa0.4□□□□□ -2.35
RPAP3-206ENST00000548296 F2Z2F3 143 aa0.4□□□□□ -2.35
RPAP3-206ENST00000548296 COPZ1P61923 177 aa0.4□□□□□ -2.35
RPAP3-206ENST00000548296 RRAS2P62070 204 aaPredicted RBP0.4□□□□□ -2.35
RPAP3-206ENST00000548296 FAM74A4Q5TZK3 123 aa0.4□□□□□ -2.35
RPAP3-206ENST00000548296 PRR15LQ9BU68 103 aa0.4□□□□□ -2.35
RPAP3-206ENST00000548296 PROK2Q9HC23 129 aa0.4□□□□□ -2.35
RPAP3-206ENST00000548296 JMJD1CQ15652 2540 aa0.39□□□□□ -2.35
RPAP3-206ENST00000548296 GVQW2A0A096LPI5 108 aaPredicted RBP0.39□□□□□ -2.35
RPAP3-206ENST00000548296 GUCA1AP43080 201 aaPredicted RBP0.39□□□□□ -2.35
RPAP3-206ENST00000548296 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.39□□□□□ -2.35
RPAP3-206ENST00000548296 C4orf33Q8N1A6 199 aa0.39□□□□□ -2.35
RPAP3-206ENST00000548296 SDF2Q99470 211 aa0.39□□□□□ -2.35
RPAP3-206ENST00000548296 PFDN5Q99471 154 aa0.39□□□□□ -2.35
RPAP3-206ENST00000548296 PSMG3Q9BT73 122 aaPredicted RBP0.39□□□□□ -2.35
RPAP3-206ENST00000548296 SOGA1O94964 1423 aa0.38□□□□□ -2.35
RPAP3-206ENST00000548296 TCEAL4Q96EI5 215 aa0.38□□□□□ -2.35
RPAP3-206ENST00000548296 Q96NJ1 140 aa0.38□□□□□ -2.35
RPAP3-206ENST00000548296 TMEM191AQ9H0A3 160 aa0.38□□□□□ -2.35
RPAP3-206ENST00000548296 V9GYV3 84 aa0.38□□□□□ -2.35
RPAP3-206ENST00000548296 DAPK1P53355 1430 aa0.38□□□□□ -2.35
RPAP3-206ENST00000548296 LAMC3Q9Y6N6 1575 aa0.37□□□□□ -2.35
RPAP3-206ENST00000548296 NAV2Q8IVL1 2488 aa0.37□□□□□ -2.35
RPAP3-206ENST00000548296 SMIM11BQ8TCY0 68 aa0.37□□□□□ -2.35
RPAP3-206ENST00000548296 TPT1P8Q9HAU6 139 aa0.37□□□□□ -2.35
RPAP3-206ENST00000548296 RPRMQ9NS64 109 aa0.37□□□□□ -2.35
RPAP3-206ENST00000548296 TMEM242Q9NWH2 141 aa0.37□□□□□ -2.35
RPAP3-206ENST00000548296 TRBV7-1A0A0A6YYK4 115 aa0.36□□□□□ -2.35
RPAP3-206ENST00000548296 PIPP12273 146 aaPredicted RBP0.36□□□□□ -2.35
RPAP3-206ENST00000548296 ARFGEF1Q9Y6D6 1849 aa0.36□□□□□ -2.35
RPAP3-206ENST00000548296 MYO7AQ13402 2215 aa0.36□□□□□ -2.35
RPAP3-206ENST00000548296 CACNA1HO95180 2353 aa0.35□□□□□ -2.35
RPAP3-206ENST00000548296 IFNA17P01571 189 aa0.35□□□□□ -2.35
RPAP3-206ENST00000548296 IL5P05113 134 aa0.35□□□□□ -2.35
RPAP3-206ENST00000548296 UBE2D1P51668 147 aa0.35□□□□□ -2.35
RPAP3-206ENST00000548296 C10orf82Q8WW14 230 aa0.35□□□□□ -2.35
RPAP3-206ENST00000548296 SSC5DA1L4H1 1573 aa0.35□□□□□ -2.35
RPAP3-206ENST00000548296 DOCK11Q5JSL3 2073 aa0.34□□□□□ -2.35
RPAP3-206ENST00000548296 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.35
RPAP3-206ENST00000548296 A6NIN4 97 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 NDUFB6O95139 128 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 CBLN1P23435 193 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 UBE2G1P62253 170 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 S100A12P80511 92 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 MYOM3Q5VTT5 1437 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 KCNRGQ8N5I3 272 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 SPTSSAQ969W0 71 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 CCDC167Q9P0B6 97 aa0.34□□□□□ -2.36
RPAP3-206ENST00000548296 SIPA1L3O60292 1781 aaPredicted RBP0.34□□□□□ -2.36
RPAP3-206ENST00000548296 BICRAQ9NZM4 1560 aa0.33□□□□□ -2.36
RPAP3-206ENST00000548296 CLPSL1A2RUU4 121 aa0.33□□□□□ -2.36
RPAP3-206ENST00000548296 RPL7L1Q6DKI1 246 aaKnown RBP0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms