RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 NPC2P61916 151 aa10.84□□□□□ -0.67
RAPGEF3-216ENST00000547856 PRR9Q5T870 116 aa10.84□□□□□ -0.67
RAPGEF3-216ENST00000547856 CD3EP07766 207 aa10.84□□□□□ -0.67
RAPGEF3-216ENST00000547856 CTSGP08311 255 aa10.84□□□□□ -0.67
RAPGEF3-216ENST00000547856 C5orf47Q569G3 176 aa10.84□□□□□ -0.67
RAPGEF3-216ENST00000547856 OPRPNQ99935 248 aaPredicted RBP10.84□□□□□ -0.67
RAPGEF3-216ENST00000547856 PRSS2P07478 247 aa10.83□□□□□ -0.68
RAPGEF3-216ENST00000547856 DNAJC30Q96LL9 226 aa10.83□□□□□ -0.68
RAPGEF3-216ENST00000547856 ZNF580Q9UK33 172 aa10.83□□□□□ -0.68
RAPGEF3-216ENST00000547856 NPFFO15130 113 aa10.83□□□□□ -0.68
RAPGEF3-216ENST00000547856 HERVK_113P63121 156 aa10.83□□□□□ -0.68
RAPGEF3-216ENST00000547856 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.83□□□□□ -0.68
RAPGEF3-216ENST00000547856 ARHGAP32A7KAX9 2087 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 IGLV11-55A0A075B6I3 123 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 Q8NA96 180 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 EEF1AKMT3Q96AZ1 226 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 DPH3P1Q9H4G8 78 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 PHLDA3Q9Y5J5 127 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 A0A0B4J2C4 111 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 RBAKDNA6NC62 111 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 NDUFA7O95182 113 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 NBL1P41271 181 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 UBE2E1P51965 193 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 FAM19A5Q7Z5A7 132 aaPredicted RBP10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 UBTD1Q9HAC8 227 aa10.82□□□□□ -0.68
RAPGEF3-216ENST00000547856 SMIM9A6NGZ8 99 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 NBR2O15453 112 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 PAPPA-AS1Q5QFB9 102 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 NUP37Q8NFH4 326 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 IGHV4-4A0A075B6R2 117 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 EDA2RQ9HAV5 297 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 TLN1Q9Y490 2541 aaKnown RBP10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 M0R2P5 195 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 DEFB1P60022 68 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 BSPH1Q075Z2 132 aa10.81□□□□□ -0.68
RAPGEF3-216ENST00000547856 NDPQ00604 133 aa10.8□□□□□ -0.68
RAPGEF3-216ENST00000547856 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
RAPGEF3-216ENST00000547856 TRAV8-3A0A0A6YYJ7 113 aa10.8□□□□□ -0.68
RAPGEF3-216ENST00000547856 LYNX1G3V0Z9 82 aa10.8□□□□□ -0.68
RAPGEF3-216ENST00000547856 LYNX1P0DP58 116 aa10.8□□□□□ -0.68
RAPGEF3-216ENST00000547856 C3orf22Q8N5N4 141 aa10.8□□□□□ -0.68
RAPGEF3-216ENST00000547856 RELNP78509 3460 aa10.8□□□□□ -0.68
RAPGEF3-216ENST00000547856 ICOSQ9Y6W8 199 aa10.79□□□□□ -0.68
RAPGEF3-216ENST00000547856 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.79□□□□□ -0.68
RAPGEF3-216ENST00000547856 TRBV7-7A0A0K0K1E9 115 aa10.79□□□□□ -0.68
RAPGEF3-216ENST00000547856 EBI3Q14213 229 aa10.79□□□□□ -0.68
RAPGEF3-216ENST00000547856 GPHB5Q86YW7 130 aa10.79□□□□□ -0.68
RAPGEF3-216ENST00000547856 GNRH2O43555 120 aa10.78□□□□□ -0.68
RAPGEF3-216ENST00000547856 BUB3O43684 328 aa10.78□□□□□ -0.68
RAPGEF3-216ENST00000547856 POM121L12Q8N7R1 296 aa10.78□□□□□ -0.68
RAPGEF3-216ENST00000547856 TRBV30A0A0K0K1B3 111 aa10.78□□□□□ -0.68
RAPGEF3-216ENST00000547856 METTL26Q96S19 204 aa10.78□□□□□ -0.68
RAPGEF3-216ENST00000547856 JPT2Q9H910 190 aa10.78□□□□□ -0.68
RAPGEF3-216ENST00000547856 LRBAP50851 2863 aa10.78□□□□□ -0.68
RAPGEF3-216ENST00000547856 TRAV41A0A0B4J266 112 aa10.77□□□□□ -0.69
RAPGEF3-216ENST00000547856 ASCL5Q7RTU5 278 aa10.77□□□□□ -0.69
RAPGEF3-216ENST00000547856 F5H697 171 aa10.77□□□□□ -0.69
RAPGEF3-216ENST00000547856 ZNF256Q9Y2P7 627 aaPredicted RBP10.77□□□□□ -0.69
RAPGEF3-216ENST00000547856 CACNA1BQ00975 2339 aa10.77□□□□□ -0.69
RAPGEF3-216ENST00000547856 TMEM223A0PJW6 202 aa10.76□□□□□ -0.69
RAPGEF3-216ENST00000547856 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
RAPGEF3-216ENST00000547856 DUX5Q96PT3 197 aa10.76□□□□□ -0.69
RAPGEF3-216ENST00000547856 PTPRQQ9UMZ3 2332 aa10.76□□□□□ -0.69
RAPGEF3-216ENST00000547856 DCHS2Q6V1P9 2916 aa10.76□□□□□ -0.69
RAPGEF3-216ENST00000547856 A0A087WWL8 130 aa10.75□□□□□ -0.69
RAPGEF3-216ENST00000547856 J3KT08 172 aa10.75□□□□□ -0.69
RAPGEF3-216ENST00000547856 LEPROTO15243 131 aa10.75□□□□□ -0.69
RAPGEF3-216ENST00000547856 SMCR5Q8TEV8 140 aa10.75□□□□□ -0.69
RAPGEF3-216ENST00000547856 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
RAPGEF3-216ENST00000547856 COX6CP09669 75 aa10.75□□□□□ -0.69
RAPGEF3-216ENST00000547856 PF4V1P10720 104 aa10.75□□□□□ -0.69
RAPGEF3-216ENST00000547856 A0A0J9YXY3 114 aa10.74□□□□□ -0.69
RAPGEF3-216ENST00000547856 H3BT86 120 aa10.74□□□□□ -0.69
RAPGEF3-216ENST00000547856 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
RAPGEF3-216ENST00000547856 DYNLRB1Q9NP97 96 aa10.74□□□□□ -0.69
RAPGEF3-216ENST00000547856 CLPSL1A2RUU4 121 aa10.74□□□□□ -0.69
RAPGEF3-216ENST00000547856 RNASE4P34096 147 aaKnown RBP10.74□□□□□ -0.69
RAPGEF3-216ENST00000547856 SPXQ9BT56 116 aa10.74□□□□□ -0.69
RAPGEF3-216ENST00000547856 IGHV1-69DA0A0B4J2H0 117 aa10.73□□□□□ -0.69
RAPGEF3-216ENST00000547856 A0A0J9YXV3 536 aa10.73□□□□□ -0.69
RAPGEF3-216ENST00000547856 C15orf32Q32M92 178 aa10.73□□□□□ -0.69
RAPGEF3-216ENST00000547856 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
RAPGEF3-216ENST00000547856 FAM240AA0A1B0GVK7 77 aa10.73□□□□□ -0.69
RAPGEF3-216ENST00000547856 UQCRQO14949 82 aa10.73□□□□□ -0.69
RAPGEF3-216ENST00000547856 ADAMTSL4-AS1Q5T5F5 129 aa10.73□□□□□ -0.69
RAPGEF3-216ENST00000547856 RNF5Q99942 180 aa10.73□□□□□ -0.69
RAPGEF3-216ENST00000547856 I3L3M4 83 aa10.72□□□□□ -0.69
RAPGEF3-216ENST00000547856 CLEC19AQ6UXS0 136 aa10.72□□□□□ -0.69
RAPGEF3-216ENST00000547856 RNASE6Q93091 150 aaKnown RBP10.72□□□□□ -0.69
RAPGEF3-216ENST00000547856 SDHAF1A6NFY7 115 aa10.72□□□□□ -0.69
RAPGEF3-216ENST00000547856 LY6LH3BQJ8 138 aa10.72□□□□□ -0.69
RAPGEF3-216ENST00000547856 FAM74A4Q5TZK3 123 aa10.72□□□□□ -0.69
RAPGEF3-216ENST00000547856 C9orf47Q6ZRZ4 202 aa10.72□□□□□ -0.69
RAPGEF3-216ENST00000547856 ZFAND3Q9H8U3 227 aa10.72□□□□□ -0.69
RAPGEF3-216ENST00000547856 E7EQL1 145 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 ECSCRQ19T08 205 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 GAGE2AQ6NT46 116 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 LINC00526Q96FQ7 95 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms