RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PRSS29PA6NIE9 313 aa12.81□□□□□ -0.36
PRPF40B-206ENST00000547764 P01737 135 aa12.81□□□□□ -0.36
PRPF40B-206ENST00000547764 GZMBP10144 247 aa12.81□□□□□ -0.36
PRPF40B-206ENST00000547764 TEX261Q6UWH6 196 aa12.81□□□□□ -0.36
PRPF40B-206ENST00000547764 C6orf223Q8N319 242 aa12.81□□□□□ -0.36
PRPF40B-206ENST00000547764 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-206ENST00000547764 OCC1Q8TAD7 63 aa12.81□□□□□ -0.36
PRPF40B-206ENST00000547764 FAM210AQ96ND0 272 aa12.81□□□□□ -0.36
PRPF40B-206ENST00000547764 A0A1W2PPQ1 181 aa12.8□□□□□ -0.36
PRPF40B-206ENST00000547764 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-206ENST00000547764 SPANXN1Q5VSR9 72 aa12.8□□□□□ -0.36
PRPF40B-206ENST00000547764 Q9UF83 564 aa12.8□□□□□ -0.36
PRPF40B-206ENST00000547764 K7EN84 100 aa12.79□□□□□ -0.36
PRPF40B-206ENST00000547764 CEBPGP53567 150 aa12.79□□□□□ -0.36
PRPF40B-206ENST00000547764 TIRAPP58753 221 aa12.79□□□□□ -0.36
PRPF40B-206ENST00000547764 SSTP61278 116 aa12.79□□□□□ -0.36
PRPF40B-206ENST00000547764 WFDC10BQ8IUB3 73 aa12.79□□□□□ -0.36
PRPF40B-206ENST00000547764 NUDT10Q8NFP7 164 aa12.79□□□□□ -0.36
PRPF40B-206ENST00000547764 NUDT11Q96G61 164 aa12.79□□□□□ -0.36
PRPF40B-206ENST00000547764 HECTD4Q9Y4D8 3996 aa12.79□□□□□ -0.36
PRPF40B-206ENST00000547764 GAGE12JA6NER3 117 aa12.78□□□□□ -0.36
PRPF40B-206ENST00000547764 IGLC6P0CF74 106 aa12.78□□□□□ -0.36
PRPF40B-206ENST00000547764 GAGE1Q13065 139 aa12.78□□□□□ -0.36
PRPF40B-206ENST00000547764 GAGE4Q13068 117 aa12.78□□□□□ -0.36
PRPF40B-206ENST00000547764 GAGE5Q13069 117 aa12.78□□□□□ -0.36
PRPF40B-206ENST00000547764 GAGE13Q4V321 117 aa12.78□□□□□ -0.36
PRPF40B-206ENST00000547764 FER1L6-AS1Q8NA97 138 aa12.78□□□□□ -0.36
PRPF40B-206ENST00000547764 ATP6V0E2Q8NHE4 81 aa12.78□□□□□ -0.36
PRPF40B-206ENST00000547764 XKRY2A2RUG3 117 aa12.77□□□□□ -0.37
PRPF40B-206ENST00000547764 NDUFS6O75380 124 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-206ENST00000547764 LINC00694P0DN24 101 aa12.77□□□□□ -0.37
PRPF40B-206ENST00000547764 TPPP3Q9BW30 176 aa12.77□□□□□ -0.37
PRPF40B-206ENST00000547764 A0A1B0GVY2 172 aa12.76□□□□□ -0.37
PRPF40B-206ENST00000547764 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-206ENST00000547764 GTSF1LQ9H1H1 148 aa12.76□□□□□ -0.37
PRPF40B-206ENST00000547764 LY96Q9Y6Y9 160 aa12.76□□□□□ -0.37
PRPF40B-206ENST00000547764 SRP19P09132 144 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-206ENST00000547764 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
PRPF40B-206ENST00000547764 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
PRPF40B-206ENST00000547764 RPP21Q9H633 154 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-206ENST00000547764 F2Z2F3 143 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 RAB4BP61018 213 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 CACNG7P62955 275 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 TNP2Q05952 138 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 ZNF56Q15929 161 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 LELP1Q5T871 98 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 LYZL1Q6UWQ5 148 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 MSRB1Q9NZV6 116 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
PRPF40B-206ENST00000547764 PKD1P98161 4303 aa12.72□□□□□ -0.37
PRPF40B-206ENST00000547764 TRAV9-2A0A087WT02 112 aa12.72□□□□□ -0.37
PRPF40B-206ENST00000547764 TRAV8-6A0A0B4J262 113 aa12.72□□□□□ -0.37
PRPF40B-206ENST00000547764 TRBV10-1A0A0K0K1A3 114 aa12.72□□□□□ -0.37
PRPF40B-206ENST00000547764 LINC00315P59091 139 aa12.72□□□□□ -0.37
PRPF40B-206ENST00000547764 OR10J3Q5JRS4 329 aa12.72□□□□□ -0.37
PRPF40B-206ENST00000547764 AP1S3Q96PC3 154 aa12.72□□□□□ -0.37
PRPF40B-206ENST00000547764 IGHV3-38A0A0C4DH36 116 aa12.71□□□□□ -0.37
PRPF40B-206ENST00000547764 ZNF727A8MUV8 499 aa12.71□□□□□ -0.37
PRPF40B-206ENST00000547764 SMIM17P0DL12 118 aa12.71□□□□□ -0.37
PRPF40B-206ENST00000547764 EVI2AP22794 236 aa12.71□□□□□ -0.37
PRPF40B-206ENST00000547764 F5H697 171 aa12.7□□□□□ -0.38
PRPF40B-206ENST00000547764 K7EP13 123 aa12.7□□□□□ -0.38
PRPF40B-206ENST00000547764 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
PRPF40B-206ENST00000547764 LINC01551Q86U37 167 aa12.7□□□□□ -0.38
PRPF40B-206ENST00000547764 TNFRSF18Q9Y5U5 241 aa12.7□□□□□ -0.38
PRPF40B-206ENST00000547764 C9JQL5 133 aa12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 GATCO43716 136 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 NTF3P20783 257 aa12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 CTRLP40313 264 aa12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 SRSF3P84103 164 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 OR10G8Q8NGN5 311 aa12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 DNAH11Q96DT5 4516 aa12.69□□□□□ -0.38
PRPF40B-206ENST00000547764 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
PRPF40B-206ENST00000547764 ERVFC1-1P60608 527 aa12.68□□□□□ -0.38
PRPF40B-206ENST00000547764 UBE2D3P61077 147 aa12.68□□□□□ -0.38
PRPF40B-206ENST00000547764 UBE2D2P62837 147 aa12.68□□□□□ -0.38
PRPF40B-206ENST00000547764 LINC01556Q5JQF7 62 aa12.68□□□□□ -0.38
PRPF40B-206ENST00000547764 WDR73Q6P4I2 378 aa12.68□□□□□ -0.38
PRPF40B-206ENST00000547764 NEXN-AS1Q8NBZ9 246 aa12.68□□□□□ -0.38
PRPF40B-206ENST00000547764 GTSF1Q8WW33 167 aa12.68□□□□□ -0.38
PRPF40B-206ENST00000547764 PKHD1P08F94 4074 aa12.67□□□□□ -0.38
PRPF40B-206ENST00000547764 A0A087WWC5 75 aa12.67□□□□□ -0.38
PRPF40B-206ENST00000547764 PEA15Q15121 130 aa12.67□□□□□ -0.38
PRPF40B-206ENST00000547764 Q6ZRN7 208 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-206ENST00000547764 C10orf126Q8N4M7 172 aa12.67□□□□□ -0.38
PRPF40B-206ENST00000547764 CNFNQ9BYD5 112 aa12.67□□□□□ -0.38
PRPF40B-206ENST00000547764 DYNC1H1Q14204 4646 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-206ENST00000547764 A8MWL6 223 aa12.66□□□□□ -0.38
PRPF40B-206ENST00000547764 MGPP08493 103 aa12.66□□□□□ -0.38
PRPF40B-206ENST00000547764 TRGC1P0CF51 173 aa12.66□□□□□ -0.38
PRPF40B-206ENST00000547764 FAM74A3Q4VXF1 159 aa12.66□□□□□ -0.38
PRPF40B-206ENST00000547764 IGHV3-30P01768 117 aa12.65□□□□□ -0.38
PRPF40B-206ENST00000547764 IGHV3-33P01772 117 aa12.65□□□□□ -0.38
PRPF40B-206ENST00000547764 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
PRPF40B-206ENST00000547764 IGHV3-30-5P0DP03 117 aa12.65□□□□□ -0.38
PRPF40B-206ENST00000547764 TMEM241Q24JQ0 296 aa12.65□□□□□ -0.38
PRPF40B-206ENST00000547764 CT83Q5H943 113 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms