RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 NDUFA12Q9UI09 145 aa0.7□□□□□ -2.3
CPNE8-205ENST00000547417 KIF13AQ9H1H9 1805 aa0.7□□□□□ -2.3
CPNE8-205ENST00000547417 KDM6BO15054 1643 aa0.7□□□□□ -2.3
CPNE8-205ENST00000547417 MYH9P35579 1960 aaKnown RBP0.7□□□□□ -2.3
CPNE8-205ENST00000547417 IBTKQ9P2D0 1353 aaPredicted RBP0.7□□□□□ -2.3
CPNE8-205ENST00000547417 RREB1Q92766 1687 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 ZNF518AQ6AHZ1 1483 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 PIGBOS1A0A0B4J2F0 54 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 TCRBV3S1A0A5B6 114 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 NDUFB6O95139 128 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 IFNA17P01571 189 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 KLKP1Q107X0 134 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 SPINK13Q1W4C9 94 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 C12orf73Q69YU5 71 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 RPL7L1Q6DKI1 246 aaKnown RBP0.69□□□□□ -2.3
CPNE8-205ENST00000547417 CYP2G1PQ6ZSU1 146 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 Q86TA4 180 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.69□□□□□ -2.3
CPNE8-205ENST00000547417 RERGLQ9H628 205 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 NAA60Q9H7X0 242 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 RPRMQ9NS64 109 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 COA4Q9NYJ1 87 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 ZNF462Q96JM2 2506 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 FAM135AQ9P2D6 1515 aa0.69□□□□□ -2.3
CPNE8-205ENST00000547417 ESPL1Q14674 2120 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 APCP25054 2843 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 A6NIN4 97 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 K7EIL1 84 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 CITO14578 2027 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 DLEU1O43261 78 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 SNCGO76070 127 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 CBLN1P23435 193 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 ZNF56Q15929 161 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 MEIG1Q5JSS6 88 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 Q8N6K4 173 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 IFI27L1Q96BM0 104 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 C2orf88Q9BSF0 95 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 BET1LQ9NYM9 111 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 SERP1Q9Y6X1 66 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 AFDNP55196 1824 aaKnown RBP0.68□□□□□ -2.3
CPNE8-205ENST00000547417 FOCADQ5VW36 1801 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 SPEF2Q9C093 1822 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 NAV3Q8IVL0 2385 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 MYH7P12883 1935 aa0.68□□□□□ -2.3
CPNE8-205ENST00000547417 ZNF469Q96JG9 3925 aaPredicted RBP0.67□□□□□ -2.3
CPNE8-205ENST00000547417 LAMA4Q16363 1823 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 TRAV12-3A0A0B4J271 114 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 MCRIP1C9JLW8 97 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 PRB4P10163 310 aaPredicted RBP0.67□□□□□ -2.3
CPNE8-205ENST00000547417 SSBP1Q04837 148 aaKnown RBP0.67□□□□□ -2.3
CPNE8-205ENST00000547417 C9orf116Q5BN46 136 aaPredicted RBP0.67□□□□□ -2.3
CPNE8-205ENST00000547417 Q6AWC8 147 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 TSKUQ8WUA8 353 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 TMEM203Q969S6 136 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 AGPAT4-IT1Q9H0P7 198 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 TMEM14BQ9NUH8 114 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 A2ML1A8K2U0 1454 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 BCORL1Q5H9F3 1711 aa0.67□□□□□ -2.3
CPNE8-205ENST00000547417 RIMS1Q86UR5 1692 aaKnown RBP0.66□□□□□ -2.3
CPNE8-205ENST00000547417 ABCA1O95477 2261 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 A0A1B0GV90 55 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 RBAKDNA6NC62 111 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 FXYD1O00168 92 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 AKAIN1P0CW23 69 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 CCL3L1P16619 93 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 WHAMMP3Q1A5X7 153 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 C4orf33Q8N1A6 199 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 PP6455Q8WZ26 134 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 SPANXDQ9BXN6 97 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 SEC11CQ9BY50 192 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 KTN1Q86UP2 1357 aaKnown RBP0.66□□□□□ -2.3
CPNE8-205ENST00000547417 IFT140Q96RY7 1462 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 BDP1A6H8Y1 2624 aa0.66□□□□□ -2.3
CPNE8-205ENST00000547417 PLXNA1Q9UIW2 1896 aa0.65□□□□□ -2.3
CPNE8-205ENST00000547417 TRBV10-3A0A0K0K1G6 114 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 LINC00587B1AMM8 73 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 IFNGP01579 166 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 HIST1H1DP16402 221 aaKnown RBP0.65□□□□□ -2.31
CPNE8-205ENST00000547417 NPC2P61916 151 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 Q56UQ5 140 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 FAM74A4Q5TZK3 123 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 ZNF818PQ6ZRF7 136 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 PLAC4Q8WY50 150 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 DSCR8Q96T75 97 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 PXDNQ92626 1479 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 QRICH2Q9H0J4 1663 aa0.65□□□□□ -2.31
CPNE8-205ENST00000547417 MED13LQ71F56 2210 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 PIEZO1Q92508 2521 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 A0A096LNT2 108 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 TRBV7-1A0A0A6YYK4 115 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 APOC4-APOC2K7ER74 178 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 TNFP01375 233 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 APOC2P02655 101 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 TFF1P04155 84 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 UBE2D1P51668 147 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 RPL37P61927 97 aaKnown RBP0.64□□□□□ -2.31
CPNE8-205ENST00000547417 UBE2G1P62253 170 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 CCL8P80075 99 aa0.64□□□□□ -2.31
CPNE8-205ENST00000547417 MRPS10P82664 201 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms