RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 FAM231DQ6ZW35 169 aa7.45□□□□□ -1.22
GCN1-202ENST00000547263 C6orf223Q8N319 242 aa7.45□□□□□ -1.22
GCN1-202ENST00000547263 PCNPQ8WW12 178 aaKnown RBP7.45□□□□□ -1.22
GCN1-202ENST00000547263 Q9UF83 564 aa7.45□□□□□ -1.22
GCN1-202ENST00000547263 IGHV3-73A0A0B4J1V6 119 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 TRBV10-1A0A0K0K1A3 114 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 M0R381 172 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 SIVA1O15304 175 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 CTRLP40313 264 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 TOR2AQ5JU69 321 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 WDR73Q6P4I2 378 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
GCN1-202ENST00000547263 C14orf178Q8N769 122 aaPredicted RBP7.44□□□□□ -1.22
GCN1-202ENST00000547263 NUDT10Q8NFP7 164 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 OR10G8Q8NGN5 311 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 NUDT11Q96G61 164 aa7.44□□□□□ -1.22
GCN1-202ENST00000547263 PRSS29PA6NIE9 313 aa7.43□□□□□ -1.22
GCN1-202ENST00000547263 WFDC10BQ8IUB3 73 aa7.43□□□□□ -1.22
GCN1-202ENST00000547263 OR2D3Q8NGH3 330 aa7.43□□□□□ -1.22
GCN1-202ENST00000547263 DNAH10Q8IVF4 4471 aa7.43□□□□□ -1.22
GCN1-202ENST00000547263 EPPK1P58107 5090 aaKnown RBP7.42□□□□□ -1.22
GCN1-202ENST00000547263 F2Z2F3 143 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 P01737 135 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 GZMBP10144 247 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 RAB4BP61018 213 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 SOHLH1Q5JUK2 328 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 LELP1Q5T871 98 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 FER1L6-AS1Q8NA97 138 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 DAZAP1Q96EP5 407 aaKnown RBP7.42□□□□□ -1.22
GCN1-202ENST00000547263 GTSF1LQ9H1H1 148 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
GCN1-202ENST00000547263 A0A087WWL8 130 aa7.41□□□□□ -1.22
GCN1-202ENST00000547263 XKRY2A2RUG3 117 aa7.41□□□□□ -1.22
GCN1-202ENST00000547263 C9JQL5 133 aa7.41□□□□□ -1.22
GCN1-202ENST00000547263 FOXA3P55318 350 aaPredicted RBP7.41□□□□□ -1.22
GCN1-202ENST00000547263 CACNG7P62955 275 aa7.41□□□□□ -1.22
GCN1-202ENST00000547263 CT83Q5H943 113 aa7.41□□□□□ -1.22
GCN1-202ENST00000547263 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
GCN1-202ENST00000547263 LINC01551Q86U37 167 aa7.41□□□□□ -1.22
GCN1-202ENST00000547263 RNASE7Q9H1E1 156 aaKnown RBP7.41□□□□□ -1.22
GCN1-202ENST00000547263 RPP21Q9H633 154 aaKnown RBP7.41□□□□□ -1.22
GCN1-202ENST00000547263 HECTD4Q9Y4D8 3996 aa7.41□□□□□ -1.22
GCN1-202ENST00000547263 FAT2Q9NYQ8 4349 aa7.4□□□□□ -1.22
GCN1-202ENST00000547263 UBE2D3P61077 147 aa7.4□□□□□ -1.22
GCN1-202ENST00000547263 UBE2D2P62837 147 aa7.4□□□□□ -1.22
GCN1-202ENST00000547263 FAM74A4Q5TZK3 123 aa7.4□□□□□ -1.22
GCN1-202ENST00000547263 GTSF1Q8WW33 167 aa7.4□□□□□ -1.22
GCN1-202ENST00000547263 AP1S3Q96PC3 154 aa7.4□□□□□ -1.22
GCN1-202ENST00000547263 EIF5A2Q9GZV4 153 aaKnown RBP7.4□□□□□ -1.22
GCN1-202ENST00000547263 DNAH17Q9UFH2 4485 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 TRBV7-3A0A075B6L6 115 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 IGHV3-38A0A0C4DH36 116 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 GAGE12JA6NER3 117 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 SRSF3P84103 164 aaKnown RBP7.39□□□□□ -1.23
GCN1-202ENST00000547263 TNP2Q05952 138 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 GAGE1Q13065 139 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 GAGE4Q13068 117 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 GAGE5Q13069 117 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 GAGE13Q4V321 117 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 FAM74A3Q4VXF1 159 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 SPANXN1Q5VSR9 72 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 NEXN-AS1Q8NBZ9 246 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 SMIM7Q9BQ49 75 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 MSRB1Q9NZV6 116 aa7.39□□□□□ -1.23
GCN1-202ENST00000547263 DNAH2Q9P225 4427 aa7.38□□□□□ -1.23
GCN1-202ENST00000547263 MUC21A0A0G2JKD1 596 aa7.38□□□□□ -1.23
GCN1-202ENST00000547263 MUC21A0A140T8X8 626 aa7.38□□□□□ -1.23
GCN1-202ENST00000547263 ZNF727A8MUV8 499 aa7.38□□□□□ -1.23
GCN1-202ENST00000547263 OSTCQ9NRP0 149 aa7.38□□□□□ -1.23
GCN1-202ENST00000547263 A0A087WWC5 75 aa7.37□□□□□ -1.23
GCN1-202ENST00000547263 FAM231BA6NCW3 169 aa7.37□□□□□ -1.23
GCN1-202ENST00000547263 IBA57-AS1B1ANH7 110 aa7.37□□□□□ -1.23
GCN1-202ENST00000547263 M0QY20 66 aa7.37□□□□□ -1.23
GCN1-202ENST00000547263 NTF3P20783 257 aa7.37□□□□□ -1.23
GCN1-202ENST00000547263 RPL36AP83881 106 aaKnown RBP7.37□□□□□ -1.23
GCN1-202ENST00000547263 C10orf126Q8N4M7 172 aa7.37□□□□□ -1.23
GCN1-202ENST00000547263 RPL36ALQ969Q0 106 aaKnown RBP7.37□□□□□ -1.23
GCN1-202ENST00000547263 ISOC2Q96AB3 205 aa7.37□□□□□ -1.23
GCN1-202ENST00000547263 GFRA4Q9GZZ7 299 aa7.37□□□□□ -1.23
GCN1-202ENST00000547263 TRAV9-2A0A087WT02 112 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 TRAV8-6A0A0B4J262 113 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 A8MWL6 223 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 GATCO43716 136 aaKnown RBP7.36□□□□□ -1.23
GCN1-202ENST00000547263 TRGC1P0CF51 173 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 EVI2AP22794 236 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 RPL23P62829 140 aaKnown RBP7.36□□□□□ -1.23
GCN1-202ENST00000547263 LAGE3Q14657 143 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 PEA15Q15121 130 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 V9GYV3 84 aa7.36□□□□□ -1.23
GCN1-202ENST00000547263 ERVFC1-1P60608 527 aa7.35□□□□□ -1.23
GCN1-202ENST00000547263 IFITM2Q01629 132 aa7.35□□□□□ -1.23
GCN1-202ENST00000547263 ZNF56Q15929 161 aa7.35□□□□□ -1.23
GCN1-202ENST00000547263 TMEM241Q24JQ0 296 aa7.35□□□□□ -1.23
GCN1-202ENST00000547263 NFE4Q86UQ8 179 aa7.35□□□□□ -1.23
GCN1-202ENST00000547263 NIT1Q86X76 327 aa7.35□□□□□ -1.23
GCN1-202ENST00000547263 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
GCN1-202ENST00000547263 DNAJC30Q96LL9 226 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms