RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SAMD10Q9BYL1 202 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.81
DDX54-203ENST00000546869 SACSQ9NZJ4 4579 aa10.01□□□□□ -0.81
DDX54-203ENST00000546869 FAM231BA6NCW3 169 aa10.01□□□□□ -0.81
DDX54-203ENST00000546869 A8MWL6 223 aa10.01□□□□□ -0.81
DDX54-203ENST00000546869 GZMBP10144 247 aa10.01□□□□□ -0.81
DDX54-203ENST00000546869 GYPEP15421 78 aa10.01□□□□□ -0.81
DDX54-203ENST00000546869 RPL23P62829 140 aaKnown RBP10.01□□□□□ -0.81
DDX54-203ENST00000546869 UPK3BQ9BT76 320 aa10.01□□□□□ -0.81
DDX54-203ENST00000546869 DNAH1Q9P2D7 4330 aa10.01□□□□□ -0.81
DDX54-203ENST00000546869 RYR2Q92736 4967 aa10□□□□□ -0.81
DDX54-203ENST00000546869 IGHV3-73A0A0B4J1V6 119 aa10□□□□□ -0.81
DDX54-203ENST00000546869 SRIP30626 198 aa10□□□□□ -0.81
DDX54-203ENST00000546869 CTRLP40313 264 aa10□□□□□ -0.81
DDX54-203ENST00000546869 LYZL1Q6UWQ5 148 aa10□□□□□ -0.81
DDX54-203ENST00000546869 ISOC2Q96AB3 205 aa10□□□□□ -0.81
DDX54-203ENST00000546869 GFRA4Q9GZZ7 299 aa10□□□□□ -0.81
DDX54-203ENST00000546869 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
DDX54-203ENST00000546869 RYR3Q15413 4870 aa9.99□□□□□ -0.81
DDX54-203ENST00000546869 TIRAPP58753 221 aa9.99□□□□□ -0.81
DDX54-203ENST00000546869 RAB4BP61018 213 aa9.99□□□□□ -0.81
DDX54-203ENST00000546869 LYPD5Q6UWN5 251 aa9.99□□□□□ -0.81
DDX54-203ENST00000546869 Q6ZSN1 163 aa9.99□□□□□ -0.81
DDX54-203ENST00000546869 ZNRF2Q8NHG8 242 aa9.99□□□□□ -0.81
DDX54-203ENST00000546869 KIF25-AS1Q9Y6Z4 181 aa9.99□□□□□ -0.81
DDX54-203ENST00000546869 NACAE9PAV3 2078 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 A0A087WWL8 130 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 TRBV10-1A0A0K0K1A3 114 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 FAM74A4Q5TZK3 123 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 UQCC3Q6UW78 93 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 C15orf54Q8N8G6 183 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 TSKUQ8WUA8 353 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 GTSF1Q8WW33 167 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 AP1S3Q96PC3 154 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 TPPP3Q9BW30 176 aa9.98□□□□□ -0.81
DDX54-203ENST00000546869 MUC21A0A0G2JKD1 596 aa9.97□□□□□ -0.81
DDX54-203ENST00000546869 MUC21A0A140T8X8 626 aa9.97□□□□□ -0.81
DDX54-203ENST00000546869 NTF3P20783 257 aa9.97□□□□□ -0.81
DDX54-203ENST00000546869 LINC00315P59091 139 aa9.97□□□□□ -0.81
DDX54-203ENST00000546869 V9GYV3 84 aa9.97□□□□□ -0.81
DDX54-203ENST00000546869 VPS13DQ5THJ4 4388 aa9.97□□□□□ -0.81
DDX54-203ENST00000546869 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
DDX54-203ENST00000546869 TRGC1P0CF51 173 aa9.96□□□□□ -0.82
DDX54-203ENST00000546869 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
DDX54-203ENST00000546869 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
DDX54-203ENST00000546869 ADIRFQ15847 76 aa9.96□□□□□ -0.82
DDX54-203ENST00000546869 Q6ZR54 194 aa9.96□□□□□ -0.82
DDX54-203ENST00000546869 C14orf178Q8N769 122 aaPredicted RBP9.96□□□□□ -0.82
DDX54-203ENST00000546869 Q9H8V8 135 aa9.96□□□□□ -0.82
DDX54-203ENST00000546869 MSRB1Q9NZV6 116 aa9.96□□□□□ -0.82
DDX54-203ENST00000546869 OR10G8Q8NGN5 311 aa9.95□□□□□ -0.82
DDX54-203ENST00000546869 HYDINQ4G0P3 5121 aa9.94□□□□□ -0.82
DDX54-203ENST00000546869 PNRC1Q12796 327 aaPredicted RBP9.94□□□□□ -0.82
DDX54-203ENST00000546869 ATP6V0E2Q8NHE4 81 aa9.94□□□□□ -0.82
DDX54-203ENST00000546869 HIGD1CA8MV81 97 aa9.93□□□□□ -0.82
DDX54-203ENST00000546869 EVI2AP22794 236 aa9.93□□□□□ -0.82
DDX54-203ENST00000546869 SSTP61278 116 aa9.93□□□□□ -0.82
DDX54-203ENST00000546869 TWIST1Q15672 202 aa9.93□□□□□ -0.82
DDX54-203ENST00000546869 ZNF56Q15929 161 aa9.93□□□□□ -0.82
DDX54-203ENST00000546869 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
DDX54-203ENST00000546869 DPH3P1Q9H4G8 78 aa9.93□□□□□ -0.82
DDX54-203ENST00000546869 KMT2AQ03164 3969 aa9.93□□□□□ -0.82
DDX54-203ENST00000546869 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 NBDYA0A0U1RRE5 68 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 LINC00862A6NCI5 91 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 GAGE12JA6NER3 117 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 K7EP13 123 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 BTF3P20290 206 aaKnown RBP9.92□□□□□ -0.82
DDX54-203ENST00000546869 RPL36AP83881 106 aaKnown RBP9.92□□□□□ -0.82
DDX54-203ENST00000546869 GAGE1Q13065 139 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 GAGE4Q13068 117 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 GAGE5Q13069 117 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 GAGE13Q4V321 117 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 RPL36ALQ969Q0 106 aaKnown RBP9.92□□□□□ -0.82
DDX54-203ENST00000546869 PGLYRP4Q96LB8 373 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 Q9UF83 564 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 NAT8BQ9UHF3 227 aa9.92□□□□□ -0.82
DDX54-203ENST00000546869 A0A1B0GUT8 65 aa9.91□□□□□ -0.82
DDX54-203ENST00000546869 SMIM27A0A1W2PRY6 76 aa9.91□□□□□ -0.82
DDX54-203ENST00000546869 TMEM218A2RU14 115 aa9.91□□□□□ -0.82
DDX54-203ENST00000546869 F5H697 171 aa9.91□□□□□ -0.82
DDX54-203ENST00000546869 H7C1H1 209 aa9.91□□□□□ -0.82
DDX54-203ENST00000546869 SIVA1O15304 175 aa9.91□□□□□ -0.82
DDX54-203ENST00000546869 FRZBQ92765 325 aa9.91□□□□□ -0.82
DDX54-203ENST00000546869 BORCS7Q96B45 105 aa9.91□□□□□ -0.82
DDX54-203ENST00000546869 A0A087WWC5 75 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 M0QY20 66 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 PPP1R2P9O14990 202 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 UBE2D3P61077 147 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 UBE2D2P62837 147 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 TTC32Q5I0X7 151 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 LELP1Q5T871 98 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 SMIM15Q7Z3B0 74 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 NUP35Q8NFH5 326 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 DNAJC30Q96LL9 226 aa9.9□□□□□ -0.82
DDX54-203ENST00000546869 IGLV2-18A0A075B6J9 118 aa9.89□□□□□ -0.83
DDX54-203ENST00000546869 ANAPC16Q96DE5 110 aa9.89□□□□□ -0.83
DDX54-203ENST00000546869 TRAV8-6A0A0B4J262 113 aa9.88□□□□□ -0.83
DDX54-203ENST00000546869 M0R2N4 97 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms